Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9314
Gene Symbol: KLF4
KLF4
0.010 Biomarker disease BEFREE Mechanistically, KLF4 regulated the HHcy-induced decrease in HA-VSMC autophagy via the m-TOR signaling pathway. 31028566 2019
Entrez Id: 5175
Gene Symbol: PECAM1
PECAM1
0.010 AlteredExpression disease BEFREE Expression of platelet endothelial cell adhesion molecule (PECAM) was decreased in the microvessels from HHcy animals supplemented with NaHS. 31146011 2019
Entrez Id: 55937
Gene Symbol: APOM
APOM
0.010 AlteredExpression disease BEFREE We found that decreased serum apoM levels corresponded with serum HDL levels in HHcy patients, while the serum apoM levels showed a statistically significant negative correlation with the serum Hcy levels. 30854963 2019
Entrez Id: 1025
Gene Symbol: CDK9
CDK9
0.010 AlteredExpression disease BEFREE By using the Toll-like receptor 4 (TLR4)-specific inhibitor TAK-242 or TLR4-deficient macrophages, we found that culture supernatants from Hcy-activated B cells and HHcy plasma IgG polarized inflammatory macrophages in a TLR4-dependent manner. 31782769 2019
Entrez Id: 2308
Gene Symbol: FOXO1
FOXO1
0.010 Biomarker disease BEFREE We conclude that GYY4137 and/or AS1842856 mitigates HHcy induced mesangial cell damage and ECM remodelling by regulating Akt/FOXO1 pathway. 31085234 2019
Entrez Id: 30001
Gene Symbol: ERO1A
ERO1A
0.010 AlteredExpression disease BEFREE Here, we show that Hcy induces ER oxidoreductin-1α (Ero1α) expression with ER stress and inflammation in human umbilical vein endothelial cells and in the arteries of HHcy mice. 30292945 2019
Entrez Id: 930
Gene Symbol: CD19
CD19
0.010 Biomarker disease BEFREE Finally, quantum dots (QDs) were packaged with PKM2-null T cell EVs and anti-CD19 antibody to exert B-cell targeting and inhibit IgG production, eventually ameliorating HHcy-accelerated atherosclerosis <i>in vivo.</i> Thus, PKM2-mediated EV ceramides in T cells may be an important cargo for T-cell-regulated B cell IgG production, and QD-CD19-PKM2-null T cell EVs hold high potential to treat B cell overactivation-related diseases.-Yang, J., Dang, G., Lü, S., Liu, H., Ma, X., Han, L., Deng, J., Miao, Y., Li, X., Shao, F., Jiang, C., Xu, Q., Wang, X., Feng, J. T-cell-derived extracellular vesicles regulate B-cell IgG production <i>via</i> pyruvate kinase muscle isozyme 2. 31480861 2019
Entrez Id: 2006
Gene Symbol: ELN
ELN
0.010 AlteredExpression disease BEFREE The study reveals that lens accumulation of Hcy associated with hyperhomocysteinaemia is characteristic of PXF that augments elastin expression. 30249767 2019
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 AlteredExpression disease BEFREE Compared with the control group, the rats in the HHcy group showed the following: (1) higher levels of total plasma homocysteine; (2) fewer neuronal nitric oxide synthase-positive cells in the corpus cavernous; (3) higher levels of reactive oxygen species and malondialdehyde, higher expression levels of nicotinamide adenine dinucleotide phosphate oxidase, and lower activities of superoxide dismutase, indicating an overactivated oxidative stress; (4) lower expression levels of Erk1/2/Nrf2/HO-1 signaling pathway components; and (5) higher levels of apoptosis, as determined by the expression levels of Bax, Bcl-2, and caspase 3. 31439521 2019
Entrez Id: 7077
Gene Symbol: TIMP2
TIMP2
0.010 AlteredExpression disease BEFREE Our results show that Hhcy induced by an excess of methionine causes, in the myocardium of Psammomys obesus, a significant accumulation of fibrillar collagens I and III at the interstitial and perivascular scales, indicating the appearance of fibrosis, which is associated with an immuno-expression increase of TGF-β1, MMP-9 and TIMP-2 and an immuno-expression decrease of MMP-2 and TIMP-1. 31377002 2019
Entrez Id: 199
Gene Symbol: AIF1
AIF1
0.010 Biomarker disease BEFREE NaHS supplementation reduced the expression of glial fibrillary acidic protein (GFAP) and ionized calcium binding adaptor molecule 1 (Iba1) suggesting attenuation of astrocyte and microglia activation in HHcy animals. 31146011 2019
Entrez Id: 2882
Gene Symbol: GPX7
GPX7
0.010 AlteredExpression disease BEFREE By contrast, the antioxidant pathway mediated by ER glutathione peroxidase 7 (GPx7) is downregulated in HHcy mice. 30292945 2019
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.010 Biomarker disease BEFREE We found that impaired autophagy, as evidenced by decreased levels of MAP1LC3B II/MAP1LC3B I, has a vital role in HHcy-induced human aortic (HA)-VSMC phenotypic switching, with a decrease in contractile proteins (SM α-actin and calponin) and an increase in osteopontin. 31028566 2019
Entrez Id: 5079
Gene Symbol: PAX5
PAX5
0.010 GeneticVariation disease BEFREE Hypertension in ALL 2 was associated with dyslipidemia (p < 0.01) while in ALL 3 hypertension was associated with hyperhomocysteinemia (hHCY, p < 0.001), arterial stiffness and dyslipidemia (p < 0.01). 29483588 2018
Entrez Id: 654231
Gene Symbol: OCM
OCM
0.010 Biomarker disease BEFREE To (i) explore genetic sources of Hcys and the causal role of HHcys in As-induced skin lesion development using OCM genetic proxies for HHcys and (ii) identify OCM SNPs associated with urinary As metabolite proportions and/or skin lesion incidence. 29421402 2018
Entrez Id: 128
Gene Symbol: ADH5
ADH5
0.010 Biomarker disease BEFREE GSNOR knockout or GSNO stimulation rectified HHcy-induced inflammatory cytokine secretion and T-cell proliferation. 29860106 2018
Entrez Id: 8600
Gene Symbol: TNFSF11
TNFSF11
0.010 Biomarker disease BEFREE Hydrogen sulfide epigenetically mitigates bone loss through OPG/RANKL regulation during hyperhomocysteinemia in mice. 29908298 2018
Entrez Id: 5293
Gene Symbol: PIK3CD
PIK3CD
0.010 Biomarker disease BEFREE The HepG2 cell lines transfected with siRNA directed to PCSK9 were challenged with Hcy, homocysteine thiolactone (HTL), testosterone, 5α-dihydroxytestosterone (5α-DHT), or estradiol for 24 h. Rats administered with Hcy developed HHcy and displayed PCOS-like phenotypes with adversely altered lipid homeostasis and attenuated PI3K-AKT and Wnt signalling cascade. 29660344 2018
Entrez Id: 101054525
Gene Symbol: PGR-AS1
PGR-AS1
0.010 Biomarker disease BEFREE Together, these findings suggest that strategies aimed at blocking the AT1 receptor may mitigate HHcy-associated aneurysmal vascular injuries. 29296021 2018
Entrez Id: 472
Gene Symbol: ATM
ATM
0.010 Biomarker disease BEFREE Together, these findings suggest that strategies aimed at blocking the AT1 receptor may mitigate HHcy-associated aneurysmal vascular injuries. 29296021 2018
Entrez Id: 1080
Gene Symbol: CFTR
CFTR
0.010 AlteredExpression disease BEFREE In this study, CBS<sup>+/-</sup> mice were fed with regular diet for 12 weeks to establish a hyperhomocysteinemia (HHcy) model and HL-7702 cells were treated with Hcy, we found that Hcy increases autophagy and aggravates liver injury by downregulation of cystic fibrosis transmembrane conductance regulator (CFTR) expression in vivo and in vitro. 29415998 2018
Entrez Id: 3108
Gene Symbol: HLA-DMA
HLA-DMA
0.010 AlteredExpression disease BEFREE While HHcys and decreased %DMA were associated with increased risk for skin lesions, and MTHFR 677 C ➔ T was a strong predictor of HHcys, MTHFR 677 C ➔ T was not associated with skin lesion risk. 29421402 2018
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.010 Biomarker disease BEFREE In the animal model of diet-induced hyperhomocysteinemia (HHcy), we observed the similar findings that SIRT1/PGC-1α/PPAR-γ cascades were downregulated with elevated MMP-13 and COX-2. 29413962 2018
Entrez Id: 4982
Gene Symbol: TNFRSF11B
TNFRSF11B
0.010 Biomarker disease BEFREE Hydrogen sulfide epigenetically mitigates bone loss through OPG/RANKL regulation during hyperhomocysteinemia in mice. 29908298 2018
Entrez Id: 4137
Gene Symbol: MAPT
MAPT
0.010 Biomarker disease BEFREE Complementary to, an immunohistochemical analysis of tau protein and β-amyloid peptide showed that combination of hHcy with the IRI might lead to the progression of AD-like pathological features. 30003389 2018