Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7453
Gene Symbol: WARS1
WARS1
0.010 AlteredExpression disease BEFREE This study aimed to explore the influence of Tryptophanyl-tRNA synthetase (WARS) expression on the proliferation and migration of uveal melanoma (UM) cells, and the potential mechanisms. 31694485 2020
Entrez Id: 10352
Gene Symbol: WARS2
WARS2
0.010 AlteredExpression disease BEFREE This study aimed to explore the influence of Tryptophanyl-tRNA synthetase (WARS) expression on the proliferation and migration of uveal melanoma (UM) cells, and the potential mechanisms. 31694485 2020
Entrez Id: 6045
Gene Symbol: RNF2
RNF2
0.010 Biomarker disease BEFREE Thirty-two enucleated eyes with UM were stained immunohistochemically (BAP-1, laminin, CD31, and CD68) and with PAS without hematoxylin counterstain. 31588174 2019
Entrez Id: 11331
Gene Symbol: PHB2
PHB2
0.010 Biomarker disease BEFREE Uveal melanoma (UM) remains without effective therapy at the metastatic stage, which is associated with <i>BAP-1</i> (BRCA1 associated protein) mutations. 31146482 2019
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.010 Biomarker disease BEFREE Furthermore, the p52 protein could be used as a potential therapeutic biomarker for metastatic cases in uveal melanoma. 31612319 2019
Entrez Id: 4790
Gene Symbol: NFKB1
NFKB1
0.010 AlteredExpression disease BEFREE Activation of NFκB1/p50 was evaluated in 75 cases of uveal melanoma by immunohistochemistry. mRNA expression in 58 fresh UM specimen was measured by quantitative reverse-transcriptase PCR (qRT-PCR). 31533021 2019
Entrez Id: 10000
Gene Symbol: AKT3
AKT3
0.010 Biomarker disease BEFREE miR-224-5p inhibits proliferation, migration, and invasion by targeting PIK3R3/AKT3 in uveal melanoma. 30825222 2019
Entrez Id: 9113
Gene Symbol: LATS1
LATS1
0.010 Biomarker disease BEFREE We show that YAP/TAZ activation induced by Lats1/2 deletion cooperates with Kras to promote UM progression via downstream transcriptional reinforcement. 31801083 2019
Entrez Id: 3683
Gene Symbol: ITGAL
ITGAL
0.010 AlteredExpression disease BEFREE Finally, Mel202/DR1/CD80 uveal melanoma vaccine cells expressed the intercellular adhesion molecule 1 (ICAM-1) that was pivotal for CD4+ T cell activation via lymphocyte function-associated antigen 1(LFA-1). 30956760 2019
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.010 AlteredExpression disease BEFREE We first performed an immunostaining with the alpha-smooth muscle actin (αSMA) to localize activated HSteCs in UM liver macro-metastases from four patients. 31344830 2019
Entrez Id: 9759
Gene Symbol: HDAC4
HDAC4
0.010 Biomarker disease BEFREE Similarly, BAP1-deficient uveal melanoma cells are preferentially vulnerable to HDAC4 depletion. 31555735 2019
Entrez Id: 6502
Gene Symbol: SKP2
SKP2
0.010 AlteredExpression disease BEFREE <b>Materials and methods:</b> We analyzed the expressions of SKP2 in different UM cell lines compared with normal pigment cell by RNA-seq, RT-qPCR and Western blot. 31213847 2019
Entrez Id: 6336
Gene Symbol: SCN10A
SCN10A
0.010 Biomarker disease BEFREE Transcriptional inhibition by CDK7/9 inhibitor SNS-032 abrogates oncogene addiction and reduces liver metastasis in uveal melanoma. 31526394 2019
Entrez Id: 29890
Gene Symbol: RBM15B
RBM15B
0.010 Biomarker disease BEFREE BAP1 expression is prognostic in breast and uveal melanoma but not colon cancer and is highly positively correlated with RBM15B and USP19. 30716094 2019
Entrez Id: 728712
Gene Symbol: SPANXA2
SPANXA2
0.010 AlteredExpression disease BEFREE In conclusion, we found that SPANX-C expression could play a role in tumor progression of uveal melanoma. 31072624 2019
Entrez Id: 5971
Gene Symbol: RELB
RELB
0.010 AlteredExpression disease BEFREE Differential expression of p52 and RelB proteins in the metastatic and non-metastatic groups of uveal melanoma with patient outcome. 31612319 2019
Entrez Id: 4803
Gene Symbol: NGF
NGF
0.010 Biomarker disease BEFREE Interleukin 6, 8 (IL-6, IL-8, respectively), interferon-inducible protein-10 (IP-10), placental growth factor1 (PIGF1), regulated on activation, normal T Cell expressed and secreted (RANTES), monocyte chemoattractant protein-1 (MCP-1), nerve growth factor-beta (NGF-β), epidermal growth factor (EGF), basic fibroblast growth factor (bFGF), and vascular endothelia growth factor A (VEGF-A) were assessed by multiplex bead assay.In the study group, significantly higher concentrations of IL-6 (P = .006), IL-8 (P = .018), IP-10 (P = .004), RANTES (P = .008), MCP-1 (P = .02), NGF-β (P = .013), EGF (P < .001), PIGF1 (P = .01), bFGF (P = .016), and VEGF (P = .017) were measured, when compared with the control group.Several angiogenic, inflammatory, and chemotactic cytokines are highly expressed in the aqueous humor of the UM eyes, which provides new insights into the pathophysiology of UM and could be potential targets for treatment. 30702560 2019
Entrez Id: 8315
Gene Symbol: BRAP
BRAP
0.010 GeneticVariation disease BEFREE Uveal melanoma (UM) remains without effective therapy at the metastatic stage, which is associated with <i>BAP-1</i> (BRCA1 associated protein) mutations. 31146482 2019
Entrez Id: 64663
Gene Symbol: SPANXC
SPANXC
0.010 AlteredExpression disease BEFREE In conclusion, we found that SPANX-C expression could play a role in tumor progression of uveal melanoma. 31072624 2019
Entrez Id: 9474
Gene Symbol: ATG5
ATG5
0.010 Biomarker disease BEFREE <b>Abbreviations</b>: ADCD: autophagy dependent cell death; <i>ANXA2R</i>: annexin A2 receptor; <i>ATG12</i>: autophagy- related 12; <i>ATG5</i>: autophagy -related 5; ceRNA: competing endogenous RNAs; CQ: chloroquine; iTRAQ: isobaric tags for relative and absolute quantitation; lncRNA: long noncoding RNA; MAP1LC3/LC3: microtubule-associated protein 1 light chain 3; MTOR: mechanistic target of rapamycin kinase; MTORC1: MTOR complex 1; MTORC2: MTOR cmplex 2; PP242: Torkinib; RACE: rapid amplification of cDNA ends; <i>SQSTM1</i>/p62: sequestosome 1; UM: uveal melanoma. 31462126 2019
Entrez Id: 6901
Gene Symbol: TAZ
TAZ
0.010 Biomarker disease BEFREE Our data highlight the functional significance of Lats-YAP/TAZ in UM initiation and progression in vivo and suggest combination inhibition of YAP/TAZ and Ras/MAPK as a new therapeutic strategy for UM. 31801083 2019
Entrez Id: 2288
Gene Symbol: FKBP4
FKBP4
0.010 Biomarker disease BEFREE Furthermore, the p52 protein could be used as a potential therapeutic biomarker for metastatic cases in uveal melanoma. 31612319 2019
Entrez Id: 92737
Gene Symbol: DNER
DNER
0.010 GeneticVariation disease BEFREE Here, we evaluated the mechanisms of BETi resistance in uveal melanoma, a disease with little treatment options, using two approaches: a high-throughput combinatorial drug screen with the clinical BET inhibitor PLX51107 and RNA sequencing of BETi-resistant cells. 30885979 2019
Entrez Id: 574511
Gene Symbol: MIR506
MIR506
0.010 Biomarker disease BEFREE The majority of common miRNAs belonged to the miR‑506‑514 cluster, known to be involved in UM development. 30816460 2019
Entrez Id: 10869
Gene Symbol: USP19
USP19
0.010 Biomarker disease BEFREE BAP1 expression is prognostic in breast and uveal melanoma but not colon cancer and is highly positively correlated with RBM15B and USP19. 30716094 2019