Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4684
Gene Symbol: NCAM1
NCAM1
0.100 Biomarker disease BEFREE "PSA-NCAM positive neuroblastoma cells" should have read "PSA-NCAM positive neuroblasts". 30824689 2019
Entrez Id: 367
Gene Symbol: AR
AR
0.080 Biomarker disease BEFREE <b>Conclusion:</b> Our results suggested that androgen receptor may involve in the progression of neuroblastoma as well as provided insight into a new target for the diagnosis and treatment of neuroblastoma patients. 28326012 2017
Entrez Id: 142
Gene Symbol: PARP1
PARP1
0.100 AlteredExpression disease BEFREE <b>Methods:</b> Using a radiolabeled poly(ADP-ribose) polymerase (PARP) inhibitor, <sup>125</sup>I-KX1, we delivered an Auger emitter iodine-125 to PARP-1: a chromatin-binding enzyme overexpressed in neuroblastoma. 31676730 2019
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 Biomarker disease BEFREE <b>Purpose:</b> Anaplastic lymphoma kinase (<i>ALK</i>) is the most frequently mutated oncogene in the pediatric cancer neuroblastoma. 27986745 2017
Entrez Id: 5133
Gene Symbol: PDCD1
PDCD1
0.020 Biomarker disease BEFREE <b>Purpose:</b> This study sought to evaluate the expression of programmed cell death-ligand-1 (PD-L1) and HLA class I on neuroblastoma cells and programmed cell death-1 (PD-1) and lymphocyte activation gene 3 (LAG3) on tumor-infiltrating lymphocytes to better define patient risk stratification and understand whether this tumor may benefit from therapies targeting immune checkpoint molecules.<b>Experimental Design:</b><i>In situ</i> IHC staining for PD-L1, HLA class I, PD-1, and LAG3 was assessed in 77 neuroblastoma specimens, previously characterized for tumor-infiltrating T-cell density and correlated with clinical outcome. 28270499 2017
Entrez Id: 3902
Gene Symbol: LAG3
LAG3
0.010 Biomarker disease BEFREE <b>Purpose:</b> This study sought to evaluate the expression of programmed cell death-ligand-1 (PD-L1) and HLA class I on neuroblastoma cells and programmed cell death-1 (PD-1) and lymphocyte activation gene 3 (LAG3) on tumor-infiltrating lymphocytes to better define patient risk stratification and understand whether this tumor may benefit from therapies targeting immune checkpoint molecules.<b>Experimental Design:</b><i>In situ</i> IHC staining for PD-L1, HLA class I, PD-1, and LAG3 was assessed in 77 neuroblastoma specimens, previously characterized for tumor-infiltrating T-cell density and correlated with clinical outcome. 28270499 2017
Entrez Id: 1113
Gene Symbol: CHGA
CHGA
0.100 Biomarker disease BEFREE <b>Purpose:</b> We determined whether quantifying neuroblastoma-associated mRNAs (NB-mRNAs) in bone marrow and blood improves assessment of disease and prediction of disease progression in patients with relapsed/refractory neuroblastoma.<b>Experimental Design:</b> mRNA for CHGA, DCX, DDC, PHOX2B, and TH was quantified in bone marrow and blood from 101 patients concurrently with clinical disease evaluations. 28559462 2017
Entrez Id: 4920
Gene Symbol: ROR2
ROR2
0.010 AlteredExpression disease BEFREE <b>Results:</b> Both ROR1 and ROR2 are expressed across all stages of NBL. 31441359 2019
Entrez Id: 407040
Gene Symbol: MIR34A
MIR34A
0.100 AlteredExpression disease BEFREE <b>Results:</b> The expression level of miR-34a was decreased (<i>p</i> < .05) while the expression level of HNF4α was increased (<i>p</i> < .05) in paediatric neuroblastoma tissues. 31343368 2019
Entrez Id: 3172
Gene Symbol: HNF4A
HNF4A
0.040 AlteredExpression disease BEFREE <b>Results:</b> The expression level of miR-34a was decreased (<i>p</i> < .05) while the expression level of HNF4α was increased (<i>p</i> < .05) in paediatric neuroblastoma tissues. 31343368 2019
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 Biomarker disease BEFREE <i>ALK-I19</i> was detected in 14/37 (38%) tumors from patients with newly diagnosed NB. 29535836 2018
Entrez Id: 407006
Gene Symbol: MIR221
MIR221
0.030 GeneticVariation disease BEFREE <i>In silico</i> analysis demonstrated that none of the miR-221 target genes belonged to heme biosynthetic processes found altered in children with neuroblastoma, whereas two genes associated with mitochondria. 29721180 2018
Entrez Id: 51741
Gene Symbol: WWOX
WWOX
0.030 Biomarker disease BEFREE <i>In vitro</i> analysis revealed that knockdown of WWOX protein in neuroblastoma cells results in aggregation of TRAPPC6AΔ, TIAF1, amyloid β, and Tau in a sequential manner. 30158849 2018
Entrez Id: 4763
Gene Symbol: NF1
NF1
0.100 AlteredExpression disease BEFREE 12-O-tetradecanoyl-phorbol-13-acetate-dependent up-regulation of dopaminergic gene expression requires Ras and neurofibromin in human IMR-32 neuroblastoma. 16635257 2006
Entrez Id: 100302142
Gene Symbol: MIR1246
MIR1246
0.010 AlteredExpression disease BEFREE 125I radiation downregulates TRPV1 expression through miR‑1246 in neuroblastoma cells. 31059092 2019
Entrez Id: 3250
Gene Symbol: HPR
HPR
0.070 AlteredExpression disease BEFREE 4-HPR + ABT-199 was highly synergistic against high BCL-2-expressing neuroblastoma cell lines and significantly improved event-free survival of mice carrying high BCL-2-expressing patient-derived xenografts (PDX). 31484706 2019
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.100 AlteredExpression disease BEFREE 4-HPR + ABT-199 was highly synergistic against high BCL-2-expressing neuroblastoma cell lines and significantly improved event-free survival of mice carrying high BCL-2-expressing patient-derived xenografts (PDX). 31484706 2019
Entrez Id: 3642
Gene Symbol: INSM1
INSM1
0.040 AlteredExpression disease BEFREE 5'-Iodotubercidin treatment and INSM1 inhibition suppressed extracellular signal-regulated kinase 1/2 (ERK1/2) activity and the AKT signaling pathways required for NB cell proliferation. 30755485 2019
Entrez Id: 5595
Gene Symbol: MAPK3
MAPK3
0.100 AlteredExpression disease BEFREE 5'-Iodotubercidin treatment and INSM1 inhibition suppressed extracellular signal-regulated kinase 1/2 (ERK1/2) activity and the AKT signaling pathways required for NB cell proliferation. 30755485 2019
Entrez Id: 8878
Gene Symbol: SQSTM1
SQSTM1
0.050 AlteredExpression disease BEFREE 6-OHDA treatment failed to suppress mTOR/S6K phosphorylation and to increase LC3 conversion, p62 degradation and cytoplasmatic acidification in neuroblastoma cells in which AMPK expression was downregulated by RNA interference. 22917563 2012
Entrez Id: 10657
Gene Symbol: KHDRBS1
KHDRBS1
0.050 AlteredExpression disease BEFREE 6-OHDA treatment failed to suppress mTOR/S6K phosphorylation and to increase LC3 conversion, p62 degradation and cytoplasmatic acidification in neuroblastoma cells in which AMPK expression was downregulated by RNA interference. 22917563 2012
Entrez Id: 23636
Gene Symbol: NUP62
NUP62
0.040 AlteredExpression disease BEFREE 6-OHDA treatment failed to suppress mTOR/S6K phosphorylation and to increase LC3 conversion, p62 degradation and cytoplasmatic acidification in neuroblastoma cells in which AMPK expression was downregulated by RNA interference. 22917563 2012
Entrez Id: 2965
Gene Symbol: GTF2H1
GTF2H1
0.040 AlteredExpression disease BEFREE 6-OHDA treatment failed to suppress mTOR/S6K phosphorylation and to increase LC3 conversion, p62 degradation and cytoplasmatic acidification in neuroblastoma cells in which AMPK expression was downregulated by RNA interference. 22917563 2012
Entrez Id: 51164
Gene Symbol: DCTN4
DCTN4
0.040 AlteredExpression disease BEFREE 6-OHDA treatment failed to suppress mTOR/S6K phosphorylation and to increase LC3 conversion, p62 degradation and cytoplasmatic acidification in neuroblastoma cells in which AMPK expression was downregulated by RNA interference. 22917563 2012
Entrez Id: 818
Gene Symbol: CAMK2G
CAMK2G
0.010 Biomarker disease BEFREE 8 distinct CaMK-II isozymes were identified from human mammary tumor and neuroblastoma cell cDNA, each of which represented a variant of beta, gamma or delta CaMK-II. 9060999 1997