Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7066
Gene Symbol: THPO
THPO
0.010 Biomarker disease BEFREE We utilized mass cytometry to interrogate localization and intensity of thrombopoietin-mediated intracellular signaling in sAML. 30426661 2019
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.010 Biomarker disease BEFREE Targeting nuclear β-catenin as therapy for post-myeloproliferative neoplasm secondary AML. 30575820 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.010 GeneticVariation disease BEFREE This study aimed to elucidate patterns of disease transformation to secondary myelofibrosis (SMF) or secondary acute myeloid leukemia (SAML) and the development of second primary malignancies in South Korean patients with BCR-ABL1-negative myeloproliferative neoplasms (MPNs). 31765478 2019
Entrez Id: 10018
Gene Symbol: BCL2L11
BCL2L11
0.010 AlteredExpression disease BEFREE Durable remissions with venetoclax monotherapy in secondary AML refractory to hypomethylating agents and high expression of BCL-2 and/or BIM. 30725494 2019
Entrez Id: 83595
Gene Symbol: SOX7
SOX7
0.010 PosttranslationalModification disease BEFREE Importantly, SOX7 methylation was significantly increased during progression from MDS to secondary acute myeloid leukemia (sAML). 30554866 2019
Entrez Id: 3720
Gene Symbol: JARID2
JARID2
0.010 GeneticVariation disease BEFREE Genetic deletion of Jarid2 either reduced overall survival of animals with MPNs or drove transformation to sAML, depending on the timing and context of co-operating mutations. 30423295 2018
Entrez Id: 9700
Gene Symbol: ESPL1
ESPL1
0.010 Biomarker disease BEFREE In conclusion, the appearance of cells with unusual high separase activity levels, as indicated by increased SAD values, concurs with the transformation of MDS to sAML and may reflect separase dysregulation potentially contributing to clonal evolution during MDS progression. 29370237 2018
Entrez Id: 26040
Gene Symbol: SETBP1
SETBP1
0.010 Biomarker disease BEFREE SETBP1 is a major oncogene in myeloid neoplasms, which cooperates with various genetic events and causes distinct phenotypes of MDS/MPN and sAML. 28447248 2017
Entrez Id: 92737
Gene Symbol: DNER
DNER
0.010 Biomarker disease BEFREE BET protein bromodomain inhibitor-based combinations are highly active against post-myeloproliferative neoplasm secondary AML cells. 27677740 2017
Entrez Id: 2878
Gene Symbol: GPX3
GPX3
0.010 PosttranslationalModification disease BEFREE GPX3 methylation density was significantly increased during the progression from MDS to secondary acute myeloid leukemia (sAML) in three follow-up paired patients. 27891827 2017
Entrez Id: 811
Gene Symbol: CALR
CALR
0.010 GeneticVariation disease BEFREE Peripheral blood sample was donated by a 61years old female patient diagnosed with acute myeloid leukemia secondary to a primary myelofibrosis harboring the 52-bp deletion in the CALR gene (c.1092_1143del, p.L367fs*46) and the R693X mutation in the ASXL1 gene (c.2077C>T, p.R693X). 29034885 2017
Entrez Id: 83886
Gene Symbol: PRSS27
PRSS27
0.010 Biomarker disease BEFREE In the present studies, we demonstrate that treatment with BET (bromodomain and extraterminal) protein inhibitor (BETi), for example, JQ1, inhibits growth and induces apoptosis of cultured and primary, patient-derived (PD), post-MPN sAML blast progenitor cells. 27677740 2017
Entrez Id: 6646
Gene Symbol: SOAT1
SOAT1
0.010 Biomarker disease BEFREE MF and sAML malignant cells demonstrated a high prevalence of hyperactivation of the JAK-STAT, MAP kinase, PI3 kinase and NFκB signaling pathways. 28008177 2017
Entrez Id: 6343
Gene Symbol: SCT
SCT
0.010 Biomarker disease BEFREE To address outcomes after allo-SCT in patients with abn(17p), we retrospectively analysed de novo or secondary AML undergoing SCT between 2000 and 2013 from the EBMT registry. 28100265 2017
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
0.010 Biomarker disease BEFREE Enriched in secondary acute myeloid leukemia (sAML; in comparison to high-risk MDS), FLT3, PTPN11, WT1, IDH1, NPM1, IDH2 and NRAS mutations (type 1) tended to be newly acquired, and were associated with faster sAML progression and a shorter overall survival time. 27992414 2017
Entrez Id: 442920
Gene Symbol: MIR196B
MIR196B
0.010 AlteredExpression disease BEFREE We demonstrated that miR-196b-5p was up-regulated in intermediate II and higher groups, and in secondary AML (s-AML) patients in particular (P < 0.01) compared with healthy controls, suggesting that the higher expression levels are associated with increased risk of the development of MDS. 28224273 2017
Entrez Id: 54505
Gene Symbol: DHX29
DHX29
0.010 Biomarker disease BEFREE Overall, mutations in FLT3, DNMT3A, NPM1 and IDH2 were more specific for pAML whereas UTAF1, STAG2, BCORL1, BCOR, EZH2, JAK2, CBL, PRPF8, SF3B1, ASXL1 and DHX29 were more specific for sAML. 27983727 2016
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.010 Biomarker disease BEFREE However, in multivariate analysis that included clinical variables, only FLT3 and DNMT3A remained specific for pAML and EZH2, BCOR, SF3B1 and ASXL1 for sAML. 27983727 2016
Entrez Id: 9138
Gene Symbol: ARHGEF1
ARHGEF1
0.010 GeneticVariation disease BEFREE While acquisition of clonal DNA mutations has been linked to increased rates of secondary AML for individuals older than 60 years, the contribution of RNA processing alterations to human hematopoietic stem and progenitor aging and LSC generation remains unclear. 27570067 2016
Entrez Id: 1028
Gene Symbol: CDKN1C
CDKN1C
0.010 AlteredExpression disease BEFREE Expression of CDKN1C in the bone marrow of patients with myelodysplastic syndrome and secondary acute myeloid leukemia is associated with poor survival after conventional chemotherapy. 27170453 2016
Entrez Id: 10371
Gene Symbol: SEMA3A
SEMA3A
0.010 AlteredExpression disease BEFREE Furthermore, we have identified three biomodules that are co-expressed with SEMA3A and up-regulated in t-AML, one of which consists of previously characterized EZH2-repressed gene targets. 26043758 2015
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.010 Biomarker disease BEFREE To characterize the subset of EZH2 target genes that might contribute to t-AML pathogenesis, we developed a novel computational analysis to integrate tissue-specific histone modifications and genome-wide transcriptional regulation. 26043758 2015
Entrez Id: 5979
Gene Symbol: RET
RET
0.010 GeneticVariation disease BEFREE We report the molecular cloning and functional characterization of a novel FGFR1OP (exon 11)-RET (exon 11) gene fusion event (named FGFR1OP-RET), mediated by a reciprocal translocation t(6; 10)(q27; q11), in a patient affected by primary myelofibrosis (PMF) with secondary acute myeloid leukemia (AML). 24315414 2014
Entrez Id: 11116
Gene Symbol: FGFR1OP
FGFR1OP
0.010 GeneticVariation disease BEFREE We report the molecular cloning and functional characterization of a novel FGFR1OP (exon 11)-RET (exon 11) gene fusion event (named FGFR1OP-RET), mediated by a reciprocal translocation t(6; 10)(q27; q11), in a patient affected by primary myelofibrosis (PMF) with secondary acute myeloid leukemia (AML). 24315414 2014
Entrez Id: 1523
Gene Symbol: CUX1
CUX1
0.010 GeneticVariation disease BEFREE Patients with sAML carrying TP53 mutations demonstrated lower 1-year OS rate than those with wild-type TP53 (14.3% ± 9.4% vs. 35.4% ± 7.2%; P = 0.002), while complex karyotype, del7q (CUX1) and del7p (IKZF1) showed no significant effect on OS. 22887079 2012