Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1392
Gene Symbol: CRH
CRH
0.010 Biomarker disease BEFREE Our data confirm for the first time a definite association of heterozygous COL4A3/COL4A4 mutations with familial microscopic haematuria, thin basement membrane nephropathy and the late development of familial proteinuria, CRF, and ESRD, due to FSGS, indicating that the term 'benign familial haematuria' is a misnomer, at least in this cohort. 19357112 2009
Entrez Id: 10882
Gene Symbol: C1QL1
C1QL1
0.010 Biomarker disease BEFREE Our data confirm for the first time a definite association of heterozygous COL4A3/COL4A4 mutations with familial microscopic haematuria, thin basement membrane nephropathy and the late development of familial proteinuria, CRF, and ESRD, due to FSGS, indicating that the term 'benign familial haematuria' is a misnomer, at least in this cohort. 19357112 2009
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.010 AlteredExpression disease BEFREE In addition, levels of PTCH (patched) mRNA were increased relative to unremarkable epidermis in familial BFH lesions but to a lesser degree and in a different pattern than that seen in BCC. 12652194 2003
Entrez Id: 5111
Gene Symbol: PCNA
PCNA
0.010 Biomarker disease BEFREE Immunohistochemical staining for the proliferation markers proliferating cell nuclear antigen and Ki-67 demonstrated less staining in BFH than in BCC. 12652194 2003
Entrez Id: 6387
Gene Symbol: CXCL12
CXCL12
0.010 GeneticVariation disease BEFREE On electron microscopy, thickness of the glomerular basement membrane (BGM) was found to distinguish benign familial hematuria (BFH - 10 cases) from non familial idiopathic recurrent hematuria (IRH - 9 cases). 7055992 1982
Entrez Id: 3476
Gene Symbol: IGBP1
IGBP1
0.020 GeneticVariation disease BEFREE Previous studies have indicated that mutation of type IV collagen alpha4 gene may be responsible for both BFH and AS. 14524583 2003
Entrez Id: 3476
Gene Symbol: IGBP1
IGBP1
0.020 GeneticVariation disease BEFREE Benign familial hematuria due to mutation of the type IV collagen alpha4 gene. 8787673 1996
Entrez Id: 654841
Gene Symbol: MFF-DT
MFF-DT
0.100 GeneticVariation disease CLINVAR The clinical spectrum of type IV collagen mutations. 9195222 1997
Entrez Id: 654841
Gene Symbol: MFF-DT
MFF-DT
0.100 CausalMutation disease CLINVAR
Entrez Id: 7827
Gene Symbol: NPHS2
NPHS2
0.300 Biomarker disease GENOMICS_ENGLAND Co-Inheritance of Functional Podocin Variants with Heterozygous Collagen IV Mutations Predisposes to Renal Failure. 26138234 2015
Entrez Id: 1287
Gene Symbol: COL4A5
COL4A5
0.340 GeneticVariation disease BEFREE COL4A5 mutations are associated with the major X-linked form of the disease, and COL4A3 and COL4A4 mutations are associated with autosomal recessive and dominant forms (thought to be involved in 15% and 1%-5% of the families, respectively) and benign familial hematuria. 24854265 2014
Entrez Id: 1287
Gene Symbol: COL4A5
COL4A5
0.340 Biomarker disease BEFREE This result suggests that COL4A5 should be added to the list of causative genes for benign familial hematuria, although the mechanism(s) by which the same mutation leads to the distinct phenotypes, i.e. 19937058 2010
Entrez Id: 1287
Gene Symbol: COL4A5
COL4A5
0.340 GeneticVariation disease BEFREE This study involved screening each exon with boundary intronic sequences of COL4A3, COL4A4, and COL4A5 genes by optimized polymerase chain reaction-single-stranded conformational polymorphism analysis in 17 families with ATS and in 40 families diagnosed as having BFH. 17396119 2007
Entrez Id: 1287
Gene Symbol: COL4A5
COL4A5
0.340 GeneticVariation disease BEFREE This study confirms that persistent familial hematuria is not always linked to COL4A3/COL4A4 (or COL4A5) and suggests the possibility of a further genetic locus for benign familial hematuria. 16235097 2005
Entrez Id: 1287
Gene Symbol: COL4A5
COL4A5
0.340 Biomarker disease GENOMICS_ENGLAND "X-linked Alport syndrome: natural history and genotype-phenotype correlations in girls and women belonging to 195 families: a ""European Community Alport Syndrome Concerted Action"" study." 14514738 2003
Entrez Id: 1285
Gene Symbol: COL4A3
COL4A3
0.800 GeneticVariation disease BEFREE As regards to Alport syndrome, we were able to potentially reclassify a pathogenic allele in the COL4A3 gene, previously associated only with benign familial hematuria. 31387071 2019
Entrez Id: 1286
Gene Symbol: COL4A4
COL4A4
0.800 GeneticVariation disease BEFREE This result suggests that COL4A3 and COL4A4 digenic mutations in cis mimicking an autosomal dominant inheritance should be considered as a novel inheritance pattern of benign familial hematuria, although the disease-causing mechanism remains unknown. 29742505 2018
Entrez Id: 1285
Gene Symbol: COL4A3
COL4A3
0.800 GeneticVariation disease BEFREE Using bioinformatics analyses and pedigree verification, we showed that COL4A4 c.1471C>T and COL4A3 c.3418 + 1G>T variants in cis are pathogenic and co-segregate with the benign familial hematuria. 29742505 2018
Entrez Id: 1285
Gene Symbol: COL4A3
COL4A3
0.800 GeneticVariation disease BEFREE COL4A5 mutations are associated with the major X-linked form of the disease, and COL4A3 and COL4A4 mutations are associated with autosomal recessive and dominant forms (thought to be involved in 15% and 1%-5% of the families, respectively) and benign familial hematuria. 24854265 2014
Entrez Id: 1286
Gene Symbol: COL4A4
COL4A4
0.800 GeneticVariation disease BEFREE COL4A5 mutations are associated with the major X-linked form of the disease, and COL4A3 and COL4A4 mutations are associated with autosomal recessive and dominant forms (thought to be involved in 15% and 1%-5% of the families, respectively) and benign familial hematuria. 24854265 2014
Entrez Id: 1285
Gene Symbol: COL4A3
COL4A3
0.800 Biomarker disease GENOMICS_ENGLAND Whole exome sequencing reveals novel COL4A3 and COL4A4 mutations and resolves diagnosis in Chinese families with kidney disease. 25381091 2014
Entrez Id: 1286
Gene Symbol: COL4A4
COL4A4
0.800 Biomarker disease GENOMICS_ENGLAND COL4A3/COL4A4 mutations and features in individuals with autosomal recessive Alport syndrome. 24052634 2013
Entrez Id: 1285
Gene Symbol: COL4A3
COL4A3
0.800 Biomarker disease GENOMICS_ENGLAND COL4A3/COL4A4 mutations and features in individuals with autosomal recessive Alport syndrome. 24052634 2013
Entrez Id: 1285
Gene Symbol: COL4A3
COL4A3
0.800 GeneticVariation disease BEFREE Gene mutations in COL4A5 located on Xq22 are believed to cause X-linked Alport syndrome, whereas mutations in COL4A3 and COL4A4 located on chromosome 2 are associated with autosomal inherited Alport syndrome or benign familial hematuria. 19937058 2010
Entrez Id: 1286
Gene Symbol: COL4A4
COL4A4
0.800 GeneticVariation disease BEFREE Gene mutations in COL4A5 located on Xq22 are believed to cause X-linked Alport syndrome, whereas mutations in COL4A3 and COL4A4 located on chromosome 2 are associated with autosomal inherited Alport syndrome or benign familial hematuria. 19937058 2010