Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 GeneticVariation phenotype BEFREE HPV 16 was found the most common HR-HPV type in ASC-US and LSIL whereas HPV 18 was the most common in HSIL. 30880699 2019
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Cytological examination revealed 12% of participants had atypical squamous cells of undetermined significance (ASC-US), 8% had low-grade squamous intraepithelial lesions (LSIL), 7% had high-grade squamous intraepithelial lesions (HSIL), and 14% had squamous cell carcinoma (SCC), while 59% of women had a normal cytology. 30261268 2018
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 GeneticVariation phenotype BEFREE Ten of the 15 cases were identified as atypical squamous cells - cannot exclude an HSIL (ASC-H) with secondary diagnosis of low-grade squamous intraepithelial lesion (LSIL), while five cases were identified as high-grade squamous intraepithelial lesion (HSIL), and a subsequent biopsy was recommended. 29154448 2018
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Both AHPV and Cobas were equally sensitive in detecting high-grade SIL in both scenarios of screening and ASC-US or AGC triage but AHPV showed a higher specificity. 30368218 2018
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Cytological abnormalities were classified as atypical squamous cells of undetermined significance (ASC-US), low-grade(LSIL) or high high-grade squamous intraepithelial lesion (HSIL). 29088236 2017
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE The per 1 log<sub>10</sub> -unit increase in viral load of a group of species 9 non-HPV16 oncogenic types was statistically significantly associated with risk of CIN2/3 for women with a cytologic diagnosis of within normal limits, ASC-US, or LSIL at the first HPV-positive visit but not for those with high-grade SIL. 28052328 2017
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE There was no difference in the ability of LSIL-H and ASC-H to predict CIN 2+. 27245707 2017
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE A substantial subset of patients with ASC-H interpretations is associated with an appreciable risk of clinically significant cervical disease. p16/Ki67 dual stain can provide additional valuable information that may lead to higher-quality management of women with ASC-H, especially when initial colposcopy or biopsy results do not show HSIL lesions. 28244884 2017
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Although patients found to have atypical squamous cells of undetermined significance (ASC-US) and low-grade squamous intraepithelial lesions (LSILs) on Papanicolaou (Pap) testing are treated conservatively, 5.2% to 18.8% of them progress to high-grade squamous intraepithelial lesions (HSILs). 26335500 2016
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE The HPV-positive rates for ASC-US and ASC-H were similar in 2012 and 2006. 25436905 2015
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 GeneticVariation phenotype BEFREE The distribution of Pap smear results was normal (4.7%), atypical squamous cells of uncertain significance (ASCUS) (42.1%), low-grade squamous intraepithelial lesion (26.8%), ASC-H (7.0%), and high-grade squamous intraepithelial lesion (HSIL) (19.5%). 24825374 2014
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Two women with ASC-US who were HPV DNA negative by the HC-II and positive by the TS-MPG or/and LA assays had lesions that progressed to low-grade squamous intraepithelial and high-grade squamous intraepithelial lesions. 23035194 2012
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Thirty six of them (37.9%) showed abnormal anal cytology as follows: atypical squamous cells of undetermined significance (ASC-US) in 19 (20.0%), atypical squamous cells but cannot exclude HSIL (ASC-H) in 1 (1.1%), low-grade squamous intraepithelial lesion (LSIL) in 15 (15.8%), and high-grade squamous intraepithelial lesion (HSIL) in 1 (1.1%). 22558293 2012
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 GeneticVariation phenotype BEFREE Patients with LSIL-H and HSIL had similar infection rates for low-risk/intermediate-risk HPV genotypes, which were lower than those in LSIL or LSIL and ASC-H combined. 22648956 2012
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Our results indicate that HPV triage testing is a reasonable and cost-effective approach for women with ASC-US vaginal Pap results and also a useful option for women with ASC-H vaginal Pap results. 22338056 2012
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Forty-five patients underwent conization for known lesions ranging from atypical squamous cells of undetermined significance (ASC-US) with high-risk HPV (hr-HPV) to high-grade squamous intraepithelial lesion (H-SIL/CIN2+) or adenocarcinoma. 19689463 2010
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Liquid-based cytology cases interpreted as high-grade squamous intraepithelial lesion (HSIL); low-grade squamous intraepithelial lesion (LSIL); atypical squamous cells, cannot exclude high-grade squamous intraepithelial lesion (ASC-H); and atypical squamous cells of undetermined significance (ASC-US) at Magee-Womens Hospital (Pittsburgh, Pennsylvania) were retrospectively identified for a 36-month period between July 1, 2005, and June 30, 2008, from women 50 years and older who also had hrHPV DNA test results. 20670132 2010
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE Positive rate of high-risk HPV DNA in groups of atypical squamous cells of undetermined significance (ASC-US), atypical squamous cells, cannot exclude high-grade (ASC-H), low-grade squamous intraepithelial lesions and high-grade squamous intraepithelial lesions was 53.7, 53.2, 84.6 and 93.0%, respectively. 17355305 2007
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE The positive predictive value (PPV) of ASC-H for high-grade squamous intraepithelial lesions overall was 32% while PPV of ASC-H with associated HR HPV was 42%. 17173297 2007
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE HPV-positive rates were determined in cases of low-grade squamous intraepithelial lesion (LSIL) and high-grade squamous intraepithelial lesion (HSIL), and follow-up rates of cervical intraepithelial neoplasia (CIN) were determined in HPV-positive and -negative cases of atypical squamous cells of unknown significance (ASC-US). 17091508 2006
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE The specificity for HC2 was 8.3% for HSIL, 16.9% for LSIL, and 48.7% for ASC-US; whereas the specificity for p16(INK4a) was 25% in HSIL, 59.1% in LSIL, and 68.4% in ASC-US. 17078096 2006
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 GeneticVariation phenotype BEFREE Of the remaining 139 (52.3%) cases, 86 (62%) had follow-up Pap Tests, of which 57 (66.3%) were negative, 15 (17.4%) were ASC-US, 12 (15%) were low-grade squamous intraepithelial lesions, and 2 (2.3%) were high-grade squamous intraepithelial lesions; 53 (38.1%) were lost to follow-up. 17041955 2006
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE One hundred seven cases, including 23 negative cases, 34 with low-grade squamous intraepithelial lesion (LSIL), 16 with high-grade squamous intraepithelial lesion (HSIL), 29 with atypical squamous cells of uncertain significance (ASC-US), and 5 cases with ASC suspicious for HSIL (ASC-H), were evaluated for both p16 expression and HPV DNA. 15584047 2005
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 GeneticVariation phenotype BEFREE Furthermore, HPV was detected in 56% of ASC-US and 71% of ASC-H cases. 15086283 2004
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.100 Biomarker phenotype BEFREE The cumulative incidence for a Pap test interpreted as atypical squamous cells or more severe (>or= ASC) was 16.8% (95% confidence interval [CI] = 15.0-18.6%), 6.4% (95% CI = 5.2-7.6%) for low-grade squamous intraepithelial lesions or more severe, and 2.2% (95% CI = 1.5-2.9%) for high-grade squamous intraepithelial lesions or more severe. 12412168 2002