Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 29
Gene Symbol: ABR
ABR
0.010 Biomarker disease BEFREE Telomeric chromosome arm 17p markers 144-D6 and ABR were lost in 6 (75%) of 8 informative tumors classified as high-grade (7 AAs, 1 GM) and in 2 (10%) of 20 informative JPAs. 7536455 1995
Entrez Id: 90
Gene Symbol: ACVR1
ACVR1
0.300 Biomarker disease CTD_human Recurrent somatic mutations in ACVR1 in pediatric midline high-grade astrocytoma. 24705250 2014
Entrez Id: 367
Gene Symbol: AR
AR
0.300 Biomarker disease CTD_human Expression of estrogen receptors, androgen receptor and steroid receptor coactivator-3 is negatively correlated to the differentiation of astrocytic tumors. 24680642 2014
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 Biomarker disease BEFREE In fact, the highest percentage of bcl-2 immunoreactive cells was noted in low-grade gliomas, that is, in juvenile pilocytic astrocytomas and oligoastrocytomas. 7490615 1995
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.310 Biomarker disease CTD_human Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma. 23817572 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.310 GeneticVariation disease BEFREE AZD6244 was evaluated against two JPA xenografts, BT-35 (wild-type BRAF) and BT-40 (mutant [V600E] BRAF). 20806365 2010
Entrez Id: 80381
Gene Symbol: CD276
CD276
0.010 AlteredExpression disease BEFREE B7-H3 mRNA expression was also significantly higher in DIPG samples than in normal brain and juvenile pilocytic astrocytoma (WHO grade I) specimens. 23232807 2013
Entrez Id: 960
Gene Symbol: CD44
CD44
0.010 Biomarker disease BEFREE We studied 75 astrocytic tumors with different degrees of anaplasia including juvenile pilocytic astrocytoma (JPA), low-grade astrocytoma (LGA), anaplastic astrocytoma (AA), and glioblastoma multiforme (GBM) to determine whether standard CD44 (CD44s) can be used as a clinically useful marker distinguishing between low- and high-grade gliomas. 9436970 1997
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.010 Biomarker disease BEFREE To explore the possibility for a novel therapeutic approach we measured the effect of the epidermal growth factor receptor (EGFR) small molecule tyrosine kinase inhibitor gefitinib on five JPA primary cell-cultures. 16206208 2006
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.300 Biomarker disease CTD_human Expression of estrogen receptors, androgen receptor and steroid receptor coactivator-3 is negatively correlated to the differentiation of astrocytic tumors. 24680642 2014
Entrez Id: 2100
Gene Symbol: ESR2
ESR2
0.300 Biomarker disease CTD_human Expression of estrogen receptors, androgen receptor and steroid receptor coactivator-3 is negatively correlated to the differentiation of astrocytic tumors. 24680642 2014
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.300 Biomarker disease CTD_human Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma. 23817572 2013
Entrez Id: 23462
Gene Symbol: HEY1
HEY1
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 23493
Gene Symbol: HEY2
HEY2
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 3082
Gene Symbol: HGF
HGF
0.300 Biomarker disease CTD_human Agonists of the retinoic acid- and retinoid X-receptors inhibit hepatocyte growth factor secretion and expression in U87 human astrocytoma cells. 11223164 2001
Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
0.300 Biomarker disease CTD_human Hypoxia upregulates the expression of the NDRG1 gene leading to its overexpression in various human cancers. 15341671 2004
Entrez Id: 100124700
Gene Symbol: HOTAIR
HOTAIR
0.010 AlteredExpression disease BEFREE In this study, transcriptome analysis using the nanoString platform was performed, and expression of the HOX and HOTAIR genes was studied in pediatric tumors: 20 ATRTs, 10 ependymomas, 10 medulloblastomas, six glioblastoma multiforme, and nine juvenile pilocytic astrocytomas (JPAs). 25085602 2014
Entrez Id: 3234
Gene Symbol: HOXD8
HOXD8
0.010 GeneticVariation disease BEFREE Results indicate that in ATRTs, medulloblastomas, and JPAs, the HOTAIR and HOXC genes are highly expressed; however, HOXD8-10 genes are not silenced. 25085602 2014
Entrez Id: 3791
Gene Symbol: KDR
KDR
0.010 Biomarker disease BEFREE We assessed expression of KIT, phosphorylated KIT, stem cell factor (SCF) and vascular endothelial growth factor receptor-2 (VEGFR-2) in 35 juvenile pilocytic astrocytomas and 49 other pediatric brain tumors using immunohistochemistry, and KIT messenger RNA (mRNA) using in situ hybridization. 20030644 2010
Entrez Id: 57670
Gene Symbol: KIAA1549
KIAA1549
0.300 Biomarker disease CTD_human Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma. 23817572 2013
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.010 AlteredExpression disease BEFREE We assessed expression of KIT, phosphorylated KIT, stem cell factor (SCF) and vascular endothelial growth factor receptor-2 (VEGFR-2) in 35 juvenile pilocytic astrocytomas and 49 other pediatric brain tumors using immunohistochemistry, and KIT messenger RNA (mRNA) using in situ hybridization. 20030644 2010
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.300 Biomarker disease CTD_human Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma. 23817572 2013
Entrez Id: 9113
Gene Symbol: LATS1
LATS1
0.300 Biomarker disease CTD_human Promoter hypermethylation-mediated down-regulation of LATS1 and LATS2 in human astrocytoma. 17049657 2006
Entrez Id: 26524
Gene Symbol: LATS2
LATS2
0.300 Biomarker disease CTD_human Promoter hypermethylation-mediated down-regulation of LATS1 and LATS2 in human astrocytoma. 17049657 2006