Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 29954
Gene Symbol: POMT2
POMT2
0.410 GeneticVariation disease BEFREE The most severe, which we called cobblestone lissencephaly A, was linked to mutations in POMT1 (34%), POMT2 (8%) and FKRP (1.5%). 22323514 2012
Entrez Id: 10585
Gene Symbol: POMT1
POMT1
0.410 GeneticVariation disease BEFREE The most severe, which we called cobblestone lissencephaly A, was linked to mutations in POMT1 (34%), POMT2 (8%) and FKRP (1.5%). 22323514 2012
Entrez Id: 160418
Gene Symbol: TMTC3
TMTC3
0.330 Biomarker disease BEFREE Our data identified TMTC3 as a synaptic protein that is involved in PVNH with ID and epilepsy, in addition to its previously described association with cobblestone lissencephaly. 28973161 2017
Entrez Id: 160418
Gene Symbol: TMTC3
TMTC3
0.330 Biomarker disease BEFREE Our data suggest that loss of TMTC3 causes COB with minimal eye or muscle involvement. 27773428 2016
Entrez Id: 160418
Gene Symbol: TMTC3
TMTC3
0.330 Biomarker disease BEFREE Our study demonstrates that TMTC3 regulates O-linked glycosylation and cadherin-mediated adherence, providing insight into its effect on cellular adherence and migration, as well the basis of TMTC3-associated Cobblestone lissencephaly. 31851597 2020
Entrez Id: 10329
Gene Symbol: RXYLT1
RXYLT1
0.110 GeneticVariation disease BEFREE All these cases displayed a severe phenotype of cobblestone lissencephaly A. TMEM5 mutations were frequently associated with gonadal dysgenesis and neural tube defects, and ISPD mutations were frequently associated with brain vascular anomalies. 23217329 2012
Entrez Id: 79147
Gene Symbol: FKRP
FKRP
0.110 GeneticVariation disease BEFREE The most severe, which we called cobblestone lissencephaly A, was linked to mutations in POMT1 (34%), POMT2 (8%) and FKRP (1.5%). 22323514 2012
Entrez Id: 729920
Gene Symbol: CRPPA
CRPPA
0.110 GeneticVariation disease BEFREE All these cases displayed a severe phenotype of cobblestone lissencephaly A. TMEM5 mutations were frequently associated with gonadal dysgenesis and neural tube defects, and ISPD mutations were frequently associated with brain vascular anomalies. 23217329 2012
Entrez Id: 2218
Gene Symbol: FKTN
FKTN
0.110 GeneticVariation disease BEFREE We describe four new patients with FKTN mutations and phenotypes ranging from: severe WWS in a Greek-Croatian patient, to congenital muscular dystrophy and cobblestone lissencephaly resembling MEB-FCMD in two Turkish patients, and limb-girdle muscular dystrophy and no mental retardation in a German patient. 20961758 2011
Entrez Id: 9289
Gene Symbol: ADGRG1
ADGRG1
0.010 GeneticVariation disease BEFREE Mutations in the GPR56 gene cause a malformed cerebral cortex in both humans and mice that resembles cobblestone lissencephaly, which is characterized by overmigration of neurons beyond the pial basement membrane. 21768377 2011
Entrez Id: 358
Gene Symbol: AQP1
AQP1
0.010 AlteredExpression disease BEFREE This work examines the levels of AQP1 and its dynamics in ventriculomegaly conditions such as congenital hydrocephalus (communicating and obstructive) or type II lissencephaly versus control. 31039249 2019
Entrez Id: 1605
Gene Symbol: DAG1
DAG1
0.010 Biomarker disease BEFREE During development, defects in the glycosylation of α-dystroglycan that impair its ability to interact with the extracellular matrix (ECM) are frequently associated with cobblestone lissencephaly and mental retardation. 22626542 2012
Entrez Id: 7175
Gene Symbol: TPR
TPR
0.010 GeneticVariation disease BEFREE Biallelic Mutations in TMTC3, Encoding a Transmembrane and TPR-Containing Protein, Lead to Cobblestone Lissencephaly. 27773428 2016
Entrez Id: 85416
Gene Symbol: ZIC5
ZIC5
0.010 Biomarker disease BEFREE Zic1, Zic2, Zic3, and Zic5 proteins are required for the development of neural crest derivatives, including the meningeal membrane and facial bones, and deficiency of these proteins causes cortical lamination defects resembling those in type II lissencephaly. 29442325 2018
Entrez Id: 7547
Gene Symbol: ZIC3
ZIC3
0.010 Biomarker disease BEFREE Zic1, Zic2, Zic3, and Zic5 proteins are required for the development of neural crest derivatives, including the meningeal membrane and facial bones, and deficiency of these proteins causes cortical lamination defects resembling those in type II lissencephaly. 29442325 2018
Entrez Id: 60626
Gene Symbol: RIC8A
RIC8A
0.010 Biomarker disease BEFREE All the discovered defects might be linked to aberrancies in cell adhesion and migration, suggesting that RIC8A has a crucial role in the regulation of cell-extracellular matrix interactions and that its removal leads to the phenotype characteristic to type II lissencephaly-associated diseases.Develop Neurobiol 78: 374-390, 2018. 29380551 2018
Entrez Id: 29954
Gene Symbol: POMT2
POMT2
0.410 Biomarker disease HPO
Entrez Id: 10585
Gene Symbol: POMT1
POMT1
0.410 Biomarker disease HPO
Entrez Id: 729920
Gene Symbol: CRPPA
CRPPA
0.110 Biomarker disease HPO
Entrez Id: 10329
Gene Symbol: RXYLT1
RXYLT1
0.110 Biomarker disease HPO
Entrez Id: 79147
Gene Symbol: FKRP
FKRP
0.110 Biomarker disease HPO
Entrez Id: 2218
Gene Symbol: FKTN
FKTN
0.110 Biomarker disease HPO
Entrez Id: 55624
Gene Symbol: POMGNT1
POMGNT1
0.100 Biomarker disease HPO
Entrez Id: 10381
Gene Symbol: TUBB3
TUBB3
0.100 Biomarker disease HPO
Entrez Id: 3912
Gene Symbol: LAMB1
LAMB1
0.100 Biomarker disease HPO