Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.100 AlteredExpression disease BEFREE Interestingly, whereas bcl2 over-expression appears to be restricted to the spindle cell tumoral component, c-kit mainly involves the epithelial component of biphasic SS. 11487273 2001
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.050 Biomarker disease BEFREE BCOR-CCNB3-positive soft tissue sarcoma with round-cell and spindle-cell histology: a series of four cases highlighting the pitfall of mimicking poorly differentiated synovial sarcoma. 27228320 2016
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.050 GeneticVariation disease BEFREE These tumors were subjected to methylation profiling and could be assigned to Ewing sarcoma in 14 (47%), to small blue round cell tumors with CIC alteration in 6 (20%), to small blue round cell tumors with BCOR alteration in 4 (13%), to synovial sarcoma and to malignant rhabdoid tumor in 2 cases each. 29572501 2018
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.050 Biomarker disease BEFREE BCOR-CCNB3 fusion sarcoma is cyclin B3-positive, usually occurs in bone or soft tissue of children, and may mimic a poorly differentiated synovial sarcoma. 30633925 2019
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.050 Biomarker disease BEFREE Furthermore, BCOR-rearranged tumors often displayed spindle cell areas, either well defined in intersecting fascicles or blending with the round cell component, which appears distinct from most other fusion-positive SBRCTs and shares histologic overlap with poorly differentiated synovial sarcoma. 26752546 2016
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.050 AlteredExpression disease BEFREE BCOR upregulation in a poorly differentiated synovial sarcoma with SS18L1-SSX1 fusion-A pathologic and molecular pitfall. 27914109 2017
Entrez Id: 638
Gene Symbol: BIK
BIK
0.010 PosttranslationalModification disease BEFREE Quisinostat inhibits aggresome formation in response to proteasome inhibition, and combination treatment leads to elevated endoplasmic reticulum stress, activation of pro-apoptotic effector proteins BIM and BIK, phosphorylation of BCL-2, increased levels of reactive oxygen species, and suppression of tumor growth in a murine model of synovial sarcoma. 28056055 2017
Entrez Id: 65980
Gene Symbol: BRD9
BRD9
0.010 Biomarker disease BEFREE We demonstrate that BRD9 supports oncogenic mechanisms underlying the SS18-SSX fusion in synovial sarcoma and highlight targeted degradation of BRD9 as a potential therapeutic opportunity in this disease. 30431433 2018
Entrez Id: 85417
Gene Symbol: CCNB3
CCNB3
0.010 Biomarker disease BEFREE BCOR-CCNB3-positive soft tissue sarcoma with round-cell and spindle-cell histology: a series of four cases highlighting the pitfall of mimicking poorly differentiated synovial sarcoma. 27228320 2016
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.040 AlteredExpression disease BEFREE To determine whether nuclear beta-catenin is associated with cyclin D1 overexpression in SS and whether primary and metastatic SS differ in the expression of these markers. 16740029 2006
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.040 AlteredExpression disease BEFREE Nuclear beta-catenin correlates with cyclin D1 expression in spindle and pleomorphic sarcomas but not in synovial sarcoma. 16733209 2006
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.040 AlteredExpression disease BEFREE SYT-SSX-dependent expression of cyclin D1 may be an important mechanism in the development and progression of synovial sarcoma and also raises the possibility for targeted therapy. 12097301 2002
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.040 AlteredExpression disease BEFREE Molecular and immunohistochemical analyses of BCL2, KI-67, and cyclin D1 expression in synovial sarcoma. 19602458 2009
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.020 AlteredExpression disease BEFREE UPS were found to have higher levels of PD-L1 (P≤.001) and PD-1 (P≤.05) on immunohistochemistry and had the highest T-cell infiltration based on T-cell receptor sequencing, significantly more than SS, which had the lowest (P≤.05). 28463396 2017
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.020 Biomarker disease BEFREE Our results provide a preclinical rationale for screening of patients with synovial sarcoma for the colocalization of CD8, PD-1, and PD-L1, which may be a marker for response to PD-1 blockade therapy. 28039162 2017
Entrez Id: 947
Gene Symbol: CD34
CD34
0.040 Biomarker disease BEFREE Eligibility criteria included: biopsy or surgical resection; suspicion of: dermatofibrosarcoma protuberans (cohort 1), dedifferentiated liposarcoma (cohort 2), Ewing's sarcoma family of tumours (cohort 3), synovial sarcoma (cohort 4), alveolar rhabdomyosarcoma (cohort 5), and myxoid or round cell liposarcoma (cohort 6); review by one sarcoma-expert pathologist; availability of frozen material (except for cohort 1 of patients with dermatofibrosarcoma protuberans because anti-CD34 immunohistochemistry is performed on paraffin-embedded tissue); and patient information. 26970672 2016
Entrez Id: 947
Gene Symbol: CD34
CD34
0.040 Biomarker disease BEFREE Although molecular confirmation is the diagnostic gold standard for synovial sarcoma, TLE1, in view of its high sensitivity may be a useful marker within the optimal IHC panel comprising EMA, BCL2, MIC2, CD34 and CK7, especially on small biopsy samples, for substantiating a diagnosis of synovial sarcoma. 23287123 2012
Entrez Id: 947
Gene Symbol: CD34
CD34
0.040 Biomarker disease BEFREE Immunostaining for TLE1, BCL2, CD99, epithelial membrane antigen, cytokeratin (AE1/AE3), cytokeratin 7, S-100 protein, and CD34 was consistent with typical SS. 28761985 2017
Entrez Id: 947
Gene Symbol: CD34
CD34
0.040 GeneticVariation disease BEFREE In conclusion, in keeping with literature data, our results show that reactivity for epithelial membrane antigen, cytokeratin AE1/AE3, and E-cadherin, in combination with CD34 negativity, are the most useful and sensitive markers for diagnosing monophasic fibrous and poorly differentiated t(X;18)-positive SS. 12409719 2002
Entrez Id: 952
Gene Symbol: CD38
CD38
0.100 GeneticVariation disease BEFREE This case illustrates the importance of proper procurement of frozen tissue for molecular genetic analysis for the identification of the t(X;18), characteristic of synovial sarcoma. 11845884 2002
Entrez Id: 952
Gene Symbol: CD38
CD38
0.100 Biomarker disease BEFREE Submandibular synovial sarcoma with t(X;18) and synovial sarcoma of the toe with additional cytogenetic abnormalities: presentation of two cases and review of the literature. 12034530 2002
Entrez Id: 952
Gene Symbol: CD38
CD38
0.100 GeneticVariation disease BEFREE Translocations t(X;7) and t(7;14) in a synovial sarcoma. 1648957 1991
Entrez Id: 952
Gene Symbol: CD38
CD38
0.100 Biomarker disease BEFREE Karyotype on fresh tissue represents a genome-wide screen of gross chromosomal alterations, whereas fluorescence in situ hybridization and polymerase chain reaction detect specific defects that are characteristic of a given tumor type such as t(11;22) EWSR1-FLI1 in Ewing family tumors, t(X;18) SS18-SSX1 in synovial sarcoma, t(2;13) PAX3-FOXO1A in alveolar rhabdomyosarcoma, and MYCN gene amplification in neuroblastoma. 19214114 2009
Entrez Id: 952
Gene Symbol: CD38
CD38
0.100 GeneticVariation disease BEFREE In summary, translocation t(X;18) is a chromosomal aberration specific for synovial sarcoma. 8579122 1996
Entrez Id: 952
Gene Symbol: CD38
CD38
0.100 GeneticVariation disease BEFREE Oncogenesis in synovial sarcoma is driven by the chromosomal translocation t(X,18; p11,q11), which generates an in-frame fusion of the SWI/SNF subunit SS18 to the C-terminal repression domains of SSX1 or SSX2. 25614489 2015