Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 55349
Gene Symbol: CHDH
CHDH
0.010 GeneticVariation disease BEFREE Thus, the common GATA4 variant S377G is likely to be relatively benign in terms of its participation in CHD and PFO/Stroke. 21673957 2011
Entrez Id: 100128998
Gene Symbol: C20orf181
C20orf181
0.010 Biomarker disease BEFREE Tissue Plasminogen Activator to Treat a Stroke after Foam Sclerotherapy in a Woman with a Patent Foramen Ovale. 29402614 2018
Entrez Id: 4879
Gene Symbol: NPPB
NPPB
0.010 Biomarker disease BEFREE Cutoff values of BNP, E/e', and left atrial appendage flow velocity capable of distinguishing CS without large PFO from noncardioembolic stroke were 65.0 pg/mL (sensitivity 55.3%; specificity 70.9%), 13.0 (45.5%; 68.0%), and 46.0 cm/s (37.1%; 87.5%), respectively. 31694016 2019
Entrez Id: 4488
Gene Symbol: MSX2
MSX2
0.010 GeneticVariation disease BEFREE Between January 2012 and August 2016, 151 patients (mean age 41 ± 11 years) who had suffered from a cryptogenic thromboembolic event underwent transcatheter PFO closure with the PFM Nit-Occlud PFO device. 29068141 2018
Entrez Id: 5973
Gene Symbol: RENBP
RENBP
0.010 GeneticVariation disease BEFREE Migraine, particularly with aura, is an independent risk factor for IS, and the patient's IS risk is probably affected by other individual risk factors (e.g., age, genetic predisposition to thrombosis, presence of patent foramen ovale or enhanced platelet aggregation) which seem to be over-represented in migraine patients. 18545887 2008
Entrez Id: 477
Gene Symbol: ATP1A2
ATP1A2
0.010 GeneticVariation disease BEFREE We describe the case of one patient with pure sporadic hemiplegic migraine (SHM) with a novel ATP1A2 gene variant and a large patent foramen ovale (PFO) with atrial septal aneurysm. 29867740 2018
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.010 GeneticVariation disease BEFREE However, a region on chromosome 4p16, adjacent to the MSX1 and STX18 genes, was associated (P = 9.5 × 10⁻⁷) with the risk of ostium secundum atrial septal defect (ASD) in the discovery cohort (N = 340 cases), and this association was replicated in a further 417 ASD cases and 2,520 controls (replication P = 5.0 × 10⁻⁵; odds ratio (OR) in replication cohort = 1.40, 95% confidence interval (CI) = 1.19-1.65; combined P = 2.6 × 10⁻¹⁰). 23708191 2013
Entrez Id: 7450
Gene Symbol: VWF
VWF
0.010 Biomarker disease BEFREE Purported mechanisms for migraine-associated stroke include involvement of the vasculature (including vasospasm, arterial dissection and small vessel arteriopathy), hypercoagulability (elevated von Willebrand Factor, platelet activation) and elevated risk of cardioembolism (patent foramen ovale, atrial septal aneurysm). 16097850 2005
Entrez Id: 345
Gene Symbol: APOC3
APOC3
0.010 GeneticVariation disease BEFREE Three different polymorphisms located in the prothrombin, F2 (20210G/A), and apolipoprotein-C3 (-641A/C and -455T/A) genes were significantly associated with ICVD and PFO. 22784820 2013
Entrez Id: 85474
Gene Symbol: LBX2
LBX2
0.010 Biomarker disease BEFREE We identified LBX2 for the first time as a pathogenic gene of ASDII. 29669692 2018
Entrez Id: 116449
Gene Symbol: CLNK
CLNK
0.010 GeneticVariation disease BEFREE The first randomized clinical trial of patent foramen ovale (PFO) closure for prevention of migraine, the MIST trial, showed negative results. 28283958 2017
Entrez Id: 2152
Gene Symbol: F3
F3
0.010 GeneticVariation disease BEFREE We identified a male Polish patient with a very rare minor homozygous GG genotype of the tissue factor (TF) +5466A>G polymorphism, who within two months experienced a transient ischemic attack (TIA) and ischemic stroke of unknown origin associated with the presence of patent foramen ovale below 40 years of age. 19203804 2011
Entrez Id: 92579
Gene Symbol: G6PC3
G6PC3
0.010 GeneticVariation disease BEFREE We demonstrate that secundum atrial septal defect, patent ductus arteriosus and valvular defects are the most frequent cardiac anomalies in SCN4. 20717171 2011
Entrez Id: 2626
Gene Symbol: GATA4
GATA4
0.410 GeneticVariation disease CLINVAR
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
0.110 CausalMutation disease CLINVAR A Screening Approach to Identify Clinically Actionable Variants Causing Congenital Heart Disease in Exome Data. 29555671 2018
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.100 CausalMutation disease CLINVAR A Screening Approach to Identify Clinically Actionable Variants Causing Congenital Heart Disease in Exome Data. 29555671 2018
Entrez Id: 23118
Gene Symbol: TAB2
TAB2
0.100 GeneticVariation disease CLINVAR
Entrez Id: 4624
Gene Symbol: MYH6
MYH6
0.600 Biomarker disease CTD_human Mutation in myosin heavy chain 6 causes atrial septal defect. 15735645 2005
Entrez Id: 10084
Gene Symbol: PQBP1
PQBP1
0.300 Biomarker disease CTD_human Golabi-Ito-Hall syndrome results from a missense mutation in the WW domain of the PQBP1 gene. 16740914 2006
Entrez Id: 4624
Gene Symbol: MYH6
MYH6
0.600 Biomarker disease HPO
Entrez Id: 1482
Gene Symbol: NKX2-5
NKX2-5
0.430 Biomarker disease HPO
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
0.400 Biomarker disease HPO
Entrez Id: 4763
Gene Symbol: NF1
NF1
0.100 Biomarker disease HPO
Entrez Id: 6135
Gene Symbol: RPL11
RPL11
0.100 Biomarker disease HPO
Entrez Id: 2657
Gene Symbol: GDF1
GDF1
0.100 Biomarker disease HPO