Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.200 GeneticVariation disease BEFREE Among brain tumors, the BRAF (V600E) mutation is frequently associated with pleomorphic xanthoastrocytomas (PXAs) and gangliogliomas (GGs). 26264609 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.200 GeneticVariation disease BEFREE An extensive literature search revealed that our patient is the fourth case of pigmented ganglioglioma described in the literature and was positive for BRAF V600E mutation by molecular studies. 26432496 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.200 GeneticVariation disease BEFREE As co-occurrence of H3 K27M and BRAF V600E mutations has been reported in midline tumors and anaplastic GG, we searched for BRAF V600E and H3 K27M mutations in a series of 54 paediatric midline grade I GG (midline GG) to determine the frequency of double mutations and its relevance for prognosis. 27984673 2018
Entrez Id: 1978
Gene Symbol: EIF4EBP1
EIF4EBP1
0.010 GeneticVariation disease BEFREE BRAF V600E mutation was identified in 30% of GGs; BRAF copy number gain was observed in 50% of them. p-S6 and p-4EBP1 immunopositivity was seen in 57% cases each. 28879901 2019
Entrez Id: 367
Gene Symbol: AR
AR
0.020 GeneticVariation disease BEFREE By using the human androgen receptor gene (HUMARA) assay, we found the ganglioglioma and the malignant component to be clonal in origin, suggestive of initial transformation of a single neuroglial precursor cell with subsequent malignant progression. 17259542 2007
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.200 GeneticVariation disease BEFREE Combined pleomorphic xanthoastrocytoma-ganglioglioma with BRAF V600E mutation: case report. 27015517 2016
Entrez Id: 79813
Gene Symbol: EHMT1
EHMT1
0.010 Biomarker disease BEFREE Constitutional tandem duplication of 9q34 that truncates EHMT1 in a child with ganglioglioma. 21681934 2012
Entrez Id: 3976
Gene Symbol: LIF
LIF
0.020 GeneticVariation disease BEFREE Desmoplastic infantile astrocytoma/ganglioglioma (DIA/DIG) is a rare primary neuroepithelial brain tumour typically affecting paediatric patients younger than 24 months. 23822828 2014
Entrez Id: 1730
Gene Symbol: DIAPH2
DIAPH2
0.020 GeneticVariation disease BEFREE Desmoplastic infantile astrocytoma/ganglioglioma (DIA/DIG) is a rare primary neuroepithelial brain tumour typically affecting paediatric patients younger than 24 months. 23822828 2014
Entrez Id: 3976
Gene Symbol: LIF
LIF
0.020 GeneticVariation disease BEFREE Desmoplastic infantile astrocytoma/ganglioglioma (DIA/DIG) are rare primary glioneuronal tumors that comprise 0.5% to 1.0% of all intracranial tumors. 29902580 2018
Entrez Id: 1730
Gene Symbol: DIAPH2
DIAPH2
0.020 GeneticVariation disease BEFREE Desmoplastic infantile astrocytoma/ganglioglioma (DIA/DIG) are rare primary glioneuronal tumors that comprise 0.5% to 1.0% of all intracranial tumors. 29902580 2018
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.010 Biomarker disease BEFREE Despite a detailed analysis, novel genetic alterations were limited to two fusion genes, EWSR1-PATZ1 and SLMAP-NTRK2, both in gangliogliomas. 26810070 2016
Entrez Id: 23598
Gene Symbol: PATZ1
PATZ1
0.010 Biomarker disease BEFREE Despite a detailed analysis, novel genetic alterations were limited to two fusion genes, EWSR1-PATZ1 and SLMAP-NTRK2, both in gangliogliomas. 26810070 2016
Entrez Id: 4915
Gene Symbol: NTRK2
NTRK2
0.020 Biomarker disease BEFREE Despite a detailed analysis, novel genetic alterations were limited to two fusion genes, EWSR1-PATZ1 and SLMAP-NTRK2, both in gangliogliomas. 26810070 2016
Entrez Id: 6505
Gene Symbol: SLC1A1
SLC1A1
0.010 Biomarker disease BEFREE Differential expression of 16 genes including glutamate transporter (EAAC1) and receptor (NMDA2C, mGluR5), growth factor (hepatocyte growth factor), and receptor (platelet derived growth factor receptor beta, fibroblast growth factor receptor 3) mRNAs was detected in GG neurons compared with control neurons. 17437409 2007
Entrez Id: 2915
Gene Symbol: GRM5
GRM5
0.010 AlteredExpression disease BEFREE Differential expression of 16 genes including glutamate transporter (EAAC1) and receptor (NMDA2C, mGluR5), growth factor (hepatocyte growth factor), and receptor (platelet derived growth factor receptor beta, fibroblast growth factor receptor 3) mRNAs was detected in GG neurons compared with control neurons. 17437409 2007
Entrez Id: 3082
Gene Symbol: HGF
HGF
0.010 AlteredExpression disease BEFREE Differential expression of 16 genes including glutamate transporter (EAAC1) and receptor (NMDA2C, mGluR5), growth factor (hepatocyte growth factor), and receptor (platelet derived growth factor receptor beta, fibroblast growth factor receptor 3) mRNAs was detected in GG neurons compared with control neurons. 17437409 2007
Entrez Id: 2261
Gene Symbol: FGFR3
FGFR3
0.010 AlteredExpression disease BEFREE Differential expression of 16 genes including glutamate transporter (EAAC1) and receptor (NMDA2C, mGluR5), growth factor (hepatocyte growth factor), and receptor (platelet derived growth factor receptor beta, fibroblast growth factor receptor 3) mRNAs was detected in GG neurons compared with control neurons. 17437409 2007
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.030 GeneticVariation disease BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542 2007
Entrez Id: 2158
Gene Symbol: F9
F9
0.010 GeneticVariation disease BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542 2007
Entrez Id: 5967
Gene Symbol: REG1A
REG1A
0.010 GeneticVariation disease BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542 2007
Entrez Id: 115482685
Gene Symbol: H3P13
H3P13
0.010 GeneticVariation disease BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542 2007
Entrez Id: 1032
Gene Symbol: CDKN2D
CDKN2D
0.010 GeneticVariation disease BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542 2007
Entrez Id: 51561
Gene Symbol: IL23A
IL23A
0.010 GeneticVariation disease BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542 2007
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 GeneticVariation disease BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542 2007