Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE In a validation cohort of only nephrolithiasis patients, the CYP24A1-associated locus correlates with serum calcium concentration and a number of nephrolithiasis episodes while the DGKD-associated locus correlates with urinary calcium excretion. 31729369 2019
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE The novel nonsense CYP24A1 mutation, p.R223*, was also found heterozygously in other family members with a medical history of nephrolithiasis. 31288237 2019
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE Loss-of-function mutations in cytochrome P450 family 24 subfamily A member 1 (CYP24A1) gene are associated with Idiopathic Infantile Hypercalcemia (IIH) and adult kidney stone disease. 29574006 2018
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE Genetic CYP24A1 testing and biochemical analyses were offered to other family members; the father was heterozygous for the same novel genotype and was also affected with recurrent nephrolithiasis. 27639704 2017
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE More recent evidence has identified loss of function mutations in CYP24A1 in association with hypercalcemia, hypercalciuria and nephrolithiasis in humans. 28093352 2017
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 Biomarker disease BEFREE Loss-of-function mutations in the CYP24A1 gene, which encodes the vitamin D-24 hydroxylase, have been recognized as a cause of elevated 1,25-dihydroxyvitamin D concentrations, hypercalcemia, hypercalciuria, nephrocalcinosis and nephrolithiasis in infants and adults. 27394135 2016
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE Patients have been described with loss-of-function CYP24A1 (cytochrome P450, family 24, subfamily A, polypeptide 1) mutations that cause a high ratio of 25-hydroxyvitamin D to 24,25-dihydroxyvitamin D [25(OH)D/24,25(OH)2D], increased serum 1,25-dihydroxyvitamin D, and resulting hypercalcemia, hypercalciuria and nephrolithiasis. 26585929 2016
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE We sought an alternative assay to characterize a CYP24A1 mutation in a young adult with bilateral nephrolithiasis and hypercalcemia associated with ingestion of excess vitamin D supplements and robust dairy intake for 5 years. 25375986 2015
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE Loss-of-function mutations of vitamin D-24 hydroxylase have recently been recognized as a cause of hypercalcaemia and nephrocalcinosis/nephrolithiasis in infants and adults. 24235083 2014
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE The results of this study show that 1,25(OH)2D-24-hydroxylase deficiency due to bi-allelic mutations in CYP24A1 causes elevated serum vitamin D, hypercalciuria, nephrocalcinosis, and renal stones. 23293122 2013
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 GeneticVariation disease BEFREE CYP24A1 mutations should be considered in the differential diagnosis of hypercalciuric nephrolithiasis, especially as many adults are now prescribed supplemental oral vitamin D. 23470222 2013
Entrez Id: 1591
Gene Symbol: CYP24A1
CYP24A1
0.400 Biomarker disease CTD_human Mutations of the CYP24A1 gene, which encodes the 1,25-dihydroxyvitamin D-24-hydroxylase cytochrome P450, Cyp24A1, are predicted to result in elevated 1,25-dihydroxyvitamin D concentrations, hypercalcemia, hypercalciuria, nephrolithiasis, and bone disease. 22337913 2012
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.200 Biomarker disease BEFREE VDR BsmI, FokI, and ApaI gene polymorphisms were not associated with the risk of nephrolithiasis either in Asian and Caucasians populations, but VDR TaqI gene polymorphism was associated with nephrolithiasis in the Asian subjects. 30701705 2019
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Epidemiological studies observed that calcium nephrolithiasis was associated with polymorphisms of the CaSR gene regulatory region, rs6776158, located within the promoter-1, rs1501899 located in the intron 1, and rs7652589 in the 5'-untranslated region. 30446806 2019
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.200 GeneticVariation disease BEFREE The keywords used for the search were "vitamin D receptor or VDR" and "polymorphisms or SNPs" combined with "urolithiasis or nephrolithiasis". 31212049 2019
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.200 GeneticVariation disease BEFREE In conclusion, considering the large sample size, we believe that the SNP rs10735810 allele A in the VDR gene promoter region may influence the level of serum calcium, but not influence the formation of nephrolithiasis in a Han Chinese population. 29549381 2019
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.200 GeneticVariation disease BEFREE Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis. 31822280 2019
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Our study showed that CaSR rs7652589 polymorphism had a significant effect on the risk of developing calcium nephrolithiasis in the population of Yi nationality in Southwestern China. 29682741 2018
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Two SNPs in CaSR were genotyped using the TaqMan assay.We found that subjects carrying the G allele of rs6776158 (AG and GG) had significantly higher risk of nephrolithiasis compared to the AA genotype (P = .015 and .009, respectively).Our results indicate that rs6776158 polymorphism that might elevate the risk of nephrolithiasis in the Chinese population. 30407299 2018
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Our results provide evidences that the CaSR Arg990Gly polymorphism is associated with the risk of nephrolithiasis development in a Chinese population. 28609763 2017
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Associations of the calcium-sensing receptor gene CASR rs7652589 SNP with nephrolithiasis and secondary hyperparathyroidism in haemodialysis patients. 27739473 2016
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.200 GeneticVariation disease BEFREE Association of the BsmI, ApaI, TaqI, Tru9I and FokI Polymorphisms of the Vitamin D Receptor Gene with Nephrolithiasis in the Turkish Population. 26945655 2016
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 Biomarker disease BEFREE This study aimed to evaluate the association between genetic defects in vitamin D receptor (VDR), calcium sensing receptor (CaSR) and claudin 14 (CLDN14) genes and kidney stone disease in patients from eastern India. 26107257 2015
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE We identify sequence variants associating with kidney stones at ALPL (rs1256328[T], odds ratio (OR)=1.21, P=5.8 × 10(-10)) and a suggestive association at CASR (rs7627468[A], OR=1.16, P=2.0 × 10(-8)). 26272126 2015
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.200 GeneticVariation disease BEFREE This study aimed to evaluate the association between genetic defects in vitamin D receptor (VDR), calcium sensing receptor (CaSR) and claudin 14 (CLDN14) genes and kidney stone disease in patients from eastern India. 26107257 2015