Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 238
Gene Symbol: ALK
ALK
0.010 GeneticVariation disease BEFREE Mutations in epidermal growth factor receptor (<i>EGFR</i>), and rearrangements of anaplastic lymphoma kinase (<i>ALK</i>) are targetable in lung cancer, while <i>BRAF</i> mutations have been successfully targeted in metastatic melanoma. 30886831 2019
Entrez Id: 2803
Gene Symbol: GOLGA4
GOLGA4
0.010 GeneticVariation disease BEFREE We describe here a metastatic melanoma with a GOLGA4-RAF1 fusion and pathogenic variants in CTNNB1 and CDKN2A. 30835257 2019
Entrez Id: 216
Gene Symbol: ALDH1A1
ALDH1A1
0.010 AlteredExpression disease BEFREE We found that ALDH1A1 and ALDH1A3 had both higher and broader expression ranges in melanoma patients, and that ALDH1A3 expression correlated with better overall survival in metastatic melanoma. 31580832 2019
Entrez Id: 5315
Gene Symbol: PKM
PKM
0.010 AlteredExpression disease BEFREE Overexpression of HSP60, GAPDH and PKM2 was detected in melanoma human samples compared with naevi, showing a gradient of increased expression from radial growth phase to metastatic melanoma. 30537064 2019
Entrez Id: 80781
Gene Symbol: COL18A1
COL18A1
0.010 Biomarker disease BEFREE Endostatin and Gal3BP may represent prognostic biomarkers for patients on ipilimumab treatment in metastatic melanoma and should be further evaluated. 30821848 2019
Entrez Id: 220
Gene Symbol: ALDH1A3
ALDH1A3
0.010 AlteredExpression disease BEFREE Our study provides evidence that high ALDH1A3 mRNA expression is not only a prognostic marker but also a predictive marker for BRAF/MEK inhibitor treatment response in BRAF-mutant metastatic melanoma patients. 31580832 2019
Entrez Id: 3329
Gene Symbol: HSPD1
HSPD1
0.010 AlteredExpression disease BEFREE Overexpression of HSP60, GAPDH and PKM2 was detected in melanoma human samples compared with naevi, showing a gradient of increased expression from radial growth phase to metastatic melanoma. 30537064 2019
Entrez Id: 4599
Gene Symbol: MX1
MX1
0.010 GeneticVariation disease BEFREE To better understand the biological traits associated with ulceration that could explain the efficacy of prophylactic type 1 IFN, we performed immunohistochemical analysis of various molecules (major histocompatibility complex class I and class II, MX Dynamin Like GTPase 1 (MX1), inducible Nitric-Oxide Synthase (iNOS) or CD47) in two retrospective cohorts of melanoma patients, one diagnosed with a primary cutaneous melanoma (1995-2013, N = 172, among whom 49% were ulcerated melanoma (UM)) and a second one diagnosed with metastatic melanoma amenable to lymph node resection (EORTC 18952 and 18991 trials, N = 98, among whom 44% were UM). 31646109 2019
Entrez Id: 6515
Gene Symbol: SLC2A3
SLC2A3
0.010 AlteredExpression disease BEFREE Increased GLUT3 expression was more frequent in melanoma than in nevi (P < 0.0001), and in metastatic melanoma than in primary melanomas (P < 0.001). 31135601 2019
Entrez Id: 645682
Gene Symbol: POU5F1P4
POU5F1P4
0.010 AlteredExpression disease BEFREE 3, 3-diaminobenzidine (DAB) immunohistochemical (IHC) staining of ten samples of MM to the brain demonstrated the expression of the embryonic stem cell (ESC) markers OCT4, NANOG, SALL4, SOX2 and pSTAT3. 30626524 2019
Entrez Id: 961
Gene Symbol: CD47
CD47
0.010 Biomarker disease BEFREE To better understand the biological traits associated with ulceration that could explain the efficacy of prophylactic type 1 IFN, we performed immunohistochemical analysis of various molecules (major histocompatibility complex class I and class II, MX Dynamin Like GTPase 1 (MX1), inducible Nitric-Oxide Synthase (iNOS) or CD47) in two retrospective cohorts of melanoma patients, one diagnosed with a primary cutaneous melanoma (1995-2013, N = 172, among whom 49% were ulcerated melanoma (UM)) and a second one diagnosed with metastatic melanoma amenable to lymph node resection (EORTC 18952 and 18991 trials, N = 98, among whom 44% were UM). 31646109 2019
Entrez Id: 5317
Gene Symbol: PKP1
PKP1
0.010 AlteredExpression disease BEFREE Furthermore, an ROC curve showed that PKP1 expression had good power in the diagnostics of both primary melanoma (p =  5.30e-06, AUC = 0.8) and metastatic melanoma (p =  1.13e-10, AUC = 0.925). 30841437 2019
Entrez Id: 642559
Gene Symbol: POU5F1P3
POU5F1P3
0.010 AlteredExpression disease BEFREE 3, 3-diaminobenzidine (DAB) immunohistochemical (IHC) staining of ten samples of MM to the brain demonstrated the expression of the embryonic stem cell (ESC) markers OCT4, NANOG, SALL4, SOX2 and pSTAT3. 30626524 2019
Entrez Id: 171023
Gene Symbol: ASXL1
ASXL1
0.010 AlteredExpression disease BEFREE The expression levels of PRKCA, BUB1, BAP1 and ASXL1 were significantly different between primary melanoma and metastatic melanoma. 31173190 2019
Entrez Id: 100507612
Gene Symbol: LINC00402
LINC00402
0.010 Biomarker disease BEFREE Survival analysis identified seven differentially expressed mRNAs, five differentially expressed miRNAs (miRNA-29c, miRNA-100, miR-142-3p, miR-150, miR-516a-2), and six differentially expressed lncRNAs (AC068594.1, C7orf71, FAM41C, GPC5-AS1, MUC19, LINC00402) that were correlated with survival time in patients with metastatic melanoma. 31004080 2019
Entrez Id: 8317
Gene Symbol: CDC7
CDC7
0.010 Biomarker disease BEFREE Further studies are warranted to investigate the clinical effect of targeting CDC7 in metastatic melanoma. 31578454 2019
Entrez Id: 331
Gene Symbol: XIAP
XIAP
0.010 Biomarker disease BEFREE An overlapping peptide library covering the full length of the XIAP protein was used to screen T cell responses of peripheral blood mononuclear cells (PBMC) from stage-IV melanoma patients treated with or without anti-CTLA4 (ipilimumab). 31317218 2019
Entrez Id: 259307
Gene Symbol: IL4I1
IL4I1
0.010 Biomarker disease BEFREE Genetic IL4I1 invalidation increases the number of tumor-associated B cells and delays development of spontaneous metastatic melanoma in mice that are transgenic for the RET oncogene, without impairing tumor-specific antibody response. 31679193 2019
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.010 Biomarker disease BEFREE Oxalomalate suppresses metastatic melanoma through IDH-targeted stress response to ROS. 31020875 2019
Entrez Id: 57556
Gene Symbol: SEMA6A
SEMA6A
0.010 Biomarker disease BEFREE The focus of this study was to develop a PS multicomponent nanoparticle drug conjugate carrier system which specifically targets MM cells via biomarkers to actively enhance PS delivery and so improve MM PDT. 31692760 2019
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.010 AlteredExpression disease BEFREE 3, 3-diaminobenzidine (DAB) immunohistochemical (IHC) staining of ten samples of MM to the brain demonstrated the expression of the embryonic stem cell (ESC) markers OCT4, NANOG, SALL4, SOX2 and pSTAT3. 30626524 2019
Entrez Id: 11169
Gene Symbol: WDHD1
WDHD1
0.010 Biomarker disease BEFREE Included patients were aged ≥18 years, and had ≥1 MM diagnosis and ≥1 claim for systemic therapy from 2004 to 2015. 30192155 2018
Entrez Id: 27351
Gene Symbol: DESI1
DESI1
0.010 Biomarker disease BEFREE We therefore carried out this study to compare the 1-year, 2-year, and median overall survival (OS) among metastatic melanoma patients in pretargeted and post-targeted eras. 29023264 2018
Entrez Id: 1435
Gene Symbol: CSF1
CSF1
0.010 AlteredExpression disease BEFREE We show that CSF1 is expressed in human melanoma, and patients with metastatic melanoma have increased CSF1 in blood compared to healthy subjects. 29643229 2018
Entrez Id: 51164
Gene Symbol: DCTN4
DCTN4
0.010 AlteredExpression disease BEFREE As compared with normal human skin, p62 was up-regulated in human nevus, malignant melanoma and metastatic melanoma. 28715145 2018