Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 317
Gene Symbol: APAF1
APAF1
0.010 AlteredExpression disease BEFREE Overloading HK-2 with Lysine levels reproducing those observed in urine of patients affected by LPI (10 mM) increased apoptosis (+30%; p < 0.01 vs.C), as well as Bax and Apaf-1 expressions (+30-50% p < 0.05), while downregulated Bcl-2 (-40% p < 0.05). 22403019 2012
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 Biomarker disease BEFREE Overloading HK-2 with Lysine levels reproducing those observed in urine of patients affected by LPI (10 mM) increased apoptosis (+30%; p < 0.01 vs.C), as well as Bax and Apaf-1 expressions (+30-50% p < 0.05), while downregulated Bcl-2 (-40% p < 0.05). 22403019 2012
Entrez Id: 6366
Gene Symbol: CCL21
CCL21
0.010 GeneticVariation disease BEFREE Interestingly, population-specific carrier frequencies of loss-of-function variants in SLC genes associated with recessive Mendelian disease recapitulated the ethnogeographic variation of the corresponding disorders, including cystinuria in Jewish individuals, type II citrullinemia in East Asians, and lysinuric protein intolerance in Finns, thus providing a powerful resource for clinical geneticists to inform about population-specific prevalence and allelic composition of Mendelian SLC diseases. 31679053 2019
Entrez Id: 5199
Gene Symbol: CFP
CFP
0.010 GeneticVariation disease BEFREE For this purpose, we utilized FACS technique to reveal fluorescence resonance energy transfer (FRET) in cells expressing wild type or LPI-mutant CFP-tagged y+LAT1 and YFP-tagged 4F2hc. 23940088 2013
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.020 GeneticVariation disease BEFREE The congenital form includes inborn errors of surfactant metabolism, lysinuric protein intolerance and mutations in the components of granulocyte-macrophage colony-stimulating factor receptor.The main symptoms are non-specific. 28512724 2017
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.020 Biomarker disease BEFREE Moreover, the expression of SLC7A7 is regulated by GM-CSF in monocytes, pointing to a role of y+LAT1 in the pathogenesis of LPI associated PAP. 21110863 2010
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.010 Biomarker disease BEFREE LPI macrophages secreted significantly less nitric oxide than control macrophages, whereas plasma concentrations of inflammatory chemokines CXCL8, CXCL9 and CXCL10 were elevated in the LPI patients. 26210182 2015
Entrez Id: 28514
Gene Symbol: DLL1
DLL1
0.010 Biomarker disease BEFREE Characterization of the lysinuric protein intolerance (LPI) region within T-cell receptor alpha/delta gene cluster on chromosome site 14q11. 10364825 1999
Entrez Id: 27040
Gene Symbol: LAT
LAT
0.030 GeneticVariation disease BEFREE Lysinuric protein intolerance (LPI) is a rare autosomal disease caused by defective cationic amino acid (CAA) transport due to mutations in <i>SLC7A7</i>, which encodes for the y<sup>+</sup>LAT1 transporter. 31653080 2019
Entrez Id: 27040
Gene Symbol: LAT
LAT
0.030 GeneticVariation disease BEFREE Lysinuric protein intolerance (LPI) is a rare metabolic disease resulting from recessive-inherited mutations in the SLC7A7 gene encoding the cationic amino-acids transporter subunit y<sup>+</sup>LAT1. 28057010 2017
Entrez Id: 27040
Gene Symbol: LAT
LAT
0.030 Biomarker disease BEFREE Lysinuric protein intolerance (LPI) is caused by dysfunction of the dibasic amino acid membrane transport owing to the functional abnormality of y<sup>+</sup>L amino acid transporter-1 (y<sup>+</sup> LAT-1). 31213652 2019
Entrez Id: 4625
Gene Symbol: MYH7
MYH7
0.020 GeneticVariation disease BEFREE Linkage analysis in Finnish LPI families recently assigned the LPI gene locus to a 10 cM interval between markers D14S72 and MYH7 on the long arm of chromosome 14. 9887380 1999
Entrez Id: 4625
Gene Symbol: MYH7
MYH7
0.020 Biomarker disease BEFREE For the haplotype analysis 11 DNA markers from the LPI critical region were used (D14S742, D14S50, D14S283, five TCRA intragenic polymorphic sites, D14S990, MYH7 and D14S80). 10451527 1999
Entrez Id: 162417
Gene Symbol: NAGS
NAGS
0.010 Biomarker disease BEFREE Deficiencies of arginase, N-acetylglutamate synthase, carbamoyl phosphate synthetase, citrin, and lysinuric protein intolerance were also observed. 30285816 2018
Entrez Id: 4942
Gene Symbol: OAT
OAT
0.010 Biomarker disease BEFREE We measured L-ornithine oxidation in cultured skin fibroblasts from seven patients with hyperornithinaemia-hyperammonaemia-homocitrullinuria (HHH) syndrome (McKusick 23897), and compared it with oxidation by ornithine aminotransferase deficient gyrate atrophy (McKusick 25887) cells and lysinuric protein intolerance (McKusick 22270) cells in which there is an ornithine transport abnormality at the plasma membrane. 2501580 1989
Entrez Id: 5694
Gene Symbol: PSMB6
PSMB6
0.010 Biomarker disease BEFREE Characterization of the lysinuric protein intolerance (LPI) region within T-cell receptor alpha/delta gene cluster on chromosome site 14q11. 10364825 1999
Entrez Id: 6520
Gene Symbol: SLC3A2
SLC3A2
0.060 Biomarker disease BEFREE Identification and characterization of a membrane protein (y+L amino acid transporter-1) that associates with 4F2hc to encode the amino acid transport activity y+L. A candidate gene for lysinuric protein intolerance. 9829974 1998
Entrez Id: 6520
Gene Symbol: SLC3A2
SLC3A2
0.060 Biomarker disease BEFREE Lysinuric protein intolerance (LPI) is a rare autosomal inherited disease caused by defective cationic aminoacid transport 4F2hc/y(+)LAT-1 at the basolateral membrane of epithelial cells in the intestine and kidney. 18716612 2009
Entrez Id: 6520
Gene Symbol: SLC3A2
SLC3A2
0.060 GeneticVariation disease BEFREE Mutations in system b(0,+) (rBAT-b(0,+)AT) and in system y(+)L (4F2hc-y(+)LAT1) cause the primary inherited aminoacidurias (PIAs) cystinuria and lysinuric protein intolerance, respectively. 15772300 2005
Entrez Id: 6520
Gene Symbol: SLC3A2
SLC3A2
0.060 GeneticVariation disease BEFREE Immunostaining experiments revealed that frameshift mutants 1291delCTTT, 1548delC and LPI(Fin)remained intracellular on expression with 4F2hc. 10655553 2000
Entrez Id: 6520
Gene Symbol: SLC3A2
SLC3A2
0.060 Biomarker disease BEFREE We believe that these conformational changes because of mutation could be the reason for decreased interaction with 4F2 cell-surface antigen heavy chain causing LPI. 31211457 2019
Entrez Id: 6520
Gene Symbol: SLC3A2
SLC3A2
0.060 Biomarker disease BEFREE The heteromerization of y+LAT1 and 4F2hc within the cell is not disrupted by any of the tested LPI mutations. 23940088 2013
Entrez Id: 6542
Gene Symbol: SLC7A2
SLC7A2
0.010 Biomarker disease BEFREE Human cationic amino acid transporter gene hCAT-2 is assigned to 8p22 but is not the causative gene in lysinuric protein intolerance. 9225973 1997
Entrez Id: 8140
Gene Symbol: SLC7A5
SLC7A5
0.030 GeneticVariation disease BEFREE Lysinuric protein intolerance (LPI) is a rare autosomal disease caused by defective cationic amino acid (CAA) transport due to mutations in <i>SLC7A7</i>, which encodes for the y<sup>+</sup>LAT1 transporter. 31653080 2019
Entrez Id: 8140
Gene Symbol: SLC7A5
SLC7A5
0.030 Biomarker disease BEFREE Lysinuric protein intolerance (LPI) is caused by dysfunction of the dibasic amino acid membrane transport owing to the functional abnormality of y<sup>+</sup>L amino acid transporter-1 (y<sup>+</sup> LAT-1). 31213652 2019