Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.020 AlteredExpression disease BEFREE Vascular endothelial growth factor (VEGF) expression in the subacromial bursa is increased in patients with impingement syndrome. 11398859 2001
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 AlteredExpression disease BEFREE We analyzed expressions of IL-1beta, IL-6, and TNF-alpha in subacromial bursa and joint fluid collected from 14 patients with cuff tears with stiffness as a study group (Group I) and 14 patients with rotator cuff tears without shoulder stiffness as a control group (Group II) using real-time RT-PCR, immunohistochemistry, and ELISA. 18327798 2008
Entrez Id: 3251
Gene Symbol: HPRT1
HPRT1
0.010 Biomarker disease BEFREE HPRT1+TBP+ACTB seems to be the best combination of reference genes for the analysis of involving different tendon samples of individuals with rotator cuff tears. 25768100 2015
Entrez Id: 2103
Gene Symbol: ESRRB
ESRRB
0.010 Biomarker disease BEFREE The purpose of the present study was to confirm the association between multiple candidate genes, including ESRRB, and rotator cuff disease in an independent set of patients with rotator cuff tear. 25219474 2015
Entrez Id: 2200
Gene Symbol: FBN1
FBN1
0.010 Biomarker disease BEFREE This is the first study to confirm the localization of type VI collagen, elastin and fibrillin-1 in the pericellular region of human supraspinatus tendon and assesses the effect of tendon degeneration on these structures, thus providing a useful insight into the composition of human rotator cuff tears which can be instrumental in predicting disease prognosis. 25166893 2015
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.010 Biomarker disease BEFREE HPRT1+TBP+ACTB seems to be the best combination of reference genes for the analysis of involving different tendon samples of individuals with rotator cuff tears. 25768100 2015
Entrez Id: 6908
Gene Symbol: TBP
TBP
0.010 Biomarker disease BEFREE HPRT1+TBP+ACTB seems to be the best combination of reference genes for the analysis of involving different tendon samples of individuals with rotator cuff tears. 25768100 2015
Entrez Id: 29115
Gene Symbol: SAP30BP
SAP30BP
0.100 GeneticVariation disease GWASCAT Genome-wide association study for rotator cuff tears identifies two significant single-nucleotide polymorphisms. 26350878 2016
Entrez Id: 23328
Gene Symbol: SASH1
SASH1
0.100 GeneticVariation disease GWASCAT Genome-wide association study for rotator cuff tears identifies two significant single-nucleotide polymorphisms. 26350878 2016
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.020 AlteredExpression disease BEFREE Patients with full-thickness rotator cuff tears have greater levels of synovial inflammation, angiogenesis, and MMP-3 upregulation compared with controls. 26775747 2016
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 GeneticVariation disease BEFREE To assess the effects of PRP on tenocytes from degenerative rotator cuff tears with the concomitant use of a corticosteroid in interleukin 1β (IL-1β)-induced tendinopathic conditions. 28061032 2017
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.020 GeneticVariation disease BEFREE (2) Are there haplotypes of MMP-1 and MMP-3 correlated with rotator cuff tears? 28160256 2017
Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
0.020 Biomarker disease BEFREE FABP4 transcription is regulated by the direct binding of HIF1 to the FABP4 promoter in the hypoxic condition induced by RCT. 28382782 2017
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.020 Biomarker disease BEFREE (2) Are there haplotypes of MMP-1 and MMP-3 correlated with rotator cuff tears? 28160256 2017
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.020 Biomarker disease BEFREE Taken together, the present study presents a reliable fatty infiltration mouse model and suggests a key role for PDGFRα-positive mesenchymal stem cells in the process of fatty infiltration after RCT in humans. 28139720 2017
Entrez Id: 2167
Gene Symbol: FABP4
FABP4
0.020 Biomarker disease BEFREE To investigate potential mechanisms for fatty infiltration other than adipogenic differentiation of muscle stem cells, we examined the role of FABP4 in muscle fatty infiltration in an RCT mouse model. 28382782 2017
Entrez Id: 3371
Gene Symbol: TNC
TNC
0.020 Biomarker disease BEFREE Candidate gene approach identifies six SNPs in tenascin-C (TNC) associated with degenerative rotator cuff tears. 27248364 2017
Entrez Id: 3371
Gene Symbol: TNC
TNC
0.020 GeneticVariation disease BEFREE Several single-nucleotide polymorphisms (SNPs) in the TNC gene have recently been found to be associated with degenerative rotator cuff tears. 28952802 2017
Entrez Id: 722
Gene Symbol: C4BPA
C4BPA
0.010 Biomarker disease BEFREE A murine myogenic cell line and a rat rotator cuff tear model were used in this study and PRP was administrated into subacromial space which is widely used in clinical practice. 27684960 2017
Entrez Id: 2232
Gene Symbol: FDXR
FDXR
0.010 Biomarker disease BEFREE Thirty consecutive elderly patients with irreparable RCTs were prospectively enrolled and taught how to perform the home-based ADR program for a period of 3 months. 28483431 2017
Entrez Id: 142
Gene Symbol: PARP1
PARP1
0.010 Biomarker disease BEFREE Neer Award 2016: reduced muscle degeneration and decreased fatty infiltration after rotator cuff tear in a poly(ADP-ribose) polymerase 1 (PARP-1) knock-out mouse model. 28131694 2017
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.010 Biomarker disease BEFREE A murine myogenic cell line and a rat rotator cuff tear model were used in this study and PRP was administrated into subacromial space which is widely used in clinical practice. 27684960 2017
Entrez Id: 29072
Gene Symbol: SETD2
SETD2
0.010 Biomarker disease BEFREE FABP4 transcription is regulated by the direct binding of HIF1 to the FABP4 promoter in the hypoxic condition induced by RCT. 28382782 2017
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 AlteredExpression disease BEFREE The intra-articular IL-8 level is associated with resting pain in rotator cuff tear patients. 25930944 2017
Entrez Id: 5621
Gene Symbol: PRNP
PRNP
0.010 Biomarker disease BEFREE A murine myogenic cell line and a rat rotator cuff tear model were used in this study and PRP was administrated into subacromial space which is widely used in clinical practice. 27684960 2017