Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.070 GeneticVariation disease BEFREE We transfected these contructs into the COS-1 or MCT cells, and the results revealed that the HOA-related matrilin-3 mutation (T298M) leads to a high expression level of growth arrest DNA damage-inducible gene 153 (GADD153, also known as CHOP; an endoplasmic reticulum stress marker), as shown by western blot analysis and does not significantly affect protein secretion, as shown by immunofluorescence staining; however, osteochondroplasia, i.e., MED-related (R116W) and SEMD-related (C299S) mutations lead to both high levels of GADD153 expression and protein trafficking into the cytoplasm and form multiple vacuoles in cells, which in turn leads to insufficient protein secretion. 26499313 2015
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.070 GeneticVariation disease BEFREE Genomewide scan for hand osteoarthritis: a novel mutation in matrilin-3. 12736871 2003
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.070 GeneticVariation disease BEFREE Seven polymorphisms in the matrilin-3(MATN3) gene were previously tested for genetic association with hand osteoarthritis in an Icelandic cohort. 16396979 2006
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.070 GeneticVariation disease BEFREE Matrilin-3 mutations that cause chondrodysplasias interfere with protein trafficking while a mutation associated with hand osteoarthritis does not. 16199550 2005
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.070 GeneticVariation disease BEFREE Patients carrying the T(303)M mutation in the gene for matrilin-3 express a form of HOA that is radiologically indistinguishable from idiopathic HOA in individual patients but they have more severe thumb-base involvement, particularly in the STT joint. 16641049 2006
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.070 GeneticVariation disease BEFREE However, mutations in matrilin-3 in humans cause different forms of chondrodysplasias and perhaps also hand osteoarthritis. 15943978 2005
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.070 GeneticVariation disease BEFREE The T303M polymorphism of the MATN3 gene, which was initially described as associated with hand osteoarthritis, may be more closely linked to trapeziometacarpal osteoarthritis than to digital osteoarthritis. 20971668 2011
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 GeneticVariation disease BEFREE Association of erosive hand osteoarthritis with a single nucleotide polymorphism on the gene encoding interleukin-1 beta. 12801479 2003
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 GeneticVariation disease BEFREE Potential influence of IL1B haplotype and IL1A-IL1B-IL1RN extended haplotype on hand osteoarthritis risk. 17532232 2007
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 GeneticVariation disease BEFREE A total of 259 HOA patients with total hip replacement (THR) and 518 healthy blood donors as controls were genotyped for IL1B gene SNP -511(G>A) and the VNTR in the IL1RN gene associated with HOA. 21671260 2011
Entrez Id: 152100
Gene Symbol: CMC1
CMC1
0.030 GeneticVariation disease BEFREE With respect to the CMC1 OA group, two SNPs in IL-4 (rs2243250 and rs2243274) showed association with a P-value of 0.027 and 0.018 respectively. 20219689 2010
Entrez Id: 3077
Gene Symbol: HFE
HFE
0.020 GeneticVariation disease BEFREE There was also a suggestive interaction between the HFE rs179945 and the ESR1 rs9340799, and the carriage of the minor allele of either of these SNPs was associated with an increased risk of symptomatic DIP OA (2.1, 1.3-2.5). 24825461 2014
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.020 GeneticVariation disease BEFREE COL2A1 gene polymorphisms and susceptibility to osteoarthritis of the hand in Finnish women. 19019890 2009
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.020 GeneticVariation disease BEFREE Matrix Gla protein polymorphism, but not concentrations, is associated with radiographic hand osteoarthritis. 21724703 2011
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.020 GeneticVariation disease BEFREE Nevertheless, association studies of affected sibling pairs and nuclear families, using candidate gene and genome wide screening and transmission disequilibrium testing, suggest no association with candidates such as COL2A1 (responsible for some rare monogenic syndromes of premature generalized OA) but possible associations, currently not isolated, on chromosome 2q. 11156501 2000
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.020 GeneticVariation disease BEFREE None of the haplotypes IL1B -511(G>A) and IL1RN (VNTR) were found associated with the HOA. 21671260 2011
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.020 GeneticVariation disease BEFREE Variations in the TNFα gene and their interactions with the IL4R and IL10 genes in relation to hand osteoarthritis. 25252624 2014
Entrez Id: 100188011
Gene Symbol: DIP
DIP
0.020 GeneticVariation disease BEFREE Daughters whose mothers had hand OA (i.e., OA at either the carpometacarpal [CMC] or distal interphalageal [DIP] joints) had significantly higher mean BMD, when adjusted for body mass index (BMI) (5.1%-8.1%, p < 0.05), at all hip regions except the trochanter. 11792599 2002
Entrez Id: 100188011
Gene Symbol: DIP
DIP
0.020 GeneticVariation disease BEFREE We found an interaction between ESR1 (rs9340799) and occupation: teachers with the minor allele were at an increased risk of symptomatic DIP OA (2.8, 1.3-6.5). 24825461 2014
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.020 GeneticVariation disease BEFREE Of the SNPs, rs716508 in A2BP1 was associated with ROA (OR = 0.7, 95% CI 0.5-0.9) and rs1800470 in TGFB1 with symptomatic DIP OA (1.8, 1.2-2.9). 24825461 2014
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.020 GeneticVariation disease BEFREE Potential influence of IL1B haplotype and IL1A-IL1B-IL1RN extended haplotype on hand osteoarthritis risk. 17532232 2007
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.020 GeneticVariation disease BEFREE Our findings suggest that HOA in Croatian population might have a different genetic risk regarding the IL1 locus than has been reported for other Caucasian populations previously. 21671260 2011
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.020 GeneticVariation disease BEFREE TNF inhibitor treatment is associated with a lower risk of hand osteoarthritis progression in rheumatoid arthritis patients after 10 years. 29471377 2018
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.020 GeneticVariation disease BEFREE Vitamin D receptor gene polymorphisms and osteoarthritis of the hand, hip, and knee: acase-control study in Japan. 10662878 2000
Entrez Id: 3077
Gene Symbol: HFE
HFE
0.020 GeneticVariation disease BEFREE The HFE H63D variant may explain, at least in part, the prevalence of arthralgia in multiple joints sites, chondrocalcinosis, and hand osteoarthritis in the general population. 17284543 2007