Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 140733
Gene Symbol: MACROD2
MACROD2
0.010 Biomarker disease BEFREE Importantly, targetable gene fusions (PDGFRA-MACROD2 and NCOR1-MAP2K1) were detected in UPS. 31467233 2020
Entrez Id: 9611
Gene Symbol: NCOR1
NCOR1
0.010 Biomarker disease BEFREE Importantly, targetable gene fusions (PDGFRA-MACROD2 and NCOR1-MAP2K1) were detected in UPS. 31467233 2020
Entrez Id: 5604
Gene Symbol: MAP2K1
MAP2K1
0.010 Biomarker disease BEFREE Importantly, targetable gene fusions (PDGFRA-MACROD2 and NCOR1-MAP2K1) were detected in UPS. 31467233 2020
Entrez Id: 4923
Gene Symbol: NTSR1
NTSR1
0.010 Biomarker disease BEFREE Knockdown of NTSR1 prevented UPS cell proliferation and invasion. 31478563 2019
Entrez Id: 271
Gene Symbol: AMPD2
AMPD2
0.010 Biomarker disease BEFREE Here, we combine transcriptome analyses, immunohistochemistry, and functional assays to show that high adenosine monophosphate deaminase 2 (AMPD2) is a robust prognostic biomarker for worse outcome in undifferentiated pleomorphic sarcoma (UPS). 30267407 2019
Entrez Id: 53347
Gene Symbol: UBASH3A
UBASH3A
0.010 GeneticVariation disease BEFREE Notably, the splicing events of certain STS key genes were significantly associated with STS 2-year overall survival in the present study, including exon skip (ES) events in MDM2 and EWSR1, alternate terminator events in CDKN2A and HMGA2 for dedifferentiated liposarcoma, ES in MDM2 and alternate promoter events in CDKN2A for leiomyosarcoma, and ES in EWSR1 for undifferentiated pleomorphic sarcoma. 31443718 2019
Entrez Id: 10370
Gene Symbol: CITED2
CITED2
0.010 Biomarker disease BEFREE A subset of UPS is characterized by a CITED2-PRDM10 or a MED12-PRDM10 gene fusion. 31313299 2019
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.010 Biomarker disease BEFREE Notably, the splicing events of certain STS key genes were significantly associated with STS 2-year overall survival in the present study, including exon skip (ES) events in MDM2 and EWSR1, alternate terminator events in CDKN2A and HMGA2 for dedifferentiated liposarcoma, ES in MDM2 and alternate promoter events in CDKN2A for leiomyosarcoma, and ES in EWSR1 for undifferentiated pleomorphic sarcoma. 31443718 2019
Entrez Id: 4102
Gene Symbol: MAGEA3
MAGEA3
0.010 AlteredExpression disease BEFREE We analyzed MAGE-A3 expression of sarcoma subtypes available in the Cancer Genome Atlas and Cancer Cell Line Encyclopedia and show that undifferentiated pleomorphic sarcoma/myxofibrosarcoma (UPS/MFS) expresses this potential target gene. 31096717 2019
Entrez Id: 8061
Gene Symbol: FOSL1
FOSL1
0.010 AlteredExpression disease BEFREE Our results show that LBH589 could be a promising chemotherapeutic agent in the treatment of UPS and downregulation of the FOSL1 gene could be the new molecular target of UPS treatment. 30303565 2019
Entrez Id: 200504
Gene Symbol: GKN2
GKN2
0.010 AlteredExpression disease BEFREE Induction of burn injury-induced muscle atrophy ubiquitin-proteasome system (UPS) signaling pathways in effected muscle tissues was determined by Western blot protein expression measurements of E3 ubiquitin-protein ligase TRIM-63 (TRIM63, also known as MuRF1) and F-box only protein 32 (FBXO32, also known as atrogin-1 or MAFbx). 29493231 2018
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.010 Biomarker disease BEFREE This study will help define the role of single agent anti-PD1 and combination anti-CTLA4 and anti-PD1 therapy in patients with surgically resectable dedifferentiated liposarcoma and undifferentiated pleomorphic sarcoma. 30249211 2018
Entrez Id: 9332
Gene Symbol: CD163
CD163
0.010 Biomarker disease BEFREE We detected CD163 in 62 undifferentiated pleomorphic sarcoma samples, in which a high percentage of CD163-positive macrophages was associated with decreased overall survival and higher histologic grade. 29610117 2018
Entrez Id: 4069
Gene Symbol: LYZ
LYZ
0.010 AlteredExpression disease BEFREE Immunohistochemistry revealed the HSs and MFHs to express lysozyme. 30360911 2018
Entrez Id: 642559
Gene Symbol: POU5F1P3
POU5F1P3
0.010 AlteredExpression disease BEFREE To visualize putative sCSC we engineered patient-derived sarcoma cultures (2 OS and 3 UPS) with a lentiviral sCSC-detector wherein the promoter of stem-gene Oct4 controls the expression of eGFP. 30393581 2018
Entrez Id: 84676
Gene Symbol: TRIM63
TRIM63
0.010 AlteredExpression disease BEFREE Induction of burn injury-induced muscle atrophy ubiquitin-proteasome system (UPS) signaling pathways in effected muscle tissues was determined by Western blot protein expression measurements of E3 ubiquitin-protein ligase TRIM-63 (TRIM63, also known as MuRF1) and F-box only protein 32 (FBXO32, also known as atrogin-1 or MAFbx). 29493231 2018
Entrez Id: 3145
Gene Symbol: HMBS
HMBS
0.010 GeneticVariation disease BEFREE In the present study, tumor resected from 4 patients with a biopsy-proven USTS (2 undifferentiated pleomorphic sarcoma [UPS], 1 undifferentiated sarcoma not otherwise specified [NOS] and 1 undifferentiated spindle cell sarcoma [USS]) were grown orthotopically in the biceps femoris muscle of mice to establish PDOX models. 29481803 2018
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.010 AlteredExpression disease BEFREE To visualize putative sCSC we engineered patient-derived sarcoma cultures (2 OS and 3 UPS) with a lentiviral sCSC-detector wherein the promoter of stem-gene Oct4 controls the expression of eGFP. 30393581 2018
Entrez Id: 114907
Gene Symbol: FBXO32
FBXO32
0.010 AlteredExpression disease BEFREE Induction of burn injury-induced muscle atrophy ubiquitin-proteasome system (UPS) signaling pathways in effected muscle tissues was determined by Western blot protein expression measurements of E3 ubiquitin-protein ligase TRIM-63 (TRIM63, also known as MuRF1) and F-box only protein 32 (FBXO32, also known as atrogin-1 or MAFbx). 29493231 2018
Entrez Id: 645682
Gene Symbol: POU5F1P4
POU5F1P4
0.010 AlteredExpression disease BEFREE To visualize putative sCSC we engineered patient-derived sarcoma cultures (2 OS and 3 UPS) with a lentiviral sCSC-detector wherein the promoter of stem-gene Oct4 controls the expression of eGFP. 30393581 2018
Entrez Id: 3052
Gene Symbol: HCCS
HCCS
0.010 Biomarker disease BEFREE Eight human STS cell lines were used: fibrosarcoma (HT1080), liposarcoma (SW872, T778, MLS-402), synovial sarcoma (SW982, SYO1, 1273), and malignant fibrous histiocytoma (U2197). 28045549 2018
Entrez Id: 55027
Gene Symbol: HEATR3
HEATR3
0.010 Biomarker disease BEFREE As indicated by BrdU and MTT, curcumin significantly decreased the cell proliferation of five cell lines (HT1080, SW872, SYO1, 1273, and U2197) and the viability of two cell lines (SW872 and SW982). 28045549 2018
Entrez Id: 256646
Gene Symbol: NUTM1
NUTM1
0.010 Biomarker disease BEFREE We provide in this manuscript a detailed and comprehensive overview of systemic therapy considerations for the following histologic tumor types of the larynx: verrucous carcinoma (VC), HPV-related SCC, basaloid SCC (BSCC), lymphoepithelial carcinoma (LEC), adenosquamous carcinoma (ASC), typical and atypical carcinoid, small cell neuroendocrine carcinoma (SCNC), large cell neuroendocrine carcinoma (LCNC), NUT midline carcinomas (NUTMC), melanoma, adenoid cystic carcinoma, rhabdomyosarcoma (RMS), malignant fibrous histiocytoma (MFH), lymphoma, mucoepidermoid carcinoma (MEC), acinic cell carcinoma, and spindle cell carcinoma (SpCC). 29909903 2018
Entrez Id: 4000
Gene Symbol: LMNA
LMNA
0.010 GeneticVariation disease BEFREE A primary undifferentiated pleomorphic sarcoma of the lumbosacral region harboring a LMNA-NTRK1 gene fusion with durable clinical response to crizotinib: a case report. 30134855 2018
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.010 GeneticVariation disease BEFREE Identification of IDH1 or IDH2 mutations supports the diagnosis of dedifferentiated chondrosarcoma rather than UPS of bone while also providing some insight into the pathogenesis of these 2 lesions. 28552826 2017