Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 57468
Gene Symbol: SLC12A5
SLC12A5
0.010 PosttranslationalModification disease BEFREE In the present study, we determined significantly lower NKCC1 DNA methylation and significantly higher KCC2 DNA methylation levels in patients with JME compared with the healthy controls. 30759289 2019
Entrez Id: 23569
Gene Symbol: PADI4
PADI4
0.010 Biomarker disease BEFREE PME had a higher brain-PAD than JME (22.0 vs. 9.3 years). 31160692 2019
Entrez Id: 6558
Gene Symbol: SLC12A2
SLC12A2
0.010 Biomarker disease BEFREE The aim of this study was to investigate the potential role of NKCC1 (SCL12A2) and KCC2 (SCL12A5) in JME by comparing their DNA methylation status in patients with JME versus healthy controls. 30759289 2019
Entrez Id: 79665
Gene Symbol: DHX40
DHX40
0.010 Biomarker disease BEFREE PME had a higher brain-PAD than JME (22.0 vs. 9.3 years). 31160692 2019
Entrez Id: 846
Gene Symbol: CASR
CASR
0.010 GeneticVariation disease BEFREE To date, only six genes harboring pathogenic variants <i>(GABRA1, GABRD, EFHC1, BRD2, CASR, and ICK)</i> with Mendelian and complex inheritance and covering a limited proportion of the world population, are considered as major susceptibility alleles for JME. 31611775 2019
Entrez Id: 607
Gene Symbol: BCL9
BCL9
0.010 GeneticVariation disease BEFREE The GABRD 659 G > A polymorphism may play an important role in the susceptibility of JME and LGS and this polymorphism may also increase the duration of postictal period in JME patients but may decrease the duration of seizure in LGS patients. 29785705 2018
Entrez Id: 610
Gene Symbol: HCN2
HCN2
0.010 GeneticVariation disease BEFREE Our study suggests that HCN2 rs3752158 is involved in the susceptibility to JME. 29047147 2018
Entrez Id: 8940
Gene Symbol: TOP3B
TOP3B
0.010 Biomarker disease BEFREE TOP3B: A Novel Candidate Gene in Juvenile Myoclonic Epilepsy? 29490292 2018
Entrez Id: 51557
Gene Symbol: LGSN
LGSN
0.010 GeneticVariation disease BEFREE The GABRD 659 G > A polymorphism may play an important role in the susceptibility of JME and LGS and this polymorphism may also increase the duration of postictal period in JME patients but may decrease the duration of seizure in LGS patients. 29785705 2018
Entrez Id: 1786
Gene Symbol: DNMT1
DNMT1
0.010 AlteredExpression disease BEFREE We also measured global methylation levels and DNA methyl transferase 1 (DNMT1) transcript expression in JME families by standard methods. 29608786 2018
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.010 GeneticVariation disease BEFREE The GABRD 659 G > A polymorphism may play an important role in the susceptibility of JME and LGS and this polymorphism may also increase the duration of postictal period in JME patients but may decrease the duration of seizure in LGS patients. 29785705 2018
Entrez Id: 151393
Gene Symbol: RMDN2
RMDN2
0.010 GeneticVariation disease BEFREE NHGRI gene-level evidence and variant-level evidence establish EFHC1 as the first non-ion channel microtubule-associated protein whose mutations disturb R-type VDCC and TRPM2 calcium currents in overgrown synapses and dendrites within abnormally migrated dislocated neurons, thus explaining CTC convulsions and "microdysgenesis" neuropathology of JME.Genet Med 19 2, 144-156. 27467453 2017
Entrez Id: 55638
Gene Symbol: SYBU
SYBU
0.010 GeneticVariation disease BEFREE NHGRI gene-level evidence and variant-level evidence establish EFHC1 as the first non-ion channel microtubule-associated protein whose mutations disturb R-type VDCC and TRPM2 calcium currents in overgrown synapses and dendrites within abnormally migrated dislocated neurons, thus explaining CTC convulsions and "microdysgenesis" neuropathology of JME.Genet Med 19 2, 144-156. 27467453 2017
Entrez Id: 219541
Gene Symbol: MED19
MED19
0.010 Biomarker disease BEFREE NHGRI gene-level evidence and variant-level evidence establish EFHC1 as the first non-ion channel microtubule-associated protein whose mutations disturb R-type VDCC and TRPM2 calcium currents in overgrown synapses and dendrites within abnormally migrated dislocated neurons, thus explaining CTC convulsions and "microdysgenesis" neuropathology of JME.Genet Med 19 2, 144-156. 27467453 2017
Entrez Id: 28954
Gene Symbol: REM1
REM1
0.010 Biomarker disease BEFREE REM sleep is significantly decreased in JME patients. 28704743 2017
Entrez Id: 55177
Gene Symbol: RMDN3
RMDN3
0.010 GeneticVariation disease BEFREE NHGRI gene-level evidence and variant-level evidence establish EFHC1 as the first non-ion channel microtubule-associated protein whose mutations disturb R-type VDCC and TRPM2 calcium currents in overgrown synapses and dendrites within abnormally migrated dislocated neurons, thus explaining CTC convulsions and "microdysgenesis" neuropathology of JME.Genet Med 19 2, 144-156. 27467453 2017
Entrez Id: 51115
Gene Symbol: RMDN1
RMDN1
0.010 GeneticVariation disease BEFREE NHGRI gene-level evidence and variant-level evidence establish EFHC1 as the first non-ion channel microtubule-associated protein whose mutations disturb R-type VDCC and TRPM2 calcium currents in overgrown synapses and dendrites within abnormally migrated dislocated neurons, thus explaining CTC convulsions and "microdysgenesis" neuropathology of JME.Genet Med 19 2, 144-156. 27467453 2017
Entrez Id: 110806307
Gene Symbol: STIN2-VNTR
STIN2-VNTR
0.010 AlteredExpression disease BEFREE In our study we detected an association between the presence of 5-HTTVNTR with less transcriptional efficient genotypes and JME, which suggests that modulation of the serotoninergic system might be indicated in epileptogenesis in JME. 25481722 2015
Entrez Id: 57094
Gene Symbol: CPA6
CPA6
0.010 GeneticVariation disease BEFREE In the present study, we screened for CPA6 mutations in patients with juvenile myoclonic epilepsy and identified two novel missense mutations: Arg36His and Asn271Ser. 25875328 2015
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.010 GeneticVariation disease BEFREE The less efficient transcriptional genotypes for 5-HTT polymorphisms were more frequent in JME patients (OR 9.33, CI 2.85-30.60; p value < 0.001). 25481722 2015
Entrez Id: 2147
Gene Symbol: F2
F2
0.010 GeneticVariation disease BEFREE Lack of association between the prothrombin rs1799963 polymorphism and juvenile myoclonic epilepsy. 25992517 2015
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.010 Biomarker disease BEFREE These results seem to exclude the DRPLA gene as a major candidate gene for JME in this European population. 25398822 2015
Entrez Id: 8863
Gene Symbol: PER3
PER3
0.010 GeneticVariation disease BEFREE Accordingly, we investigated whether functional clock gene polymorphisms (PER2 111C>G, CLOCK 3111T>C, and PER3 VNTR) might influence the risk for JME. 24892753 2014
Entrez Id: 8864
Gene Symbol: PER2
PER2
0.010 GeneticVariation disease BEFREE Accordingly, we investigated whether functional clock gene polymorphisms (PER2 111C>G, CLOCK 3111T>C, and PER3 VNTR) might influence the risk for JME. 24892753 2014
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.010 GeneticVariation disease BEFREE In the present study we inquired the role of multidrug transporters ABCB1 and ABCG2 variants in determining AED-resistance and susceptibility to epilepsy in three well-characterized cohorts comprising of mesial temporal lobe epilepsy with hippocampal sclerosis (MTLE-HS) (prototype for AED-resistant epilepsy); juvenile myoclonic epilepsy (JME) (prototype for AED-responsive epilepsy); and healthy non-epileptic controls, in 738 subjects of Malayalam speaking south Indian ancestry. 24586633 2014