Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 22983
Gene Symbol: MAST1
MAST1
0.010 GeneticVariation disease BEFREE Using exome sequencing, we identified a novel missense variant c.3539T>G, p.(Leu1180Arg) in MAST1 in an Emirati patient with intellectual disability, microcephaly, and dysmorphic features. 31721002 2020
Entrez Id: 83737
Gene Symbol: ITCH
ITCH
0.010 GeneticVariation disease BEFREE Biallelic human ITCH variants causing a multisystem disease with dysmorphic features: A second report. 31091003 2019
Entrez Id: 6664
Gene Symbol: SOX11
SOX11
0.010 GeneticVariation disease BEFREE De novo SOX11 heterozygous mutations have been shown to cause intellectual disability, growth deficiency, and dysmorphic features compatible with mild Coffin-Siris syndrome. 30661772 2019
Entrez Id: 2783
Gene Symbol: GNB2
GNB2
0.010 GeneticVariation disease BEFREE Exome reports A de novo GNB2 variant associated with global developmental delay, intellectual disability, and dysmorphic features. 31698099 2019
Entrez Id: 132
Gene Symbol: ADK
ADK
0.010 Biomarker disease BEFREE Adenosine kinase (ADK) deficiency (OMIM [online mendelian inheritance in man]: 614300) is an autosomal recessive disorder of adenosine and methionine metabolism, with a unique clinical phenotype, mainly involving the central nervous system and dysmorphic features. 30477030 2019
Entrez Id: 4131
Gene Symbol: MAP1B
MAP1B
0.010 GeneticVariation disease BEFREE MAP1B mutations have recently been associated with a phenotype including periventricular nodular heterotopia (PVNH), intellectual disability (ID), seizures, and dysmorphic features. 31317654 2019
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.010 GeneticVariation disease BEFREE Germline variants in PIK3CA are associated to a mild phenotype characterized by overgrowth, severe macrocephaly, mild intellectual disability, and few dysmorphic features. 31290289 2019
Entrez Id: 7531
Gene Symbol: YWHAE
YWHAE
0.010 Biomarker disease BEFREE While previous literature has hypothesized dysmorphic features and white matter changes related to YWHAE, our cohort contributes evidence to the presence of additional genetic changes within 17p13.3 required for proper brain development. 30568308 2019
Entrez Id: 1656
Gene Symbol: DDX6
DDX6
0.010 GeneticVariation disease BEFREE Here, we report the identification of five rare de novo missense variants in DDX6 in probands presenting with intellectual disability, developmental delay, and similar dysmorphic features including telecanthus, epicanthus, arched eyebrows, and low-set ears. 31422817 2019
Entrez Id: 2313
Gene Symbol: FLI1
FLI1
0.010 Biomarker disease BEFREE It also supports that combined ETS1 and FLI1 haploinsufficiency explains dysmorphic features, notably ears, and nose anomalies. 30888095 2019
Entrez Id: 26173
Gene Symbol: INTS1
INTS1
0.010 GeneticVariation disease BEFREE We also report additional clinical data on three previously described individuals with a homozygous, loss of function variant, p.(Ser1784*) in INTS1 that shared cognitive delays, cataracts and dysmorphic features with these patients. 30622326 2019
Entrez Id: 23135
Gene Symbol: KDM6B
KDM6B
0.010 GeneticVariation disease BEFREE Genetic variants in the KDM6B gene are associated with neurodevelopmental delays and dysmorphic features. 31124279 2019
Entrez Id: 65109
Gene Symbol: UPF3B
UPF3B
0.010 Biomarker disease BEFREE This is the first report of a premature termination codon before the three functional domains of the UPF3B protein and these results directly implicate the absence of these domains with XLID, autism and some dysmorphic features. 31737052 2019
Entrez Id: 738
Gene Symbol: VPS51
VPS51
0.010 Biomarker disease BEFREE By exome sequencing, we have identified compound heterozygous mutations in the gene encoding the shared GARP/EARP subunit VPS51 in a 6-year-old patient with severe global developmental delay, microcephaly, hypotonia, epilepsy, cortical vision impairment, pontocerebellar abnormalities, failure to thrive, liver dysfunction, lower extremity edema and dysmorphic features. 30624672 2019
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.010 GeneticVariation disease BEFREE PRRT2 gene variant in a child with dysmorphic features, congenital microcephaly, and severe epileptic seizures: genotype-phenotype correlation? 31801583 2019
Entrez Id: 23347
Gene Symbol: SMCHD1
SMCHD1
0.010 Biomarker disease BEFREE None of the patients with FSHD2 or family members demonstrated any congenital defects or dysmorphic features commonly found in patients with BAMS. 29980640 2018
Entrez Id: 23334
Gene Symbol: SZT2
SZT2
0.010 GeneticVariation disease BEFREE Recently, biallelic SZT2 mutations were found in 7 patients (from 5 families) presenting with epileptic encephalopathy with dysmorphic features and/or non-syndromic intellectual disabilities. 28556953 2018
Entrez Id: 2969
Gene Symbol: GTF2I
GTF2I
0.010 Biomarker disease BEFREE The dysmorphic features observed in WBS were specific and manifested in majority of cases. 30380201 2018
Entrez Id: 1028
Gene Symbol: CDKN1C
CDKN1C
0.010 Biomarker disease BEFREE The dysmorphic features observed in WBS were specific and manifested in majority of cases. 30380201 2018
Entrez Id: 80155
Gene Symbol: NAA15
NAA15
0.010 GeneticVariation disease BEFREE Further supporting a mechanism of haploinsufficiency, individuals with copy-number variant (CNV) deletions involving NAA15 and surrounding genes can present with mild intellectual disability, mild dysmorphic features, motor delays, and decreased growth. 29656860 2018
Entrez Id: 55699
Gene Symbol: IARS2
IARS2
0.010 Biomarker disease BEFREE Additionally, this study suggests that adult patients with CAGSSS may manifest central adrenal insufficiency and type II esophageal achalasia and proposes that a variable sensorineural hearing loss onset, proportionate short stature, polyneuropathy, and mild dysmorphic features are possible, as seen in patient 1. 30419932 2018
Entrez Id: 7468
Gene Symbol: NSD2
NSD2
0.010 GeneticVariation disease BEFREE De novo nonsense mutation in WHSC1 (NSD2) in patient with intellectual disability and dysmorphic features. 29760529 2018
Entrez Id: 4212
Gene Symbol: MEIS2
MEIS2
0.010 GeneticVariation disease BEFREE De novo missense variants in MEIS2 recapitulate the microdeletion phenotype of cardiac and palate abnormalities, developmental delay, intellectual disability and dysmorphic features. 30055086 2018
Entrez Id: 246329
Gene Symbol: STAC3
STAC3
0.010 GeneticVariation disease BEFREE STAC3 variants cause a congenital myopathy with distinctive dysmorphic features and malignant hyperthermia susceptibility. 30168660 2018
Entrez Id: 284098
Gene Symbol: PIGW
PIGW
0.010 GeneticVariation disease BEFREE An infant was homozygous for variants in PIGW (c.199C>G; p.Pro67Ala) with an associated phenotype of infantile spasms, myoclonic seizures, cortical visual impairment, developmental delay, and minor dysmorphic features. 30078644 2018