Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.010 Biomarker phenotype BEFREE Among the enriched Gene Ontology Biological Process (GO BP) terms, actin cytoskeleton organization, actin filament-based process, and protein ubiquitination are associated with meat tenderness whereas cellular component organization, negative regulation of actin filament depolymerization and negative regulation of protein complex disassembly are involved in adipocyte regulation. 28183280 2017
Entrez Id: 89
Gene Symbol: ACTN3
ACTN3
0.010 GeneticVariation phenotype BEFREE There were no significant differences in MVC torque, ROM, and soreness between three genotype groups of ACTN3 R577X. 29165731 2018
Entrez Id: 501
Gene Symbol: ALDH7A1
ALDH7A1
0.010 Biomarker phenotype BEFREE Heifer carcasses from the high marbling EPD group had better (P < .05) ratings for juiciness, muscle fiber tenderness, and overall tenderness than the low marbling EPD group heifers. 8726733 1996
Entrez Id: 414
Gene Symbol: ARSD
ARSD
0.010 GeneticVariation phenotype BEFREE This study investigated the effectiveness of visible-near-infrared (VISNIR) spectroscopy at classifying Australian lamb for: a) ultimate pH (pH 24), b) meat tenderness (i.e. shear force at day 5 of ageing, SF5) and c) intramuscular fat (IMF) content at 24 h post-slaughter using a custom-made handheld probe coupled with the ASD Labspec Pro instrument. 31102991 2019
Entrez Id: 761
Gene Symbol: CA3
CA3
0.010 Biomarker phenotype BEFREE PIF analysis identified myoglobin (<i>MB</i>), enolase 3 (<i>ENO3</i>), and carbonic anhydrase 3 (<i>CA3</i>) as potentially having fundamental roles in tenderness. 30344530 2018
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE Two favorable CAPN1-4751 alleles increased tenderness of AT-striploin, TS-striploin, and rump steaks by 6.5, 4.3, and 3.9 units, and overall liking by 5.6, 3.1, and 4.1 units. 22367069 2012
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE Our results indicate that both calpain-1 and calpain-2 may contribute to the postmortem improvement of beef tenderness, with calpain-1 being responsible for the tenderness improvement early postmortem and calpain-2 responsible for additional tenderization during extended aging. 28527364 2017
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 Biomarker phenotype BEFREE Muscle color and marbling were affected by CAPN1 316 and E2FB and Warner-Bratzler meat tenderness by the former. 22818350 2012
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE The objective of this study was to evaluate the effects of seven single nucleotide polymorphisms (SNPs) in Calpain 1 and Calpastatin genes previously associated with meat tenderness attributes in other cattle breeds in Korean Hanwoo cattle. 24468663 2014
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 Biomarker phenotype BEFREE The eight SNP, which were located within five genes: mu-calpain (CAPN1), calpastatin (CAST), leptin (LEP), growth hormone receptor (GHR) and acylCoA:diacylglycerol acyltransferase 1 (DGAT1), are included in various commercial tests for tenderness, fatness, carcass composition and milk yield/quality. 19555501 2009
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 Biomarker phenotype BEFREE The micromolar calcium activated neutral protease <i>(CAPN1)</i> and calpastatin <i>(CAST)</i> have been widely regarded as genes related to muscle growth and meat tenderness. 28713829 2017
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 AlteredExpression phenotype BEFREE The present results suggest that meat tenderness in Nellore cattle does not directly depend on the expression of the CAPN1 and CAPN2 genes, but is associated with the expression of other genes such as CAST2, HSP90AA1, DNAJA1 and HSPB1. 29331838 2018
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 AlteredExpression phenotype BEFREE The improved tenderness in both prime and bull meat was associated with a lower myofibrillar fragmentation index and reduced calpain 1 activity which indicated the mechanism of tenderisation was different from that which occurred in chill aged meat. 29751219 2018
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 Biomarker phenotype BEFREE EB- or XR-irradiated samples showed slower autolysis of calpain-1; however, beef tenderness was not affected. 29107867 2018
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE Single nucleotide polymorphisms (SNPs) carried in calpain (CAPN1), calpastatin (CAST), and leptin (LEP) genes are associated with meat tenderness. 28525658 2017
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE Combining beef cattle data identified correlated SNPs representing CAPN1 (chr29:44 M+) and CAST (chr 7:96 M+) loci affecting beef tenderness, showing pleiotropic effects in dairy cattle. 28835686 2017
Entrez Id: 824
Gene Symbol: CAPN2
CAPN2
0.030 Biomarker phenotype BEFREE In conclusion, calcium chloride injection and freezing activate calpain-2 earlier postmortem in both muscles and calcium injection improves LL tenderness. 28889033 2018
Entrez Id: 824
Gene Symbol: CAPN2
CAPN2
0.030 AlteredExpression phenotype BEFREE The present results suggest that meat tenderness in Nellore cattle does not directly depend on the expression of the CAPN1 and CAPN2 genes, but is associated with the expression of other genes such as CAST2, HSP90AA1, DNAJA1 and HSPB1. 29331838 2018
Entrez Id: 824
Gene Symbol: CAPN2
CAPN2
0.030 Biomarker phenotype BEFREE Our results indicate that both calpain-1 and calpain-2 may contribute to the postmortem improvement of beef tenderness, with calpain-1 being responsible for the tenderness improvement early postmortem and calpain-2 responsible for additional tenderization during extended aging. 28527364 2017
Entrez Id: 825
Gene Symbol: CAPN3
CAPN3
0.010 GeneticVariation phenotype BEFREE Two favorable CAPN3 alleles improved rump steaks by 3.7, 3.3, 3.7, and 3.5 units, for tenderness, juiciness, liking the flavor, and overall liking. 22367069 2012
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE Single nucleotide polymorphisms (SNPs) carried in calpain (CAPN1), calpastatin (CAST), and leptin (LEP) genes are associated with meat tenderness. 28525658 2017
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE The CAPN1:c.1589G>A (Val530Ile) SNP marker displayed significant effect on the meat tenderness score which is strongly supported by molecular modeling of the CAPN1:c.1589G>A (Val530Ile) variant that inhibits CAST protein from binding more strongly than the wild-type protein, which may explain its effect on meat tenderness. 24468663 2014
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE Out of these, the LD-block 3 in calpastatin, tagged by SNPs located at 7-98566391 and 7-98581038, had a significant effect on tenderness with the TG-CG diplotype being approximately 1 kg more tender than the toughest diplotype, TG-CG. 29520298 2018
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 AlteredExpression phenotype BEFREE In conclusion, ZH supplementation improved hypertrophy, meat production, and debone yield in Nellore heifers, which led to decreased tenderness and to increased mRNA expression in the calpain-calpastatin system. 27427783 2016
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 AlteredExpression phenotype BEFREE Younger slaughter age and lower calpastatin activity both resulted in greater tenderness (P < .05). 8707712 1996