Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4886
Gene Symbol: NPY1R
NPY1R
0.300 Biomarker disease CTD_human Gastrointestinal hormones (anorexigenic peptide YY and orexigenic ghrelin) influence neural tube development. 17400914 2007
Entrez Id: 4522
Gene Symbol: MTHFD1
MTHFD1
0.300 Biomarker disease CTD_human Confirmation of the R653Q polymorphism of the trifunctional C1-synthase enzyme as a maternal risk for neural tube defects in the Irish population. 16552426 2006
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.300 Therapeutic disease CTD_human Valproic acid-induced fetal malformations are reduced by maternal immune stimulation with granulocyte-macrophage colony-stimulating factor or interferon-gamma. 17075842 2006
Entrez Id: 635
Gene Symbol: BHMT
BHMT
0.300 Biomarker disease CTD_human Neural tube defects and folate pathway genes: family-based association tests of gene-gene and gene-environment interactions. 17035141 2006
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.300 Therapeutic disease CTD_human Valproic acid-induced fetal malformations are reduced by maternal immune stimulation with granulocyte-macrophage colony-stimulating factor or interferon-gamma. 17075842 2006
Entrez Id: 2737
Gene Symbol: GLI3
GLI3
0.300 Biomarker disease CTD_human Exencephaly induction by valproic acid in the genetic polydactyly/arhinencephaly mouse, Pdn/Pdn. 16359493 2005
Entrez Id: 85416
Gene Symbol: ZIC5
ZIC5
0.300 Biomarker disease CTD_human Mouse Zic5 deficiency results in neural tube defects and hypoplasia of cephalic neural crest derivatives. 15136147 2004
Entrez Id: 7546
Gene Symbol: ZIC2
ZIC2
0.300 Biomarker disease CTD_human Mouse Zic5 deficiency results in neural tube defects and hypoplasia of cephalic neural crest derivatives. 15136147 2004
Entrez Id: 4522
Gene Symbol: MTHFD1
MTHFD1
0.300 Biomarker disease CTD_human A polymorphism, R653Q, in the trifunctional enzyme methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase/formyltetrahydrofolate synthetase is a maternal genetic risk factor for neural tube defects: report of the Birth Defects Research Group. 12384833 2002
Entrez Id: 2350
Gene Symbol: FOLR2
FOLR2
0.300 Biomarker disease CTD_human Arsenic-induced congenital malformations in genetically susceptible folate binding protein-2 knockout mice. 11749123 2001
Entrez Id: 6240
Gene Symbol: RRM1
RRM1
0.300 Biomarker disease CTD_human Ribonucleotide reductase subunit R1: a gene conferring sensitivity to valproic acid-induced neural tube defects in mice. 10716750 2000
Entrez Id: 6497
Gene Symbol: SKI
SKI
0.300 Biomarker disease CTD_human Mice lacking the ski proto-oncogene have defects in neurulation, craniofacial, patterning, and skeletal muscle development. 9284043 1997
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.300 Biomarker disease CTD_human Cranial effects of retinoic acid in the loop-tail (Lp) mutant mouse. 2373757 1990
Entrez Id: 6862
Gene Symbol: TBXT
TBXT
0.300 Biomarker disease CTD_human
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.300 Biomarker disease CTD_human
Entrez Id: 80199
Gene Symbol: FUZ
FUZ
0.300 Biomarker disease CTD_human
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 GeneticVariation disease BEFREE Recent studies of the Trp53 mouse mutant showed that exencephaly susceptibility depends on the presence of two X chromosomes, not the absence of the Y. 22753363 2012
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 GeneticVariation disease BEFREE In animal studies, deletion of p53 leads to a significant increase in embryos that exhibit exencephaly. 19229884 2009
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 Biomarker disease BEFREE We have previously shown that the p53 gene plays a crucial role in the development of malformations (exencephaly, gastroschisis, polydactyly, cleft palate and dwarfism) in control and irradiated mouse embryos. 15990362 2005
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 Biomarker disease BEFREE Lack of p53 function in the brain results in tumor formation in the astrocytic and lymphoid lineages and in severe neurodevelopmental diseases, such as exencephaly. 10321972 1999
Entrez Id: 280636
Gene Symbol: SELENOH
SELENOH
0.020 Biomarker disease BEFREE Exencephaly frequency is reduced in SELH/Bc by an alternative commercial ration. 19117321 2009
Entrez Id: 280636
Gene Symbol: SELENOH
SELENOH
0.020 GeneticVariation disease BEFREE Multifactorial genetic causes, as are present in the curly tail stock (15-20% spina bifida), or the SELH/Bc strain (15-20% exencephaly), lead to nonsyndromic NTDs. 10525207 1999
Entrez Id: 3664
Gene Symbol: IRF6
IRF6
0.010 AlteredExpression disease BEFREE Over-expression of Irf6 caused exencephaly, a rostral neural tube defect, through suppression of Tfap2a and Grhl3 expression. 30689861 2019
Entrez Id: 27315
Gene Symbol: PGAP2
PGAP2
0.010 GeneticVariation disease BEFREE We identified a novel mouse mutant (<i>cleft lip/palate, edema and exencephaly; Clpex)</i> with a hypo-morphic mutation in <i>Post-Glycophosphatidylinositol Attachment to Proteins-2 (Pgap2)</i>, a component of the GPI biosynthesis pathway. 31232685 2019
Entrez Id: 25831
Gene Symbol: HECTD1
HECTD1
0.010 GeneticVariation disease BEFREE Mice homozygous for Hectd1-mutant showed early embryonic lethality with abnormal placental development and defective of neural tube closure resulting in exencephaly. 31301385 2019