Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE However, mutations in MECP2 also have been identified in normal carrier female individuals, female individuals with mild learning disabilities and features of Angelman syndrome, and male individuals with Klinefelter syndrome or Rett syndrome-like features, fatal neonatal encephalopathy, and familial X-linked mental retardation with or without motor abnormalities. 16225824 2005
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE Chromosome Xq28 duplications encompassing methyl-CpG-binding protein 2 gene (MECP2) are observed most in males with a severe neurodevelopmental disorder associated with hypotonia, spasticity, severe learning disability, delayed psychomotor development, and recurrent pulmonary infections. 27180140 2016
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE MECP2 mutations have subsequently been identified in patients with a variety of clinical syndromes ranging from mild learning disability in females to severe mental retardation, seizures, ataxia, and sometimes neonatal encephalopathy in males. 11262731 2001
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE Favorable (skewed) X inactivation can so spare a patient from the effects of mutant MECP2 that they display only the mildest learning disability or no phenotype at all. 11180222 2000
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE MECP2 mutations have also been identified in individuals with a variety of clinical syndromes, including mild learning-disability in females, neonatal encephalopathy in males, and psychiatric disorders, autism and X-linked mental retardation in both males and females. 16647848 2006
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE Furthermore, the panorama of phenotypes with MECP2 mutations now extends far beyond RS to include normal girls and women, mild learning disability, autistic spectrum disorders, and X-linked mental retardation. 12616684 2002
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE Semi-dominant X-chromosome linked learning disability with progressive ataxia, spasticity and dystonia associated with the novel MECP2 variant p.V122A: akin to the new MECP2 duplication syndrome? 19592282 2010
Entrez Id: 4763
Gene Symbol: NF1
NF1
0.340 GeneticVariation disease BEFREE Neurofibromatosis type I (NF1) is an autosomal dominant disorder caused by mutations in the NF1 gene, leading to a variety of abnormalities in cell growth and differentiation, and to learning disabilities. 12524206 2003
Entrez Id: 4763
Gene Symbol: NF1
NF1
0.340 Biomarker disease BEFREE The functions of neurofibromin and VCP in spinogenesis were shown to correlate with the learning disability and dementia phenotypes seen in patients with IBMPFD. 22105171 2011
Entrez Id: 4763
Gene Symbol: NF1
NF1
0.340 GeneticVariation disease BEFREE Gross deletions of the neurofibromatosis type 1 (NF1) gene are predominantly of maternal origin and commonly associated with a learning disability, dysmorphic features and developmental delay. 9654211 1998
Entrez Id: 4763
Gene Symbol: NF1
NF1
0.340 GeneticVariation disease BEFREE Mutations in the NF1 gene cause abnormalities in cell growth and differentiation and lead to a variety of learning disabilities. 12403561 2002
Entrez Id: 4137
Gene Symbol: MAPT
MAPT
0.320 Biomarker disease BEFREE Microdeletion encompassing MAPT at chromosome 17q21.3 is associated with developmental delay and learning disability. 16906163 2006
Entrez Id: 4137
Gene Symbol: MAPT
MAPT
0.320 GeneticVariation disease BEFREE The MAPT H1 haplotype has been associated with progressive supranuclear palsy, corticobasal degeneration, Parkinson's disease and Alzheimer's disease, while the H2 is linked to recurrent deletion events associated with the 17q21.31 microdeletion syndrome, a disease characterized by developmental delay and learning disability. 22950410 2012
Entrez Id: 2890
Gene Symbol: GRIA1
GRIA1
0.310 GeneticVariation disease BEFREE Phenotypic follow-up in five individuals with GRIA1 mutations shows evidence of specific learning disabilities and autism. 28628100 2017
Entrez Id: 5663
Gene Symbol: PSEN1
PSEN1
0.310 GeneticVariation disease BEFREE We report a 35 year-old male with childhood learning disability and early onset dementia who is homozygous for the A431E variant in the PSEN1 gene. 30716424 2019
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.040 Biomarker disease BEFREE Array-CGH and high-throughput sequencing have dramatically expanded the number of genes implicated in isolated intellectual disabilities and LDs, highlighting the implication of neuron-specific post-mitotic transcription factors and synaptic proteins as candidate genes. 26486473 2016
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.040 Biomarker disease BEFREE Cost Effectiveness of Using Array-CGH for Diagnosing Learning Disability. 25894741 2015
Entrez Id: 2477
Gene Symbol: FRAXA
FRAXA
0.040 GeneticVariation disease BEFREE We have investigated a population consisted of 276 males with idiopathic mental retardation or learning disability and a control sample of 207 non-affected boys in order to determine if there was a possible phenotype consequence of the expanded unmethylated alleles for FRAXA/FRAXE loci. 12883656 2003
Entrez Id: 2477
Gene Symbol: FRAXA
FRAXA
0.040 GeneticVariation disease BEFREE We report the results of a five year survey of FRAXA and FRAXE mutations among boys aged 5 to 18 with special educational needs (SEN) related to learning disability. 10851251 2000
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.040 Biomarker disease BEFREE Array CGH in patients with learning disability (mental retardation) and congenital anomalies: updated systematic review and meta-analysis of 19 studies and 13,926 subjects. 19367186 2009
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.040 Biomarker disease BEFREE On the basis of these results, we anticipate that array-CGH will become a routine method of genome-wide screening for imbalanced rearrangements in children with learning disability. 15060094 2004
Entrez Id: 2477
Gene Symbol: FRAXA
FRAXA
0.040 Biomarker disease BEFREE To see whether FRAXA or FRAXE can account for the etiology of some unexplained neurodevelopmental disorders in children, we screened for trinucleotide repeat expansion in a consecutive cohort of 73 Chinese children and their mothers seen in 1995 (group 1) referred for developmental assessment due to developmental delay, language delay, attention deficit hyperactivity disorder, autistic spectrum disorder, mental retardation and/or learning disability. 9630071 1998
Entrez Id: 2477
Gene Symbol: FRAXA
FRAXA
0.040 Biomarker disease BEFREE FRAXA and FRAXE: evidence against segregation distortion and for an effect of intermediate alleles on learning disability. 9435259 1998
Entrez Id: 2481
Gene Symbol: FRAXE
FRAXE
0.030 Biomarker disease BEFREE FRAXA and FRAXE: evidence against segregation distortion and for an effect of intermediate alleles on learning disability. 9435259 1998
Entrez Id: 414
Gene Symbol: ARSD
ARSD
0.030 GeneticVariation disease BEFREE Consistent with our results, (i) SCO2 deficiency and/or CCO activity defects have been reported in patients with learning disabilities including autism and (ii) mutated proteins in ASD have been found associated with p53-signaling pathways. 22900024 2012