Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1380
Gene Symbol: CR2
CR2
0.320 GeneticVariation disease BEFREE Single-nucleotide polymorphism 1 (rs3813946), located in the 5' untranslated region of the CR2 gene, altered transcriptional activity, suggesting a potential mechanism by which CR2 could contribute to the development of lupus. 17360460 2007
Entrez Id: 1380
Gene Symbol: CR2
CR2
0.320 GeneticVariation disease BEFREE These data confirm the effects of rs3813946 on CR2 transcription, identifying the 5' UTR to be a novel regulatory element for the CR2 gene in which variation may alter gene function and modify the development of lupus. 22673213 2012
Entrez Id: 2213
Gene Symbol: FCGR2B
FCGR2B
0.100 GeneticVariation disease BEFREE A single-nucleotide polymorphism in the transmembrane (TM) domain of FcγRIIB, FcγRIIB-T232, is associated with lupus. 27799621 2016
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.100 GeneticVariation disease BEFREE Three functional variants of IFN regulatory factor 5 (IRF5) define risk and protective haplotypes for human lupus. 17412832 2007
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.100 GeneticVariation disease BEFREE Given that the murine lupus susceptibility locus Nba2 includes the IFN-regulated genes Ifi202 (encoding for the p202 protein), Aim2 (encoding for the Aim2 protein), and Fcgr2b (encoding for the FcγRIIB receptor), we investigated whether the IRF5/Blimp-1 axis could regulate the expression of these genes. 22116829 2012
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.100 GeneticVariation disease BEFREE Given that the murine lupus susceptibility locus Nba2 includes the IFN-regulated genes Ifi202 (encoding for the p202 protein), Aim2 (encoding for the Aim2 protein), and Fcgr2b (encoding for the FcγRIIB receptor), we investigated whether the IRF5/Blimp-1 axis could regulate the expression of these genes. 22116829 2012
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.100 GeneticVariation disease BEFREE Interleukin-17A rs2275913, Interleukin-17F rs763780 and rs2397084 gene polymorphisms as possible risk factors in Juvenile lupus and lupus related nephritis. 26515887 2016
Entrez Id: 2213
Gene Symbol: FCGR2B
FCGR2B
0.100 GeneticVariation disease BEFREE Given that the murine lupus susceptibility locus Nba2 includes the IFN-regulated genes Ifi202 (encoding for the p202 protein), Aim2 (encoding for the Aim2 protein), and Fcgr2b (encoding for the FcγRIIB receptor), we investigated whether the IRF5/Blimp-1 axis could regulate the expression of these genes. 22116829 2012
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE The PTPN22 C1858T polymorphism is associated with skewing of cytokine profiles toward high interferon-alpha activity and low tumor necrosis factor alpha levels in patients with lupus. 18759295 2008
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE The allelic frequencies of the TNFa polymorphic variant (TNF2) of seventy lupus patients were determined during follow-up at the Medical Clinic of the National University Hospital Malaysia by PCR-RFLP technique. 15565953 2005
Entrez Id: 3663
Gene Symbol: IRF5
IRF5
0.100 GeneticVariation disease BEFREE Although we could not demonstrate susceptibility toward lupus in the presence of IRF5 rs2004640 (G/T) polymorphism, further exploration of the genetic variability of IRF5 may help uncover its pathogenic role in Indian SLE patients. 30168487 2018
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.100 GeneticVariation disease BEFREE Increased production and/or bioavailability of IFN-α and associated alterations in dendritic cell (DC) homeostasis have been linked to lupus pathogenesis. 21389264 2011
Entrez Id: 3663
Gene Symbol: IRF5
IRF5
0.100 GeneticVariation disease BEFREE Lineage-Specific Functionality of an Interferon Regulatory Factor 5 Lupus Risk Haplotype: Lack of B Cell Intrinsic Effects. 29867973 2018
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.100 GeneticVariation disease BEFREE Genetic polymorphisms of interleukin 6 and interleukin 10 in Egyptian patients with systemic lupus eythematosus. 26568585 2016
Entrez Id: 2213
Gene Symbol: FCGR2B
FCGR2B
0.100 GeneticVariation disease BEFREE Combined analysis of 4 groups of Asian patients strongly supported the association of the FCGR2B Thr187 allele with the lupus phenotype (P = 0.000159). 17133600 2006
Entrez Id: 3663
Gene Symbol: IRF5
IRF5
0.100 GeneticVariation disease BEFREE Importantly, our data suggest that in patients with lupus, the presence of the HLA lupus risk alleles in rs1270942 and rs3131379 increases the odds of also carrying the lupus risk allele in IRF5 (rs2070197) by 17% and 16%, respectively (P = 0.0028 and P = 0.0047, respectively). 21952918 2012
Entrez Id: 3663
Gene Symbol: IRF5
IRF5
0.100 GeneticVariation disease BEFREE A meta-analysis of the genetic association of the 16 SNPs across populations showed that TNFSF4, STAT4, ITGAM, and IRF5 were associated with lupus in a Hispanic Mestizo cohort enriched for European and Amerindian ancestry. 20848568 2010
Entrez Id: 2213
Gene Symbol: FCGR2B
FCGR2B
0.100 GeneticVariation disease BEFREE FcγRIIb-I232T is a hypofunctional polymorphism associated with lupus susceptibility in humans, an autoimmune disease linked to diminished deletion of autoreactive B cells. 29774664 2018
Entrez Id: 54106
Gene Symbol: TLR9
TLR9
0.100 GeneticVariation disease BEFREE Hence, this study was carried out to analyze the G to A and C to T transitions in TLR2 and TLR9 genes respectively and to test their association with lupus susceptibility, clinical and autoantibody phenotypes in South Indian Tamils. 25466615 2015
Entrez Id: 51284
Gene Symbol: TLR7
TLR7
0.100 GeneticVariation disease BEFREE To determine whether there is an increase in the number of TLR7 gene copies in patients diagnosed as having systemic lupus erythematosus (SLE) and whether gene amplification influences the autoantibody profiles in SLE patients, as has recently been reported in the BXSB/Yaa mouse model of lupus. 17907191 2007
Entrez Id: 3663
Gene Symbol: IRF5
IRF5
0.100 GeneticVariation disease BEFREE Association of interferon regulatory factor 5 (IRF5) markers with an increased risk of lupus and overlapping autoimmunity in a Kuwaiti population. 24697591 2015
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.100 GeneticVariation disease BEFREE Increased production and/or bioavailability of IFN-α and associated alterations in dendritic cell (DC) homeostasis have been linked to lupus pathogenesis. 21389264 2011
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.100 GeneticVariation disease BEFREE The aim of this study is to investigate whether the IL-6 -174 G/C polymorphism associates with lupus susceptibility or affects disease characteristics in Portuguese patients with SLE. 21153673 2011
Entrez Id: 3663
Gene Symbol: IRF5
IRF5
0.100 GeneticVariation disease BEFREE Three functional variants of IFN regulatory factor 5 (IRF5) define risk and protective haplotypes for human lupus. 17412832 2007
Entrez Id: 59067
Gene Symbol: IL21
IL21
0.100 GeneticVariation disease BEFREE Enhanced ABC formation in SWEF-deficient mice was controlled by the cytokine IL-21 and IRF5, whose variants are strongly associated with lupus. 29483597 2018