Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 Biomarker disease BEFREE Most children with medulloblastoma fall within the standard-risk clinical disease group defined by absence of high-risk features (metastatic disease, large-cell/anaplastic histology, and MYC amplification), which includes 50-60% of patients and has a 5-year event-free survival of 75-85%. 30392813 2018
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 Biomarker disease BEFREE Human MYC-amplified (Med8A and D283) and non-amplified (UW228-2 and ONS76) MB cell lines were incubated for 2, 4 or 6 h with increasing doses (0-100 μg/ml) of 5-ALA, and PPIX accumulation was determined by flow cytometry. 30445362 2018
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 AlteredExpression disease BEFREE The BET inhibitor JQ1 suppressed MYC expression in a human G3 MB cell line (HD-MB03) and CRISPR-Myc, but not in Retro-Myc MBs. 29880921 2018
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.400 AlteredExpression disease BEFREE Index 2 had diffuse PHOX2B expression, MYCN amplification and no copy number changes of medulloblastoma, in keeping with neuroblastoma. 29758594 2018
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 GeneticVariation disease BEFREE In addition, the combination treatment significantly prolonged survival as compared to single-agent therapy in orthotopically transplanted human Group 3 MB with MYC amplifications. 29511348 2018
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.400 Biomarker disease BEFREE Literature review identifies the poor prognosis of MYCN-amplified medulloblastomas as well as extraneural metastases; we review the current limitations and future directions of medulloblastoma treatment options. 29343221 2018
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 AlteredExpression disease BEFREE In cell lines, SHH MB, which are low-MYC expressing, demonstrated both constitutive and inducible expression of PD-L1 while those in Group 3/4 that expressed high levels of MYC had only inducible expression. 29721192 2018
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 Biomarker disease BEFREE Results also demonstrated that the MYC-amplified MB lines showed a higher sensitivity to combined therapies compared to non-MYC-amplified cell lines. 29682173 2018
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 PosttranslationalModification disease BEFREE Functional analysis of enriched pathways highlighted cell-cycle progression and protein synthesis as therapeutic targets for MYC-like medulloblastoma. 29562177 2018
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 Biomarker disease BEFREE Furthermore, combination therapy with S3-NTDi and cisplatin significantly decreased highly aggressive MYC-amplified MB cell growth and induced apoptosis by downregulating STAT3 regulated proliferation and anti-apoptotic gene expression. 29280516 2018
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.400 Biomarker disease BEFREE Furthermore, it also upregulated the expression of phosphorylated STAT3, indicating that the IL‑6/GP130/STAT3 pathway plays a central role in medulloblastoma. 29207075 2018
Entrez Id: 51684
Gene Symbol: SUFU
SUFU
0.400 GeneticVariation disease BEFREE Twenty-two patients from 17 families were identified with medulloblastoma and a germline SUFU mutation (median age at diagnosis: 16.5 mo). 29186568 2018
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.400 Biomarker disease BEFREE Immediate transcriptional changes from this combined MYC blockade were found using RNA-Seq profiling and showed remarkable similarities to changes in MYC target gene expression when MYCN was turned off with doxycycline in our MYCN-inducible animal model for Group 3 MB. 29511348 2018
Entrez Id: 5015
Gene Symbol: OTX2
OTX2
0.400 AlteredExpression disease BEFREE PRUNE1 is highly expressed in metastatic medulloblastoma group 3, which is characterized by TGF-β signalling activation, c-MYC amplification, and OTX2 expression. 29490009 2018
Entrez Id: 5015
Gene Symbol: OTX2
OTX2
0.400 Biomarker disease BEFREE Our study provides mechanistic insight into the networks controlled by OTX2 in MB stem/progenitor cells and reveals novel roles for axon guidance genes and their downstream effectors as putative tumor suppressors in MB. 29377567 2018
Entrez Id: 5294
Gene Symbol: PIK3CG
PIK3CG
0.400 Biomarker disease BEFREE The data from the present study suggest that TRIM59 induces epithelial-to-mesenchymal transition and promotes migration and invasion by PI3K/AKT signaling pathway in medulloblastoma. 29805559 2018
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.400 GeneticVariation disease BEFREE Rictor/mTORC2 loss delayed timely differentiation of granule cell precursors (GCPs) during cerebellar development, promoting sustained GCP proliferation and medulloblastoma formation, which recapitulated critical features of TP53 mutant sonic hedgehog (SHH) medulloblastomas with GLI2 and/or N-MYC amplification. 29996106 2018
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.400 Biomarker disease BEFREE Furthermore, combination therapy with S3-NTDi and cisplatin significantly decreased highly aggressive MYC-amplified MB cell growth and induced apoptosis by downregulating STAT3 regulated proliferation and anti-apoptotic gene expression. 29280516 2018
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 AlteredExpression disease BEFREE Transient β-catenin transfection led to an increase in the β-catenin gene and protein expression in MB cell lines. 30374857 2018
Entrez Id: 5294
Gene Symbol: PIK3CG
PIK3CG
0.400 Biomarker disease BEFREE Therefore, we investigated the anti-MB efficacies of combined HH inhibitor Vismodegib and PI3K-mTOR dual-inhibitor BEZ235 together or combined individually with cisplatin against high-risk MB. 29682173 2018
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.400 Biomarker disease BEFREE We firstly isolated CSCs from Sonic Hedgehog (SHH) MB derived from Ptch1 heterozygous mice and compared their expression level of EMT-related transcripts and microRNAs with cerebellar NSCs. 30483126 2018
Entrez Id: 51684
Gene Symbol: SUFU
SUFU
0.400 GeneticVariation disease BEFREE Gorlin syndrome is associated with germline mutations in components of the Sonic Hedgehog pathway, including Patched1 (<i>PTCH1)</i> and Suppressor of fused (<i>SUFU)</i><i>SUFU</i> mutation carriers appear to have an especially high risk of early-onset medulloblastoma. 28620006 2017
Entrez Id: 5015
Gene Symbol: OTX2
OTX2
0.400 AlteredExpression disease BEFREE Our studies thus show that OTX2 controls the regulatory landscape of Group 3 medulloblastoma through cooperative activity at enhancer elements and contributes to the expression of critical target genes.<b>Significance:</b> The gene regulation mechanisms that drive medulloblastoma are not well understood. 28213356 2017
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.400 GeneticVariation disease BEFREE Nevoid basal cell carcinoma syndrome (NBCCS), caused by a PTCH1 mutation in the hedgehog signaling pathway, occasionally exhibits macrocephaly and medulloblastoma. 28328116 2017
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.400 AlteredExpression disease BEFREE TEAD4's co-activator, YAP1, and the downstream targets, MYC and CCND1, were also found to be upregulated in AT/RT when compared to medulloblastoma. 27966820 2017