Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.020 Biomarker disease BEFREE A single intracerebroventricular (i.c.v.) injection at post-natal day 1 in Cln6 mutant mice delivered scAAV9.CB.CLN6 directly into the CSF, and it prevented or drastically reduced all of the pathological hallmarks of Batten disease. 31331814 2019
Entrez Id: 728378
Gene Symbol: POTEF
POTEF
0.020 Biomarker disease BEFREE A single intracerebroventricular (i.c.v.) injection at post-natal day 1 in Cln6 mutant mice delivered scAAV9.CB.CLN6 directly into the CSF, and it prevented or drastically reduced all of the pathological hallmarks of Batten disease. 31331814 2019
Entrez Id: 514
Gene Symbol: ATP5F1E
ATP5F1E
0.020 Biomarker disease BEFREE Accumulating autofluorescent lysosomal storage material in CLN3 disease, consisting of dolichols, lipids, biometals, and a protein that normally resides in the mitochondria, subunit c of the mitochondrial ATPase, provides evidence that autophagosomal-lysosomal turnover of cellular components is disrupted upon loss of CLN3 protein function. 31783699 2019
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.020 Biomarker disease BEFREE A promoter-dosage effect was observed in all brain regions examined, in which hCLN3 levels were elevated 3- to 8-fold in Cln3(Δex7/8) mice receiving scAAV9/β-actin-hCLN3 versus scAAV9/MeCP2-hCLN3. 27629717 2016
Entrez Id: 728378
Gene Symbol: POTEF
POTEF
0.020 Biomarker disease BEFREE A promoter-dosage effect was observed in all brain regions examined, in which hCLN3 levels were elevated 3- to 8-fold in Cln3(Δex7/8) mice receiving scAAV9/β-actin-hCLN3 versus scAAV9/MeCP2-hCLN3. 27629717 2016
Entrez Id: 51361
Gene Symbol: HOOK1
HOOK1
0.020 Biomarker disease BEFREE Btn2, a Hook1 ortholog and potential Batten disease-related protein, mediates late endosome-Golgi protein sorting in yeast. 17101785 2007
Entrez Id: 497231
Gene Symbol: CLN9
CLN9
0.020 Biomarker disease BEFREE A new variant of a group of pediatric neurodegenerative diseases known as neuronal ceroid lipofuscinosis (NCL) or Batten disease has been identified.It is termed CLN9-deficient. 16303764 2006
Entrez Id: 51361
Gene Symbol: HOOK1
HOOK1
0.020 Biomarker disease BEFREE Elevation of Hook1 in a disease model of Batten disease does not affect a novel interaction between Ankyrin G and Hook1. 15823567 2005
Entrez Id: 497231
Gene Symbol: CLN9
CLN9
0.020 GeneticVariation disease BEFREE Impaired cell adhesion and apoptosis in a novel CLN9 Batten disease variant. 15349861 2004
Entrez Id: 514
Gene Symbol: ATP5F1E
ATP5F1E
0.020 GeneticVariation disease BEFREE The Saccharomyces cerevisiae gene BTN1, encodes a 408 amino acid putative integral membrane protein, which is 39% identical and 59% similar to the human Cln3p, whose mutant forms are responsible for Batten's disease and for a diminished degradation of mitochondrial ATPase synthase subunit c. Disruption experiments established that Btn1p is not essential for viability, mitochondrial function, or degradation of mitochondrial ATP synthase in yeast. 9219333 1997
Entrez Id: 6817
Gene Symbol: SULT1A1
SULT1A1
0.020 Biomarker disease BEFREE Analysis of Batten disease candidate genes STP and STM. 7668356 1995
Entrez Id: 100526830
Gene Symbol: SLX1A-SULT1A3
SLX1A-SULT1A3
0.020 Biomarker disease BEFREE Analysis of Batten disease candidate genes STP and STM. 7668356 1995
Entrez Id: 6818
Gene Symbol: SULT1A3
SULT1A3
0.020 Biomarker disease BEFREE Analysis of Batten disease candidate genes STP and STM. 7668356 1995
Entrez Id: 445329
Gene Symbol: SULT1A4
SULT1A4
0.020 Biomarker disease BEFREE Analysis of Batten disease candidate genes STP and STM. 7668356 1995
Entrez Id: 6817
Gene Symbol: SULT1A1
SULT1A1
0.020 Biomarker disease BEFREE One gene, STP, has been localised on the YAC contig proximal to D16S298 and is therefore a candidate for CLN3. 7668354 1995
Entrez Id: 9322
Gene Symbol: TRIP10
TRIP10
0.020 Biomarker disease BEFREE Analysis of Batten disease candidate genes STP and STM. 7668356 1995
Entrez Id: 9322
Gene Symbol: TRIP10
TRIP10
0.020 Biomarker disease BEFREE One gene, STP, has been localised on the YAC contig proximal to D16S298 and is therefore a candidate for CLN3. 7668354 1995
Entrez Id: 6818
Gene Symbol: SULT1A3
SULT1A3
0.020 Biomarker disease BEFREE Thus two phenol sulphotransferase genes (STP and STM) have been finely localised to chromosome 16p12.1-p11.2, to the same region as CLN3, the gene for Batten disease. 7999068 1994
Entrez Id: 445329
Gene Symbol: SULT1A4
SULT1A4
0.020 Biomarker disease BEFREE Thus two phenol sulphotransferase genes (STP and STM) have been finely localised to chromosome 16p12.1-p11.2, to the same region as CLN3, the gene for Batten disease. 7999068 1994
Entrez Id: 100526830
Gene Symbol: SLX1A-SULT1A3
SLX1A-SULT1A3
0.020 Biomarker disease BEFREE Thus two phenol sulphotransferase genes (STP and STM) have been finely localised to chromosome 16p12.1-p11.2, to the same region as CLN3, the gene for Batten disease. 7999068 1994
Entrez Id: 3240
Gene Symbol: HP
HP
0.020 GeneticVariation disease BEFREE The gene for Batten disease (CLN3) has been mapped to human chromosome 16 by demonstration of linkage to the haptoglobin locus, and its localization has been further refined using a panel of DNA markers. 1746562 1991
Entrez Id: 3240
Gene Symbol: HP
HP
0.020 GeneticVariation disease BEFREE In a material of 26 Caucasian families, 23 with at least 2 children affected with Batten disease, we found a lod score of 3.00 at theta = 0.00 in males and theta = 0.26 in females with haptoglobin (HP), and assign the locus for Batten disease to 16q22. 2805379 1989
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.030 GeneticVariation disease BEFREE We have found that in the most common juvenile form of NCL (CLN3 disease or JNCL) this glial response is less pronounced in both mouse models and human autopsy material, with the morphological transformation of both astrocytes and microglia severely attenuated or delayed. 29041969 2017
Entrez Id: 2078
Gene Symbol: ERG
ERG
0.030 Biomarker disease BEFREE Three unrelated children aged from 5.6 to 8.8 years, and with molecularly confirmed CLN3, underwent a comprehensive ophthalmological examination including visual acuity, fundus photography, fundus autofluorescence (FAF), electrophysiology (multifocal ERG), Goldmann visual fields, and SD-OCT. 27486012 2017
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.030 Biomarker disease BEFREE CLN3 disease (Spielmeyer-Vogt-Sjogren-Batten disease, previously known as classic juvenile neuronal ceroid lipofuscinosis, NCL) is a pediatric-onset progressive neurodegenerative disease characterized by progressive vision loss, seizures, loss of cognitive and motor function, and early death. 27766444 2017