Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 22954
Gene Symbol: TRIM32
TRIM32
0.100 Biomarker group HPO
Entrez Id: 80184
Gene Symbol: CEP290
CEP290
0.100 CausalMutation group CLINVAR
Entrez Id: 174
Gene Symbol: AFP
AFP
0.010 Biomarker group BEFREE This case illustrates the potential severity of the renal anomalies in the BOR syndrome and the inadequacy of oligohydramnios and maternal serum alpha-fetoprotein as screening methods for renal agenesis. 6846397 1983
Entrez Id: 7490
Gene Symbol: WT1
WT1
0.010 GeneticVariation group BEFREE Although a specific set of mutational sites has been observed in Drash patients, these findings suggest that the loss of one copy of the WT1 gene can result in similar genital and kidney abnormalities. 7688557 1993
Entrez Id: 5076
Gene Symbol: PAX2
PAX2
0.040 Biomarker group BEFREE In a recent report, deregulation of expression of the gene coding for the Pax-2 DNA-binding protein was shown to generate severe kidney abnormalities in transgenic mice resembling the clinical and pathological findings in congenital nephrotic syndrome, making it a candidate gene for CNF. 8188301 1994
Entrez Id: 5076
Gene Symbol: PAX2
PAX2
0.040 GeneticVariation group BEFREE Recently, we reported a mutation of PAX2 in patients with optic nerve coloboma, vesicoureteric reflux, and renal anomalies. 8661132 1996
Entrez Id: 1080
Gene Symbol: CFTR
CFTR
0.030 Biomarker group BEFREE CFTR abnormalities are rarely detected in men with congenital absence of the vas deferens and renal anomalies. 8627844 1996
Entrez Id: 28954
Gene Symbol: REM1
REM1
0.010 Biomarker group BEFREE Significant findings include otolaryngologic abnormalities in 94%, eye abnormalities in 85%, sleep abnormalities (especially reduced REM sleep) in 75%, hearing impairment in 68% (approximately 65% conductive and 35% sensorineural), scoliosis in 65%, brain abnormalities (predominantly ventriculomegaly) in 52%, cardiac abnormalities in at least 37%, renal anomalies (especially duplication of the collecting system) in 35%, low thyroxine levels in 29%, low immunoglobulin levels in 23%, and forearm abnormalities in 16%. 8882782 1996
Entrez Id: 5076
Gene Symbol: PAX2
PAX2
0.040 AlteredExpression group BEFREE Although renal-coloboma syndrome involves both ocular and renal anomalies, some patients are affected with vesico-ureteral reflux (VUR), high frequency hearing loss, central nervous system (CNS) anomalies, and/or genital anomalies, consistent with the expression of PAX2 in these tissues during development. 10466411 1999
Entrez Id: 5979
Gene Symbol: RET
RET
0.030 AlteredExpression group BEFREE Ganglioneuromas and renal anomalies are induced by activated RET(MEN2B) in transgenic mice. 10023663 1999
Entrez Id: 5979
Gene Symbol: RET
RET
0.030 GeneticVariation group BEFREE Although kidney agenesis or dysgenesis has been observed in mice lacking functional ret, no clinically relevant kidney abnormalities have been reported in individuals with known RET mutations and familial medullary thyroid carcinoma (FMTC). 11454140 2001
Entrez Id: 55278
Gene Symbol: QRSL1
QRSL1
0.010 AlteredExpression group BEFREE Recently, a member of the GATA-binding family of transcription factors was shown to be involved in the human hypoparathyroidism, sensorineural deafness and renal anomalies (HDR) syndrome. 11577985 2001
Entrez Id: 1080
Gene Symbol: CFTR
CFTR
0.030 GeneticVariation group BEFREE CUAVD is important because of its association with renal anomalies and cystic fibrosis transmembrane conductance regulator gene mutations. 12475673 2002
Entrez Id: 5076
Gene Symbol: PAX2
PAX2
0.040 GeneticVariation group BEFREE The genetic bases of most forms of uveoretinal coloboma are elusive; mutations in PAX2 are found in only a few cases of coloboma of the retina and optic nerve that occur with renal anomalies as part of the renal-coloboma syndrome (MIM#120330; #167409). 12503095 2003
Entrez Id: 6928
Gene Symbol: HNF1B
HNF1B
0.040 GeneticVariation group BEFREE TCF2 anomalies were associated with bilateral renal anomalies (P < 0.001) and bilateral cortical cysts (P < 0.001). 16371430 2006
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
0.020 GeneticVariation group BEFREE A novel mutation in the GATA3 gene in a family with HDR syndrome (Hypoparathyroidism, sensorineural Deafness and Renal anomaly syndrome). 16509533 2006
Entrez Id: 5979
Gene Symbol: RET
RET
0.030 GeneticVariation group BEFREE These data suggest that in humans, mutations in RET and GDNF may contribute significantly to abnormal kidney development. 18252215 2008
Entrez Id: 2668
Gene Symbol: GDNF
GDNF
0.010 GeneticVariation group BEFREE These data suggest that in humans, mutations in RET and GDNF may contribute significantly to abnormal kidney development. 18252215 2008
Entrez Id: 4010
Gene Symbol: LMX1B
LMX1B
0.010 Biomarker group BEFREE Previous phenotype studies of Lmx1b null mice revealed dorsal limb and renal anomalies similar to human NPS, which contributed to the identification of heterozygous mutations in this LIM-homeodomain protein LMX1B as the genetic defect responsible for NPS. 18414507 2008
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.010 GeneticVariation group BEFREE Mutations in the transcription factor encoding TFAP2A gene underlie branchio-oculo-facial syndrome (BOFS), a rare dominant disorder characterized by distinctive craniofacial, ocular, ectodermal and renal anomalies. 19685247 2009
Entrez Id: 9757
Gene Symbol: KMT2B
KMT2B
0.020 Biomarker group BEFREE MLL2 mutation carriers significantly more often presented with short stature and renal anomalies (p = 0.026 and 0.031, respectively), and in addition, MLL2 carriers obviously showed more frequently a typical facial gestalt (17/19) compared with non-carriers (9/15), although this result was not statistically significant (p = 0.1). 21607748 2011
Entrez Id: 8085
Gene Symbol: KMT2D
KMT2D
0.020 Biomarker group BEFREE MLL2 mutation carriers significantly more often presented with short stature and renal anomalies (p = 0.026 and 0.031, respectively), and in addition, MLL2 carriers obviously showed more frequently a typical facial gestalt (17/19) compared with non-carriers (9/15), although this result was not statistically significant (p = 0.1). 21607748 2011
Entrez Id: 8085
Gene Symbol: KMT2D
KMT2D
0.020 GeneticVariation group BEFREE The clinical characteristics of MLL2 mutation-positive cases did not differ significantly from MLL2 mutation-negative cases with the exception that renal anomalies were more common in MLL2 mutation-positive cases. 21671394 2011
Entrez Id: 9757
Gene Symbol: KMT2B
KMT2B
0.020 GeneticVariation group BEFREE The clinical characteristics of MLL2 mutation-positive cases did not differ significantly from MLL2 mutation-negative cases with the exception that renal anomalies were more common in MLL2 mutation-positive cases. 21671394 2011
Entrez Id: 3784
Gene Symbol: KCNQ1
KCNQ1
0.010 Biomarker group BEFREE Morpholino knockdown of kcnq1 in the zebrafish resulted in abnormal kidney development and filtration capacity. 21931561 2011