Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Among patients with non-MSI-high cancer, BRAF mutation status emerged as a distinct marker with higher connectivity in the network of proximal colon cancer, but not in distal colorectal cancer. 28623901 2017
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.400 Biomarker disease BEFREE To investigate the relationship between PSF and PPARγ in colon cancer, we evaluated the effects of PSF expression in DLD-1 and HT-29 colon cancer cell lines, which express low and high levels of PPARγ, respectively PSF affected the ability of PPARγ to bind, and expression of PSF siRNA significantly suppressed the proliferation of colon cancer cells. 23516550 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE The mutational status of KRAS and BRAF(V600E) oncogenes combined with analysis of the DNA mismatch repair system with/without the CpG island methylator phenotype (CIMP) has been shown to identify colon cancer subtypes with distinct clinical features and prognoses. 26872400 2016
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.400 GeneticVariation disease BEFREE High lutein intake [odds ratio (OR), 0.63; 95% confidence interval (95% CI), 0.44-0.89], low refined grain intake (OR, 0.70; 95% CI, 0.53-0.94), or a high prudent diet score (OR, 0.66; 95% CI, 0.49-0.89) and PA/AA PPARgamma genotype were associated with reduced colon cancer risk. 15894676 2005
Entrez Id: 6714
Gene Symbol: SRC
SRC
0.400 AlteredExpression disease BEFREE Dual inhibition of MET and SRC kinase activity as a combined targeting strategy for colon cancer. 28810597 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE The aim of this study was to investigate the influence of BRAF and KRAS mutation status on the association between aspirin use and overall survival after colon cancer diagnosis. 28125730 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE A novel case of rhabdoid colon carcinoma associated with a positive CpG island methylator phenotype and BRAF mutation. 21315413 2011
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE We have tested a battery of melanoma and colon carcinoma cell lines that carry mutations in BRAF, NRAS and KRAS genes and have observed that those with NRAS and KRAS mutations are more sensitive to killing by IPA3. 22869096 2012
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE To date, identification of HER2 expression in gastric adenocarcinoma and KRAS, NRAS and BRAF mutations in colon cancer have proved essential for treatment decisions. 28067073 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer. 25884297 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 Biomarker disease BEFREE These findings illustrate the utility of non-invasive PET imaging measures of glutamine uptake to selectively predict response to BRAF-targeted therapy in colon cancer and may suggest further opportunities to inform colon cancer clinical trials using targeted therapies against MAPK activation. 27770401 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE A set of 668 stage II and III CC samples from the PETACC-3 (Pan-European Trails in Alimentary Tract Cancers) clinical trial were used to assess differential gene expression between c.1799T>A (p.V600E) BRAF mutant and non-BRAF, non-KRAS mutant cancers (double wild type) and to construct a gene expression-based classifier for detecting BRAF mutant samples with high sensitivity. 22393095 2012
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE BRAF mutations in colon cancer are not likely attributable to defective DNA mismatch repair. 14500346 2003
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.400 AlteredExpression disease BEFREE The activation of peroxisome proliferator-activated receptor gamma stimulated by thiazolidinedione is useful in the treatment of type II diabetes mellitus and may have value in preventing inflammatory bowel disease or colon cancer. 12946210 2003
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.400 AlteredExpression disease BEFREE In addition, PPARgamma protein levels are elevated, possibly through sequestration by activated beta-catenin in colon cancer cell lines. 15665104 2005
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.400 Biomarker disease BEFREE This finding suggests a potentially important use for PPARgamma ligands as chemopreventative agents in colon cancer. 12370429 2002
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Serine/threonine kinase B-Raf proto-oncogene (BRAF) mutant colon cancer has a poor prognosis and there is an absence of targeted treatments for this subtype. 30396937 2018
Entrez Id: 2065
Gene Symbol: ERBB3
ERBB3
0.400 Biomarker disease BEFREE Using a kinome-centered synthetic lethality screen, we find that suppression of the ERBB3 receptor tyrosine kinase sensitizes KRAS mutant lung and colon cancer cells to MEK inhibitors. 24685132 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Patient and tumor characteristics and BRAF and KRAS mutations in colon cancer, NCCTG/Alliance N0147. 24925349 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE These data suggest that the BRAF V600E mutation is not the target gene for abnormal MMR in carcinogenesis in patients with sporadic endometrial cancer, unlike in colon cancer. 19424571 2009
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE BRAF (V600E) and KRAS mutations were analyzed in node-positive colon cancer patients (n = 3305) treated with FOLFOX-based chemotherapy in an adjuvant trial (Alliance N0147). 26160882 2015
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.400 Biomarker disease BEFREE Finally, EPA suppressed HT-29 cell growth and this effect was significantly reversed by the addition of GW, suggesting that in part the physiological actions of EPA are the result of PPARgamma activation. 18203887 2008
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE CRC primaries had a lower incidence of PIK3CA and BRAF mutations in rectal cancer versus colon cancer (10% and 3.3%, respectively). 26553611 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE BRAF mutations were less frequent in colon cancer patients below 50 years relative to patients above 50 years (p-value: 0.044). 20444249 2010
Entrez Id: 4595
Gene Symbol: MUTYH
MUTYH
0.400 GeneticVariation disease BEFREE The ORs for the MUTYH Gln324His and the APEX1 Asp148Glu were statistically significant for colon cancer (adjusted OR 3.95, 95%CI 1.28-12.20, p = 0.017 for MUTYH Gln324His ; adjusted OR 3.04, 95%CI 1.38-6.71, p = 0.006 for APEX1 Asp148Glu). 18823566 2008