Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9158
Gene Symbol: FIBP
FIBP
0.100 GeneticVariation disease CLINVAR
Entrez Id: 1175
Gene Symbol: AP2S1
AP2S1
0.010 AlteredExpression disease BEFREE Learning disabilities in these patients, associated with higher serum calcium and magnesium levels may suggest the presence of AP2S1 rather than CaSR mutation and may guide the first step in the genetic evaluation. 28176280 2017
Entrez Id: 846
Gene Symbol: CASR
CASR
0.010 GeneticVariation disease BEFREE Learning disabilities in these patients, associated with higher serum calcium and magnesium levels may suggest the presence of AP2S1 rather than CaSR mutation and may guide the first step in the genetic evaluation. 28176280 2017
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE MECP2 mutations have subsequently been identified in patients with a variety of clinical syndromes ranging from mild learning disability in females to severe mental retardation, seizures, ataxia, and sometimes neonatal encephalopathy in males. 11262731 2001
Entrez Id: 7915
Gene Symbol: ALDH5A1
ALDH5A1
0.010 Biomarker disease BEFREE Succinate-semialdehyde dehydrogenase (SSADH) deficiency is a rare cause of learning disability. 14981524 2004
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.370 GeneticVariation disease BEFREE MECP2 mutations have also been identified in individuals with a variety of clinical syndromes, including mild learning-disability in females, neonatal encephalopathy in males, and psychiatric disorders, autism and X-linked mental retardation in both males and females. 16647848 2006
Entrez Id: 6567
Gene Symbol: SLC16A2
SLC16A2
0.010 Biomarker disease BEFREE SLC16A2 involvement should be considered in males with learning disability, an associated motor or movement disorder, and evidence of delayed myelination on brain MRI. 19811520 2010
Entrez Id: 57497
Gene Symbol: LRFN2
LRFN2
0.020 Biomarker disease BEFREE Lrfn2/SALM1 is a PSD-95-interacting synapse adhesion molecule, and human LRFN2 is associated with learning disabilities. 28604739 2017
Entrez Id: 2477
Gene Symbol: FRAXA
FRAXA
0.040 Biomarker disease BEFREE FRAXA and FRAXE: evidence against segregation distortion and for an effect of intermediate alleles on learning disability. 9435259 1998
Entrez Id: 23096
Gene Symbol: IQSEC2
IQSEC2
0.100 CausalMutation disease CLINVAR A novel splicing mutation in the IQSEC2 gene that modulates the phenotype severity in a family with intellectual disability. 26733290 2016
Entrez Id: 4137
Gene Symbol: MAPT
MAPT
0.320 Biomarker disease CTD_human A proteomic analysis of MCLR-induced neurotoxicity: implications for Alzheimer's disease. 22430071 2012
Entrez Id: 5493
Gene Symbol: PPL
PPL
0.010 GeneticVariation disease BEFREE A recent study using the PPL statistical framework identified a novel region of genetic linkage on chromosome 16q21 that is limited to ASD families with LD. 20972252 2011
Entrez Id: 93986
Gene Symbol: FOXP2
FOXP2
0.010 Biomarker disease BEFREE Although these preliminary findings provide a tentative evidence for the contribution of FOXP2 to ADHD and suggest common genetic factors for this psychiatric disorder and learning disabilities, they should be interpreted with caution. 22504457 2012
Entrez Id: 57497
Gene Symbol: LRFN2
LRFN2
0.020 Biomarker disease BEFREE Altogether, the combined approaches imply a role for LRFN2 in LD, specifically for working memory processes and executive function. 26486473 2016
Entrez Id: 2890
Gene Symbol: GRIA1
GRIA1
0.310 Biomarker disease CTD_human AMPA-receptor GluR1 subunits are involved in the control over behavior by cocaine-paired cues. 16495937 2007
Entrez Id: 347
Gene Symbol: APOD
APOD
0.300 Biomarker disease CTD_human Apolipoprotein D is involved in the mechanisms regulating protection from oxidative stress. 18419796 2008
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.040 Biomarker disease BEFREE Array CGH in patients with learning disability (mental retardation) and congenital anomalies: updated systematic review and meta-analysis of 19 studies and 13,926 subjects. 19367186 2009
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.040 Biomarker disease BEFREE Array-CGH and high-throughput sequencing have dramatically expanded the number of genes implicated in isolated intellectual disabilities and LDs, highlighting the implication of neuron-specific post-mitotic transcription factors and synaptic proteins as candidate genes. 26486473 2016
Entrez Id: 351
Gene Symbol: APP
APP
0.300 Biomarker disease CTD_human Atorvastatin prevents hippocampal cell death, neuroinflammation and oxidative stress following amyloid-β(1-40) administration in mice: evidence for dissociation between cognitive deficits and neuronal damage. 20816828 2010
Entrez Id: 8301
Gene Symbol: PICALM
PICALM
0.010 Biomarker disease BEFREE Autosomal dominant disorder Legius syndrome (NF1- like syndrome) shows phenotype features that overlap with neurofibromatosis type 1 (NF1), such as CALMs, freckling, macrocephaly and learning disability. 28150585 2017
Entrez Id: 805
Gene Symbol: CALM2
CALM2
0.010 Biomarker disease BEFREE Autosomal dominant disorder Legius syndrome (NF1- like syndrome) shows phenotype features that overlap with neurofibromatosis type 1 (NF1), such as CALMs, freckling, macrocephaly and learning disability. 28150585 2017
Entrez Id: 808
Gene Symbol: CALM3
CALM3
0.010 Biomarker disease BEFREE Autosomal dominant disorder Legius syndrome (NF1- like syndrome) shows phenotype features that overlap with neurofibromatosis type 1 (NF1), such as CALMs, freckling, macrocephaly and learning disability. 28150585 2017
Entrez Id: 801
Gene Symbol: CALM1
CALM1
0.010 Biomarker disease BEFREE Autosomal dominant disorder Legius syndrome (NF1- like syndrome) shows phenotype features that overlap with neurofibromatosis type 1 (NF1), such as CALMs, freckling, macrocephaly and learning disability. 28150585 2017
Entrez Id: 9892
Gene Symbol: SNAP91
SNAP91
0.010 Biomarker disease BEFREE Autosomal dominant disorder Legius syndrome (NF1- like syndrome) shows phenotype features that overlap with neurofibromatosis type 1 (NF1), such as CALMs, freckling, macrocephaly and learning disability. 28150585 2017
Entrez Id: 5741
Gene Symbol: PTH
PTH
0.010 GeneticVariation disease BEFREE Because of the timing for onset of symptomatic hypocalcemia, it was presumed that the patient had anticonvulsant-induced hypocalcemia, and he carried that diagnosis for 18 yr. Chromosome 22q11 deletion syndrome was first suspected at age 32 yr, based on the findings of subtle dysmorphic facial features and a history of learning disability in a patient with PTH-deficient hypocalcemia. 15472168 2004