Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 57026
Gene Symbol: PDXP
PDXP
0.090 GeneticVariation disease BEFREE In women with abnormal smears (cervical intraepithelial neoplasia [CIN] I, II, and III and invasive cancer) HPV infection was detected in 35-40%; this rate seemed to be age-independent. the Peak incidence of CIN appeared several years after that of HPV infection. 2888940 1987
Entrez Id: 1154
Gene Symbol: CISH
CISH
0.010 Biomarker disease BEFREE None of the cervical intraepithelial neoplasia grade I (CIN I) contained HPV 16 while 50% of the CIN III lesions (carcinoma in situ, CIS) contained HPV 16. 3022464 1986
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 Biomarker disease BEFREE Either HPV infection or accumulation of p53 was found in 16.7% (5/30) of the cases of normal or metaplastic cervix, 29.4% (5/17) of CIN I, 45.0% (9/20) of CIN II, 86.5% (32/37) of CIN III and 87.0% (20/23) of ISCC cases. 7697216 1995
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.030 Biomarker disease BEFREE In the Bax or HPV-DNA positive groups, bcl-2 positive cases in CIN I/II were in the minority, whereas in CIN III they constituted the majority. 8635035 1995
Entrez Id: 3265
Gene Symbol: HRAS
HRAS
0.010 Biomarker disease BEFREE However, grade specific nuclear staining of p21ras was found in the cells of 10 lesions that were classified as CIN I by histology. 9762942 1998
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.010 Biomarker disease BEFREE Here, we demonstrate that high-grade dysplasia (CIN III, n = 9) completely lacks both MCP-1 expression and CD68+-macrophage infiltration, while MCP-1-specific signals were occasionally detectable in one out of 5 CIN-II and in one out of 3 CIN-I lesions. 10360812 1999
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.030 Biomarker disease BEFREE Archival cervical biopsy specimens (n = 107) of normal squamous epithelia (n = 18), pure HPV squamous epithelial lesions (n = 15), cervical intraepithelial neoplasia (CIN) I lesions (n = 17), CIN II lesions (n = 26), and CIN III lesions (n = 31) underwent bcl-2 immunohistochemical analysis with use of the streptavidin-biotin complex/horseradish peroxidase system and nonisotopic in situ hybridization for the detection of HPV DNA. 10392638 1999
Entrez Id: 57026
Gene Symbol: PDXP
PDXP
0.090 GeneticVariation disease BEFREE We tested 105 women with low-grade cervical intraepithelial neoplasia (CIN-1), 92 women with CIN-3/carcinoma in situ or invasive cancer (CIN-3/CA), and 94 normal subjects. 10440809 1999
Entrez Id: 57026
Gene Symbol: PDXP
PDXP
0.090 Biomarker disease BEFREE The overall HPV positive rate was 44.3% with 18.6% (16/86) for normal/inflamed cervices, 36.4% (32/88) for condyloma, 64.7% (33/51) for cervical intraepithelial neoplasia grade 1 (CIN 1), 37.9% (11/29) for CIN 2, 68.3 (41/60) for CIN 3, and 77.8% (14/18) for carcinoma. 10459162 1999
Entrez Id: 7320
Gene Symbol: UBE2B
UBE2B
0.010 AlteredExpression disease BEFREE The data indicate that E2 protein expression is highest in koilocytes in lower-grade CIN (I), but decreases with increasing grade, whereas the detection of HPV DNA is delayed until CIN I/II, rising to the highest levels in carcinoma cells. 10859389 2000
Entrez Id: 57534
Gene Symbol: MIB1
MIB1
0.010 Biomarker disease BEFREE Also, in the one case in whom progression from CIN I to invasive cervical carcinoma was observed, the smear contained many MiB-1-positive cells. 11391816 2001
Entrez Id: 4288
Gene Symbol: MKI67
MKI67
0.010 Biomarker disease BEFREE Also, in the one case in whom progression from CIN I to invasive cervical carcinoma was observed, the smear contained many MiB-1-positive cells. 11391816 2001
Entrez Id: 4350
Gene Symbol: MPG
MPG
0.010 Biomarker disease BEFREE Interestingly, MPG expression in CIN III and invasive carcinoma (IC) was much higher than normal and CIN I. Granular positivity of MPG was notable in the perinuclear regions of the cytoplasm in HPV-infected invasive cancer. 11724299 2001
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.010 Biomarker disease BEFREE Only a few isolated epithelial cells stained positively for MMP-1 and MMP-2 in normal cervical tissue and CIN 1 lesions. 11812078 2002
Entrez Id: 4313
Gene Symbol: MMP2
MMP2
0.010 Biomarker disease BEFREE Only a few isolated epithelial cells stained positively for MMP-1 and MMP-2 in normal cervical tissue and CIN 1 lesions. 11812078 2002
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
0.010 Biomarker disease BEFREE Immunohistochemical analysis of cervical tissue specimens showed a clear nuclear staining for GATA-3 in normal cervical squamous epithelium (n = 14) and all cervical intraepithelial neoplasia (CIN) I (n = 6) and CIN II lesions (n = 2). 12057898 2002
Entrez Id: 2272
Gene Symbol: FHIT
FHIT
0.010 AlteredExpression disease BEFREE A significant statistical relationship was found between Fhit protein expression and HPV 16 infection in combined CIN1, CIN3, and MICA cases (P = <0.001). 12144820 2002
Entrez Id: 5457
Gene Symbol: POU4F1
POU4F1
0.010 AlteredExpression disease BEFREE In those women referred with persisting borderline or mildly dyskaryotic smears, those who had histologically proven underlying CIN II/III, had statistically significant higher Brn-3a levels than those with a similar smear but histologically shown to have HPV, CIN I, or no cervical abnormality. 12911730 2004
Entrez Id: 23705
Gene Symbol: CADM1
CADM1
0.010 PosttranslationalModification disease BEFREE We detected TSLC1 promoter hypermethylation in seven (35%, 95% CI = 15% to 59%) of 20 high-grade CIN lesions (i.e., CIN II and III) and in 30 (58%, 95% CI = 43% to 71%) of 52 cervical squamous cell carcinomas compared with none (0%, 95% CI = 0% to 34%) of nine normal cervical epithelial biopsy samples and none (0%, 95% CI = 0% to 22%) of 12 CIN I lesions (P<.001 for cervical squamous cell cancer versus normal epithelial biopsy samples plus CIN I lesions). 14970278 2004
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.010 GeneticVariation disease BEFREE Regression of low-grade cervical intraepithelial neoplasia in patients with HLA-DRB1*13 genotype. 15458897 2004
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE None of 20 non-neoplastic cervices showed p16 INK4A and MGMT gene hypermethylation, whereas at least one of these genes was hypermethylated with 50.0% (5/10) of CIN I, 65.0% (13/20) of CIN II-III, 70.2% (33/47) of SCC and 85.0% (17/20) of adenocarcinoma. p16 INK4A protein was totally negative in non-neoplastic cervices, but positive with 90.0% of CIN I, 100% of CIN II-III and adenocarcinoma, and 78.7% of SCC. 15785933 2005
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.010 GeneticVariation disease BEFREE None of 20 non-neoplastic cervices showed p16 INK4A and MGMT gene hypermethylation, whereas at least one of these genes was hypermethylated with 50.0% (5/10) of CIN I, 65.0% (13/20) of CIN II-III, 70.2% (33/47) of SCC and 85.0% (17/20) of adenocarcinoma. p16 INK4A protein was totally negative in non-neoplastic cervices, but positive with 90.0% of CIN I, 100% of CIN II-III and adenocarcinoma, and 78.7% of SCC. 15785933 2005
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE Similarly, two CIN 1 lesions with comparable CIN 2/3 p16 staining showed no evidence of viral integration. 15832093 2005
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.060 Biomarker disease BEFREE Similarly, two CIN 1 lesions with comparable CIN 2/3 p16 staining showed no evidence of viral integration. 15832093 2005
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 AlteredExpression disease BEFREE We evaluated Human Papillomavirus (HPV) testing and typing and pRb2/p130, p107 and p53 expressions (antibody D07) of 48 patients showing low-grade cervical intraepithelial neoplasia (LCIN, 18 cases), high-grade CIN (HCIN, 13 cases) and SCC (17 cases). 16158962 2005