Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 GeneticVariation disease BEFREE The results of clinicopathologic analysis showed that A allele at the rs737241 locus could increase the expression level of AFP (P = .007), the rs1046282 mutation C allele could increase the AFP expression level (P = .011), rs4024 locus mutation A allele could reduce the risk of vascular invasion (P = .013), rs3212948 locus mutation T allele could reduce the differentiation of liver cancer (P = .022), rs1046282 locus C allele could reduce the DNA load of hepatitis B virus (P = .035), and rs735482 A allele could increase the tumor size in HCC (P = .037).The SNPs in rs737241 for AFP gene may correlate with the occurrence of HCC. 30946366 2019
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.100 GeneticVariation disease BEFREE Association of PTEN gene polymorphisms with liver cancer risk. 26823866 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE This study has identified some important novel ways in which WtHBx and MutHBx differentially interact with p53 and this could begin to form the cellular explanation for the association between this particular mutant and liver cancer. 21438026 2011
Entrez Id: 406906
Gene Symbol: MIR122
MIR122
0.100 GeneticVariation disease BEFREE The meta-analysis results showed that miR-let-7c Del, miR-34b/c C, and miR-122 Del variants may be associated with increased liver cancer risk. 25078599 2014
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.100 GeneticVariation disease BEFREE The liver cancer-specific signature 16, associated with alcohol, displays a unique feature of transcription-coupled damage and is the main source of CTNNB1 mutations. 29101368 2017
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 GeneticVariation disease BEFREE In this study, we evaluated the liver cancer-specific oncolytic potential of E1B 55kDa-deleted recombinant adenovirus (YKL-1001), which retained other E1 genes driven by the AFP promoter. 11911966 2002
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.090 GeneticVariation disease BEFREE COX-2 -899C carriers may have an increased risk for hepatitis B-related liver cancer. 22340386 2011
Entrez Id: 213
Gene Symbol: ALB
ALB
0.090 GeneticVariation disease BEFREE Using uni- and multi-variable analyses, we studied the albumin-bilirubin grade as a predictor of overall survival (OS) in a large, multi-center cohort of patients with HIV-associated HCC recruited from 44 centres in 9 countries within the Liver Cancer in HIV study group. 29034998 2018
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.090 GeneticVariation disease BEFREE No significant liver cancer and colorectal cancer risk of COX-2 -765G/C polymorphism was found. 24969885 2014
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.090 GeneticVariation disease BEFREE In our study, the rat liver cancer model was constructed by DEN treatment, TNFR2-Fc fusion protein variant (TNFR2-FcV) and TNF-α<sup>-/-</sup> rats were used to detect the role of TNF-α in liver injury and tumorigenesis. 29981431 2018
Entrez Id: 213
Gene Symbol: ALB
ALB
0.090 GeneticVariation disease BEFREE We have used various bioinformatics approaches to examine microarray expression profiles from liver neoplasms that arise in albumin-SV40 transgenic rats to elucidate genes, chromosome aberrations and pathways that might be associated with human liver cancer. 16026603 2005
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.090 GeneticVariation disease BEFREE COX-2 -765 C allele genotype, drinking history and family history of liver cancer may increase the susceptibility to hepatitis B-related liver cancer in Gansu province, China. 21800055 2012
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.090 GeneticVariation disease BEFREE Subgroup analysis of nine studies from Asian countries showed that there was a significant association between TNF-α 238 G/A polymorphism and increased risk of liver cancer in Asians (A vs. G, OR 1.35, 95% CI 1.03-1.76, P = 0.027, I(2) = 40.2%; AA/AG vs. GG, OR 1.56, 95% CI 1.14-2.15, P = 0.006, I(2) = 41.9%). 23943369 2014
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.090 GeneticVariation disease BEFREE Amplification-dependent overexpression of 64 known driver oncogenes were found in 587 tumors (40%); genes frequently observed were MYC (25%) and MET (18%) in colorectal cancer; SKP2 (21%) in lung squamous cell carcinoma; HIST1H3B (19%) and MYCN (13%) in liver cancer; KIT (57%) in gastrointestinal stromal tumors; and FOXL2 (12%) in squamous cell carcinoma across tissues. 28377632 2017
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.080 GeneticVariation disease BEFREE The purpose of the current investigation was to define the prevalence of genetic alterations in p16 and beta-catenin in NNK-induced rat liver cancer to determine if the molecular mechanisms seen in human tumors are the same in this animal model. 11238187 2001
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.080 GeneticVariation disease BEFREE The CCND1-ORAOV1-FGF19-FGF4-FGF3-TMEM16A-FADD-PPFIA1-CTTN (EMS1) locus at human chromosome 11q13.3 is amplified in head and neck tumors, esophageal cancer, Kaposi's sarcoma, bladder tumors, breast cancer, and liver cancer. 15942670 2005
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.070 GeneticVariation disease BEFREE COX-2 -899C carriers may have an increased risk for hepatitis B-related liver cancer. 22340386 2011
Entrez Id: 9940
Gene Symbol: DLEC1
DLEC1
0.070 GeneticVariation disease BEFREE The deleted in liver cancer (DLC-1) gene at chromosome 8p21-22 is altered mainly by genomic deletion or aberrant promoter methylation in a large number of human cancers such as breast, liver, colon and prostate and is known to have an inhibitory effect on breast and liver tumor cell growth. 14661059 2004
Entrez Id: 8655
Gene Symbol: DYNLL1
DYNLL1
0.070 GeneticVariation disease BEFREE We investigated the expression and deletion of DLC-1 (frequently deleted in liver cancer gene), first reported in 1998 and having a high homology with rat p122RhoGAP in hepatocellular carcinoma (HCC). 11118037 2000
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.070 GeneticVariation disease BEFREE COX-2 -765 C allele genotype, drinking history and family history of liver cancer may increase the susceptibility to hepatitis B-related liver cancer in Gansu province, China. 21800055 2012
Entrez Id: 8655
Gene Symbol: DYNLL1
DYNLL1
0.070 GeneticVariation disease BEFREE Further, the miRNA-target gene network analysis displayed that the deleted in liver cancer (DLC-1) gene, an important negative regulator for cell motility, was potentially targeted by several differentially expressed miRNAs in HBc-introduced cells. 28982593 2018
Entrez Id: 8655
Gene Symbol: DYNLL1
DYNLL1
0.070 GeneticVariation disease BEFREE The deleted in liver cancer (DLC-1) gene at chromosome 8p21-22 is altered mainly by genomic deletion or aberrant promoter methylation in a large number of human cancers such as breast, liver, colon and prostate and is known to have an inhibitory effect on breast and liver tumor cell growth. 14661059 2004
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.070 GeneticVariation disease BEFREE No significant liver cancer and colorectal cancer risk of COX-2 -765G/C polymorphism was found. 24969885 2014
Entrez Id: 9940
Gene Symbol: DLEC1
DLEC1
0.070 GeneticVariation disease BEFREE We investigated the expression and deletion of DLC-1 (frequently deleted in liver cancer gene), first reported in 1998 and having a high homology with rat p122RhoGAP in hepatocellular carcinoma (HCC). 11118037 2000
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.070 GeneticVariation disease BEFREE TGF-β1 polymorphisms and familial aggregation of liver cancer in Guangxi, China. 26345741 2015