Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6366
Gene Symbol: CCL21
CCL21
0.010 GeneticVariation disease BEFREE Interestingly, population-specific carrier frequencies of loss-of-function variants in SLC genes associated with recessive Mendelian disease recapitulated the ethnogeographic variation of the corresponding disorders, including cystinuria in Jewish individuals, type II citrullinemia in East Asians, and lysinuric protein intolerance in Finns, thus providing a powerful resource for clinical geneticists to inform about population-specific prevalence and allelic composition of Mendelian SLC diseases. 31679053 2019
Entrez Id: 162417
Gene Symbol: NAGS
NAGS
0.010 Biomarker disease BEFREE Deficiencies of arginase, N-acetylglutamate synthase, carbamoyl phosphate synthetase, citrin, and lysinuric protein intolerance were also observed. 30285816 2018
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.010 Biomarker disease BEFREE In addition, secretion of TNF-α, IL-12 and IL-1RA by TLR2/1 stimulation and IL-12 and IL-1RA by TLR4 stimulation was increased in the LPI patients. 26210182 2015
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.010 Biomarker disease BEFREE LPI macrophages secreted significantly less nitric oxide than control macrophages, whereas plasma concentrations of inflammatory chemokines CXCL8, CXCL9 and CXCL10 were elevated in the LPI patients. 26210182 2015
Entrez Id: 5199
Gene Symbol: CFP
CFP
0.010 GeneticVariation disease BEFREE For this purpose, we utilized FACS technique to reveal fluorescence resonance energy transfer (FRET) in cells expressing wild type or LPI-mutant CFP-tagged y+LAT1 and YFP-tagged 4F2hc. 23940088 2013
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 Biomarker disease BEFREE Overloading HK-2 with Lysine levels reproducing those observed in urine of patients affected by LPI (10 mM) increased apoptosis (+30%; p < 0.01 vs.C), as well as Bax and Apaf-1 expressions (+30-50% p < 0.05), while downregulated Bcl-2 (-40% p < 0.05). 22403019 2012
Entrez Id: 317
Gene Symbol: APAF1
APAF1
0.010 AlteredExpression disease BEFREE Overloading HK-2 with Lysine levels reproducing those observed in urine of patients affected by LPI (10 mM) increased apoptosis (+30%; p < 0.01 vs.C), as well as Bax and Apaf-1 expressions (+30-50% p < 0.05), while downregulated Bcl-2 (-40% p < 0.05). 22403019 2012
Entrez Id: 11136
Gene Symbol: SLC7A9
SLC7A9
0.010 Biomarker disease BEFREE Recently, the role of b(o,+)AT (SLC7A9) in cystinuria (non Type I) and the role of y(+)LAT-1 (SLC7A7) in lysinuric protein intolerance have been demonstrated. 11377971 2001
Entrez Id: 5694
Gene Symbol: PSMB6
PSMB6
0.010 Biomarker disease BEFREE Characterization of the lysinuric protein intolerance (LPI) region within T-cell receptor alpha/delta gene cluster on chromosome site 14q11. 10364825 1999
Entrez Id: 7528
Gene Symbol: YY1
YY1
0.010 Biomarker disease BEFREE Characterization of the lysinuric protein intolerance (LPI) region within T-cell receptor alpha/delta gene cluster on chromosome site 14q11. 10364825 1999
Entrez Id: 28514
Gene Symbol: DLL1
DLL1
0.010 Biomarker disease BEFREE Characterization of the lysinuric protein intolerance (LPI) region within T-cell receptor alpha/delta gene cluster on chromosome site 14q11. 10364825 1999
Entrez Id: 23428
Gene Symbol: SLC7A8
SLC7A8
0.010 AlteredExpression disease BEFREE Mutational analysis excluded any direct involvement of the SLC7A8 gene product in LPI disease. 10610726 1999
Entrez Id: 6542
Gene Symbol: SLC7A2
SLC7A2
0.010 Biomarker disease BEFREE Human cationic amino acid transporter gene hCAT-2 is assigned to 8p22 but is not the causative gene in lysinuric protein intolerance. 9225973 1997
Entrez Id: 4942
Gene Symbol: OAT
OAT
0.010 Biomarker disease BEFREE We measured L-ornithine oxidation in cultured skin fibroblasts from seven patients with hyperornithinaemia-hyperammonaemia-homocitrullinuria (HHH) syndrome (McKusick 23897), and compared it with oxidation by ornithine aminotransferase deficient gyrate atrophy (McKusick 25887) cells and lysinuric protein intolerance (McKusick 22270) cells in which there is an ornithine transport abnormality at the plasma membrane. 2501580 1989
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.020 GeneticVariation disease BEFREE The congenital form includes inborn errors of surfactant metabolism, lysinuric protein intolerance and mutations in the components of granulocyte-macrophage colony-stimulating factor receptor.The main symptoms are non-specific. 28512724 2017
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.020 Biomarker disease BEFREE Moreover, the expression of SLC7A7 is regulated by GM-CSF in monocytes, pointing to a role of y+LAT1 in the pathogenesis of LPI associated PAP. 21110863 2010
Entrez Id: 4625
Gene Symbol: MYH7
MYH7
0.020 GeneticVariation disease BEFREE Linkage analysis in Finnish LPI families recently assigned the LPI gene locus to a 10 cM interval between markers D14S72 and MYH7 on the long arm of chromosome 14. 9887380 1999
Entrez Id: 4625
Gene Symbol: MYH7
MYH7
0.020 Biomarker disease BEFREE For the haplotype analysis 11 DNA markers from the LPI critical region were used (D14S742, D14S50, D14S283, five TCRA intragenic polymorphic sites, D14S990, MYH7 and D14S80). 10451527 1999
Entrez Id: 8140
Gene Symbol: SLC7A5
SLC7A5
0.030 GeneticVariation disease BEFREE Lysinuric protein intolerance (LPI) is a rare autosomal disease caused by defective cationic amino acid (CAA) transport due to mutations in <i>SLC7A7</i>, which encodes for the y<sup>+</sup>LAT1 transporter. 31653080 2019
Entrez Id: 27040
Gene Symbol: LAT
LAT
0.030 GeneticVariation disease BEFREE Lysinuric protein intolerance (LPI) is a rare autosomal disease caused by defective cationic amino acid (CAA) transport due to mutations in <i>SLC7A7</i>, which encodes for the y<sup>+</sup>LAT1 transporter. 31653080 2019
Entrez Id: 8140
Gene Symbol: SLC7A5
SLC7A5
0.030 Biomarker disease BEFREE Lysinuric protein intolerance (LPI) is caused by dysfunction of the dibasic amino acid membrane transport owing to the functional abnormality of y<sup>+</sup>L amino acid transporter-1 (y<sup>+</sup> LAT-1). 31213652 2019
Entrez Id: 27040
Gene Symbol: LAT
LAT
0.030 Biomarker disease BEFREE Lysinuric protein intolerance (LPI) is caused by dysfunction of the dibasic amino acid membrane transport owing to the functional abnormality of y<sup>+</sup>L amino acid transporter-1 (y<sup>+</sup> LAT-1). 31213652 2019
Entrez Id: 27040
Gene Symbol: LAT
LAT
0.030 GeneticVariation disease BEFREE Lysinuric protein intolerance (LPI) is a rare metabolic disease resulting from recessive-inherited mutations in the SLC7A7 gene encoding the cationic amino-acids transporter subunit y<sup>+</sup>LAT1. 28057010 2017
Entrez Id: 8140
Gene Symbol: SLC7A5
SLC7A5
0.030 GeneticVariation disease BEFREE Lysinuric protein intolerance (LPI) is a rare metabolic disease resulting from recessive-inherited mutations in the SLC7A7 gene encoding the cationic amino-acids transporter subunit y<sup>+</sup>LAT1. 28057010 2017
Entrez Id: 9057
Gene Symbol: SLC7A6
SLC7A6
0.040 Biomarker disease BEFREE y+LAT1 and y+LAT2 contribution to arginine uptake in different human cell models: Implications in the pathophysiology of Lysinuric Protein Intolerance. 31705628 2020