Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7534
Gene Symbol: YWHAZ
YWHAZ
0.010 AlteredExpression disease BEFREE Rapamycin-insensitive up-regulation of adipocyte phospholipase A2 in tuberous sclerosis and lymphangioleiomyomatosis. 25347447 2014
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 Biomarker disease BEFREE Over the past five years, there have been remarkable advances in the diagnosis and therapy of LAM, including the identification of vascular endothelial growth factor D (VEGF-D) as a diagnostic biomarker and the US Food and Drug Administration approval of sirolimus as therapy for LAM. 29171770 2018
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 Biomarker disease CTD_human Mammalian target of rapamycin regulates murine and human cell differentiation through STAT3/p63/Jagged/Notch cascade. 20038814 2010
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 AlteredExpression disease BEFREE Our findings suggest that the tissue expression levels of VEGF-D and MMP-9 are important parameters associated with the loss of pulmonary function and could be considered as potential severity markers in open lung biopsies of LAM patients. 29739412 2018
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 Biomarker disease BEFREE Serum vascular endothelial growth factor-D as a diagnostic and therapeutic biomarker for lymphangioleiomyomatosis. 30818375 2019
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 Biomarker disease BEFREE Serum vascular endothelial growth factor-D (VEGF-D) is a lymphangiogenic growth factor that is considered a valuable tool in the diagnosis of lymphangioleiomyomatosis (LAM). 30623243 2019
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 Biomarker disease BEFREE Long-Term Effect of Sirolimus on Serum Vascular Endothelial Growth Factor D Levels in Patients With Lymphangioleiomyomatosis. 28533049 2018
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 Biomarker disease BEFREE Future trials in patients with LAM who have lymphatic manifestations or elevated serum VEGF-D will likely focus on the VEGF-C/VEGF-D/VEGFR-3 axis. 25420303 2014
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 Biomarker disease BEFREE However, there are gaps in knowledge regarding VEGF-D dysregulation and its cellular origin in lymphangioleiomyomatosis. 28202529 2017
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 AlteredExpression disease LHGDN Only VEGF-D was significantly increased in LAM patients as compared with age- and gender-matched healthy volunteers (n=24) (LAM vs. control, geometric mean 95% CI; 1069.3 pg/mL (809.4 approximately 1412.6) vs. 295.9 pg/mL (262.6 approximately 333.5), p<0.0001). 17034294 2006
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 AlteredExpression disease BEFREE By injecting TSC2-null cells into nude mice, we have developed a mouse model of LAM that is characterized by multiple random TSC2-null lung lesions, vascular endothelial growth factor-D expression, lymphangiogenesis, destruction of lung parenchyma, and decreased survival, similar to human LAM. 23035046 2012
Entrez Id: 7424
Gene Symbol: VEGFC
VEGFC
0.010 AlteredExpression disease BEFREE LAM lesions express lymphangiogenic growth factors VEGF-C and VEGF-D; growth factor receptors, VEGFR-2 and VEGFR-3; and markers LYVE-1 and podoplanin, and are laced with chaotic lymphatic channels. 25420303 2014
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.020 Biomarker disease BEFREE As the pathogenesis of LAM is being further recognized, other therapeutic agents such as matrix metalloproteinase inhibitors, statins, interferon, VEGF inhibitors, chloroquine analogs and cyclin-dependent kinase inhibitors, along with sirolimus or a combination of several of these agents, may offer the best hope for effective therapy. 22788941 2012
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.020 Biomarker disease BEFREE Concentration of Serum Vascular Endothelial Growth Factor (VEGF-D) and Its Correlation with Functional and Clinical Parameters in Patients with Lymphangioleiomyomatosis from a Brazilian Reference Center. 30623243 2019
Entrez Id: 84959
Gene Symbol: UBASH3B
UBASH3B
0.010 PosttranslationalModification disease BEFREE Tuberin regulates p70 S6 kinase activation and ribosomal protein S6 phosphorylation. A role for the TSC2 tumor suppressor gene in pulmonary lymphangioleiomyomatosis (LAM). 12045200 2002
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE No consistent metabolic model currently exists for LAM, therefore wild-type mouse embryonic fibroblasts (MEF +/+) and TSC2 knockout cells (MEF -/-) were used in this study as a model for LAM. 28577037 2017
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 GeneticVariation disease BEFREE In previous work we found loss of heterozygosity (LOH) of the wild-type TSC2 allele in the abnormal pulmonary smooth muscle cells and renal angiomyolipoma cells from patients with sporadic pulmonary lymphangiomyomatosis (LAM). 11704609 2001
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 AlteredExpression disease BEFREE These data demonstrate that tuberin negatively regulates the activity of S6 and p70S6K specifically, and suggest a potential mechanism for abnormal cell growth in LAM. 12045200 2002
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE Such LAM showed positive immunoreactivity for HMB-45 (a monoclonal antibody specific for human melanoma) and tuberin (the gene product of TSC2). 11406664 2001
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE Isolated pulmonary LAM cells have been difficult to maintain in culture, and most studies of LAM lung cells involve mixtures of TSC2 wild-type and TSC2-null cells. 29406787 2018
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 GeneticVariation disease BEFREE Recent studies, however, revealed that both forms of LAM are genetically related but that sporadic LAM is a distinct clinical entity caused by somatic mutations of TSC2 (not TSC1) rather than a forme fruste of TSC carrying either of the TSC1 or TSC2 germline mutations. 15257730 2004
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease GENOMICS_ENGLAND Genome sequencing identifies major causes of severe intellectual disability. 24896178 2014
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 AlteredExpression disease BEFREE The origin of LAM cells remains unknown; however, inactivation of Tsc2 gene in the mouse uterus resulted in myometrial tumors exhibiting LAM features, and approximately 50% of animals developed metastatic myometrial lung tumors. 26880751 2016
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 GeneticVariation disease BEFREE Using a LAM patient-derived cell line (bearing biallelic Tuberin inactivation), we demonstrate that E2 stimulates a robust and biphasic activation of ERK2 and transcription of the late response-gene Fra1 associated with epithelial-to-mesenchymal transition. 23983265 2013
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE Proliferation of LAM/TSC cells is epidermal growth factor (EGF)-dependent and blockade of EGF receptor causes cell death as we previously showed in cells lacking tuberin. 24606538 2014