Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23415
Gene Symbol: KCNH4
KCNH4
0.010 Biomarker disease BEFREE Three genes (KATA2, KCNH4, and STAT5B) may contribute to intellectual deficiency. 23337768 2013
Entrez Id: 4128
Gene Symbol: MAOA
MAOA
0.010 Biomarker disease BEFREE MAOB deficient patients exhibit normal clinical characteristics and behavior, while MAOA deficient patients have borderline intellectual deficiency and impaired impulse control. 22365943 2012
Entrez Id: 4129
Gene Symbol: MAOB
MAOB
0.010 Biomarker disease BEFREE Patients who lack both MAOA and MAOB have the most extreme laboratory values (urine, blood, and CSF serotonin 4-6 times normal, with elevated O-methylated amine metabolites and reduced deaminated metabolites) in addition to severe intellectual deficiency and behavioral problems. 22365943 2012
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
0.010 Biomarker disease BEFREE Using a clinical oligonucleotide array comparative genomic hybridization (aCGH), we have identified an ∼317 kb hemizygous deletion in 10q24.32, involving PITX3 in a 17-year-old male with a Smith-Magenis syndrome-like phenotype, including mild intellectual impairment, sleep disturbance, hyperactivity, and aggressive and self-destructive behavior. 22223473 2012
Entrez Id: 2303
Gene Symbol: FOXC2
FOXC2
0.010 GeneticVariation disease BEFREE Thus, it is likely that the microcephaly, distichiasis, vesicoureteral, and intellectual impairment in this family may be caused by the deletion of one or more of these genes and/or deletion of distant cis-regulatory elements of FOXC2 expression. 22407726 2012
Entrez Id: 2290
Gene Symbol: FOXG1
FOXG1
0.010 Biomarker disease BEFREE 4.45 Mb microduplication in chromosome band 14q12 including FOXG1 in a girl with refractory epilepsy and intellectual impairment. 19772934 2010
Entrez Id: 57704
Gene Symbol: GBA2
GBA2
0.010 GeneticVariation disease BEFREE A new locus (SPG46) maps to 9p21.2-q21.12 in a Tunisian family with a complicated autosomal recessive hereditary spastic paraplegia with mental impairment and thin corpus callosum. 20593214 2010
Entrez Id: 2874
Gene Symbol: GPS2
GPS2
0.010 Biomarker disease BEFREE The 3 tumor suppressor genes KCTD11, DLG4, and GPS2, in addition to the GABARAP gene, have a known or suspected function in neuronal development and are candidates for causing mental impairment in our patients. 19617690 2009
Entrez Id: 11337
Gene Symbol: GABARAP
GABARAP
0.010 GeneticVariation disease BEFREE The 3 tumor suppressor genes KCTD11, DLG4, and GPS2, in addition to the GABARAP gene, have a known or suspected function in neuronal development and are candidates for causing mental impairment in our patients. 19617690 2009
Entrez Id: 1742
Gene Symbol: DLG4
DLG4
0.010 Biomarker disease BEFREE The 3 tumor suppressor genes KCTD11, DLG4, and GPS2, in addition to the GABARAP gene, have a known or suspected function in neuronal development and are candidates for causing mental impairment in our patients. 19617690 2009
Entrez Id: 64324
Gene Symbol: NSD1
NSD1
0.010 GeneticVariation disease BEFREE Haploinsufficiency of the NSD1 gene leads to Sotos syndrome (Sos), which is characterised by excessive growth, especially during childhood, distinct craniofacial features and variable degree of mental impairment. 17561922 2007
Entrez Id: 26609
Gene Symbol: VCX
VCX
0.010 Biomarker disease BEFREE Moreover, we propose a VCX/Y teamwork-dependent mechanism for the incidence of mental impairment in XLI patients. 15888481 2005
Entrez Id: 4846
Gene Symbol: NOS3
NOS3
0.010 GeneticVariation disease BEFREE The results suggest that NOS3 genotyping might identify individuals that are susceptible to intellectual impairment following ALL treatment. 16013960 2005
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.010 GeneticVariation disease BEFREE The effect of either ApoE epsilon4 allele and BDNF genetic variant on the neuropsychological pattern of mental impairment was examined both in terms of group differences in performance on the neuropsychological tests between carriers and non-carriers of each variant and by selecting the best predictor of cognitive performance among demographic and genetic factors by means of a multiple regression analysis. 15337270 2004
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 GeneticVariation disease BEFREE The effect of either ApoE epsilon4 allele and BDNF genetic variant on the neuropsychological pattern of mental impairment was examined both in terms of group differences in performance on the neuropsychological tests between carriers and non-carriers of each variant and by selecting the best predictor of cognitive performance among demographic and genetic factors by means of a multiple regression analysis. 15337270 2004
Entrez Id: 1741
Gene Symbol: DLG3
DLG3
0.010 Biomarker disease BEFREE The disruption of NMDA receptor targeting or signaling, as a result of the loss of SAP102, may lead to altered synaptic plasticity and may explain the intellectual impairment observed in individuals with DLG3 mutations. 15185169 2004
Entrez Id: 10752
Gene Symbol: CHL1
CHL1
0.010 Biomarker disease BEFREE In humans, CHL1 (also referred to as CALL) is a candidate gene for 3p- syndrome-associated mental impairment. 12391163 2002
Entrez Id: 26580
Gene Symbol: BSCL2
BSCL2
0.010 GeneticVariation disease BEFREE The higher prevalence of intellectual impairment and the increased risk of premature death in BSCL2 compared to BSCL1 emphasise the importance of molecular diagnosis of this syndrome and have clear implications for genetic counselling. 12362029 2002
Entrez Id: 10555
Gene Symbol: AGPAT2
AGPAT2
0.010 GeneticVariation disease BEFREE The higher prevalence of intellectual impairment and the increased risk of premature death in BSCL2 compared to BSCL1 emphasise the importance of molecular diagnosis of this syndrome and have clear implications for genetic counselling. 12362029 2002
Entrez Id: 3908
Gene Symbol: LAMA2
LAMA2
0.010 GeneticVariation disease BEFREE In the first category, without intellectual impairment or major structural brain abnormalities, half of the cases are merosin deficient due to mutations of the laminin alpha 2 chain gene. 11562568 2001
Entrez Id: 106478973
Gene Symbol: FMR1-IT1
FMR1-IT1
0.010 GeneticVariation disease BEFREE The presence of a full mutation in the FMR-1 gene seemed decisive for the occurrence of mental impairment in the patient. 8069653 1993
Entrez Id: 57532
Gene Symbol: NUFIP2
NUFIP2
0.020 Biomarker disease BEFREE Fragile X syndrome (FXS) is an inherited intellectual impairment that results from the loss of fragile X mental retardation protein (FMRP), an mRNA binding protein that regulates mRNA translation at synapses. 31350260 2019
Entrez Id: 338811
Gene Symbol: TAFA2
TAFA2
0.020 Biomarker disease BEFREE Among them, Tafa-2 is identified as one of the potential genes responsible for intellectual deficiency in a patient with mild mental retardation. 30137205 2018
Entrez Id: 1859
Gene Symbol: DYRK1A
DYRK1A
0.020 GeneticVariation disease BEFREE Functional characterization of DYRK1A missense variants associated with a syndromic form of intellectual deficiency and autism. 29700199 2018
Entrez Id: 1756
Gene Symbol: DMD
DMD
0.020 GeneticVariation disease BEFREE Dystrophin gene mutation positions were dichotomized into groups (upstream versus downstream of exon 43, location of isoforms previously linked to intellectual impairment). 30375314 2018