Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3570
Gene Symbol: IL6R
IL6R
0.010 Biomarker disease BEFREE Using a specific monoclonal antibody, we showed here that gp80 is a dimeric form of the transmembrane glycoprotein gp36 of HIV-2. 2296088 1990
Entrez Id: 867
Gene Symbol: CBL
CBL
0.010 Biomarker disease BEFREE CBL-22 was highly sensitive to neutralization by HIV-2 sera and was cross-neutralized by some HIV-1 sera. 1975844 1990
Entrez Id: 6285
Gene Symbol: S100B
S100B
0.020 GeneticVariation disease BEFREE Natural variation of the nef gene in human immunodeficiency virus type 2 infections in Portugal. 12692296 2003
Entrez Id: 947
Gene Symbol: CD34
CD34
0.020 Biomarker disease BEFREE Vector DNA could be detected in HIV-2 vector-transduced nondividing CD34(+) CD38(-) human hematopoietic progenitor cells but not in those cells transduced with murine vectors. 9658096 1998
Entrez Id: 947
Gene Symbol: CD34
CD34
0.020 Biomarker disease BEFREE Using a novel thymic stromal culture technique, we evaluated the ability of a hairpin ribozyme specific for simian immunodeficiency virus (SIV) and human immunodeficiency virus type 2 (HIV-2) to inhibit viral replication in T lymphocytes derived from transduced CD34+ progenitor cells. 9389699 1997
Entrez Id: 6285
Gene Symbol: S100B
S100B
0.020 AlteredExpression disease BEFREE Purification of an Escherichia coli-expressed Nef protein from the human immunodeficiency virus-type 2. 8142139 1993
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.030 Biomarker disease BEFREE We have previously shown the existence of primary human immunodeficiency virus type 2 isolates (MIC97 and MJC97) unable to use major coreceptors to entry into peripheral blood mononuclear cells, including CCR5 and CXCR4. 19200444 2009
Entrez Id: 10630
Gene Symbol: PDPN
PDPN
0.030 Biomarker disease BEFREE Use of a new dual-antigen enzyme-linked immunosorbent assay to detect and characterize the human antibody response to the human immunodeficiency virus type 2 envelope gp125 and gp36 glycoproteins. 16455923 2006
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.030 Biomarker disease BEFREE Use of CXCR4 was observed only for HIV-2 variants from viremic individuals. 15650194 2005
Entrez Id: 10630
Gene Symbol: PDPN
PDPN
0.030 Biomarker disease BEFREE This ELISA, using a specific immunodominant epitope (11 amino acids) from the transmembrane (gp36) portion of the HIV-2 envelope glycoprotein showed a high concordance with PCR findings. 11418351 2001
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.030 Biomarker disease BEFREE Small amino acid changes in the V3 loop of human immunodeficiency virus type 2 determines the coreceptor usage for CXCR4 and CCR5. 10544150 1999
Entrez Id: 10630
Gene Symbol: PDPN
PDPN
0.030 Biomarker disease BEFREE Using a specific monoclonal antibody, we showed here that gp80 is a dimeric form of the transmembrane glycoprotein gp36 of HIV-2. 2296088 1990
Entrez Id: 25939
Gene Symbol: SAMHD1
SAMHD1
0.040 Biomarker disease BEFREE Together, these findings indicate that HIV-2 and HIV-1 support similar levels of CD4 T cell depletion <i>in vitro</i> despite HIV-2 Vpx-mediated degradation of the SAMHD1 transcription factor. 31578293 2019
Entrez Id: 25939
Gene Symbol: SAMHD1
SAMHD1
0.040 Biomarker disease BEFREE Human immunodeficiency virus type 2 (HIV-2) and simian immunodeficiency virus (SIV) encode an accessory protein called viral protein X (Vpx) that promotes proteasomal degradation of SAMHD1, leading to a rapid increase in cellular dNTP concentrations. 31462561 2019
Entrez Id: 100775105
Gene Symbol: ERVK-18
ERVK-18
0.040 GeneticVariation disease BEFREE Phylogenetic analysis of the env gene showed that all the Cuban sequences clustered in group A of HIV-2. 24925342 2014
Entrez Id: 25939
Gene Symbol: SAMHD1
SAMHD1
0.040 Biomarker disease BEFREE SAMHD1 degradation was induced by treating target macrophages with vesicular stomatitis virus glycoprotein-pseudotyped human immunodeficiency virus type 2 (HIV-2) particles containing viral protein X. 24599229 2014
Entrez Id: 25939
Gene Symbol: SAMHD1
SAMHD1
0.040 AlteredExpression disease BEFREE SAMHD1 activity is blocked by the Vpx accessory function present in human immunodeficiency virus type 2 and SIVsm. 24161438 2013
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.040 Biomarker disease BEFREE We have previously shown the existence of primary human immunodeficiency virus type 2 isolates (MIC97 and MJC97) unable to use major coreceptors to entry into peripheral blood mononuclear cells, including CCR5 and CXCR4. 19200444 2009
Entrez Id: 100775105
Gene Symbol: ERVK-18
ERVK-18
0.040 Biomarker disease BEFREE In the present case study, we attempted to observe amino acid substitutions in Gag and Env proteins and related parameters possibly associated with an increase in HIV-2 load. 18622680 2008
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.040 Biomarker disease BEFREE Increased frequency of circulating CCR5+ CD4+ T cells in human immunodeficiency virus type 2 infection. 17035326 2006
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.040 GeneticVariation disease BEFREE Using GHOST indicator cells, we showed for the first time that the only coreceptors efficiently used by low-pathogenic HIV-2 variants are CCR5, GPR15 (BOB), and CXCR6 (BONZO). 15650194 2005
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.040 Biomarker disease BEFREE Small amino acid changes in the V3 loop of human immunodeficiency virus type 2 determines the coreceptor usage for CXCR4 and CCR5. 10544150 1999
Entrez Id: 64006
Gene Symbol: ERVK-6
ERVK-6
0.040 Biomarker disease BEFREE The CD4-independent tropism of human immunodeficiency virus type 2 involves several regions of the envelope protein and correlates with a reduced activation threshold for envelope-mediated fusion. 8995671 1997
Entrez Id: 64006
Gene Symbol: ERVK-6
ERVK-6
0.040 Biomarker disease BEFREE The envelope glycoprotein of human immunodeficiency virus type 2 enhances viral particle release: a Vpu-like factor? 8551620 1996
Entrez Id: 100775105
Gene Symbol: ERVK-18
ERVK-18
0.040 Biomarker disease BEFREE The V3 and V4 domains of human immunodeficiency virus type 2 (HIV-2) env genes from 14 rhesus macaques experimentally infected by HIV-2 SBL6669/H5 were sequenced. 8151803 1994