Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 GeneticVariation disease BEFREE Between 23 and 64% of malignant pleural mesothelioma have somatic inactivating mutations in the BAP1 gene. 28756516 2017
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 Biomarker disease BEFREE The miRNAs were also assayed by western blot analysis for their ability to down-regulate endogenous mesothelin in the MPM Mero-14 cell line. 25436799 2014
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 GeneticVariation disease BEFREE Although the pooled results demonstrated that BAP1 mutation was a negative indicator of overall survival (hazard ratio = 1.73; 95% confidence interval = 1.23-2.42) and disease-free survival (hazard ratio = 2.25; 95% confidence interval = 1.47-3.45), this prognostic value was only applicable to uveal melanoma and clear cell renal cell carcinoma, but not to malignant pleural mesothelioma or cholangiocarcinoma. 28618948 2017
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 AlteredExpression disease BEFREE The aim of our work was to evaluate the clinical significance and prognostic implications of BAP1, mesothelin and PD-L1 expression in 117 patients with a diagnosis of MPM who were diagnosed in our institution between 2002 and 2017. 30145072 2018
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE Malignant pleural mesothelioma (MPM) is an aggressive asbestos-related tumor where wild-type p53 might be present. 26358421 2016
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 AlteredExpression disease BEFREE BAP1 expression was a favorable predicative factor for OS in clear cell renal cell carcinoma (HR = 0.57, 95% CI: 0.47-0.69), non-small cell lung cancer (HR = 0.55, 95% CI: 0.32-0.96), and uveal melanoma (HR = 0.41, 95% CI: 0.27-0.62), while high expression of BAP1 was associated with poorer outcome in malignant pleural mesothelioma (HR = 2.03, 95% CI: 1.67-2.47). 29266978 2018
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 AlteredExpression disease BEFREE TME and PD-L1 expression were assessed in 93 and 65 chemonaive MPM samples, respectively. 29514216 2018
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 AlteredExpression disease BEFREE The aim of our work was to evaluate the clinical significance and prognostic implications of BAP1, mesothelin and PD-L1 expression in 117 patients with a diagnosis of MPM who were diagnosed in our institution between 2002 and 2017. 30145072 2018
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 Biomarker disease BEFREE Diagnostic value of soluble mesothelin-related peptides in pleural effusion for malignant pleural mesothelioma: An updated meta-analysis. 30946324 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 AlteredExpression disease BEFREE Downregulation of P14/ARF expression seems to contribute to MDM2-overexpression-mediated P53 inactivation in MPM patients. 25668009 2015
Entrez Id: 4233
Gene Symbol: MET
MET
0.100 AlteredExpression disease BEFREE These data confirm the frequent expression of MET in malignant pleural mesothelioma and demonstrate that this can be targeted effectively and safely using a CAR T-cell immunotherapeutic strategy. 29209570 2017
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 Biomarker disease BEFREE Identification of BRCA1-associated protein 1 (BAP1) and cyclin-dependent kinase inhibitor 2A (CDKN2A) gene mutations in MPM have led to the development of new ancillary tests that can streamline the diagnostic pathway. 31169558 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE A positive p16 homozygous deletion supports the diagnosis of MPM. 27219841 2016
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 Biomarker disease BEFREE It has been reported that cellular-mesenchymal to epithelial transition factor (MET) and epidermal growth factor receptor (EGFR) were critical for MPM cell proliferation. 28337371 2017
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 GeneticVariation disease BEFREE Specifically, single-nucleotide variants of BAP1 were observed in 21% of cases, with lower mutation rates observed in sarcomatoid MPM (P < 0.001). 26554828 2016
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 GeneticVariation disease BEFREE Mutations of the BAP1 gene are potential markers of MPM susceptibility. 25979846 2015
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 AlteredExpression disease BEFREE We examined IHC expression of EZH2, BAP1, and MTAP, and 9p21 FISH in MPM (n = 38) and RMH (n = 29) and analyzed the sensitivity and specificity of each detection assay for distinguishing MPM from RMH. 30885343 2019
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 Biomarker disease BEFREE Sensitivity to epidermal growth factor receptor tyrosine kinase inhibitor requires E-cadherin in esophageal cancer and malignant pleural mesothelioma. 23749888 2013
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 Biomarker disease BEFREE Serum mesothelin showed moderate sensitivity and high specificity to differentiate malignant pleural mesothelioma from metastatic malignancy to pleura and from benign pleural diseases. 28335760 2017
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 Biomarker disease BEFREE Negative nuclear staining for BAP1 occurred in 62% of MPMs (including 27% with a cytoplasmic pattern) and was significantly associated with the presence of BAP1 mutation, epithelioid subtype, and a better prognosis. 27422796 2016
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 Biomarker disease BEFREE This review will provide an update of recent progress in serum biomarkers (osteopontin (OPN), soluble mesothelin (SM), and megakaryocyte potentiating factor (MPF)) to diagnose, detect, and monitor MPM. 22870590 2012
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 Biomarker disease BEFREE Five MPM cell lines were used to test the effects of TKIs targeting EGFR (gefitinib, afatinib and lapatinib) on cell proliferation and the expression of the HER family receptor. 26503698 2015
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 Biomarker disease BEFREE A series of 123 formalin-fixed, paraffin-embedded tissue samples with clinical annotations were retrospectively tested with a commercial library kit (Ion AmpliSeq Cancer Hotspot Panel v.2, Life Technologies, Grand Island, NY) to investigate 50 genes plus other two, BRCA1-associated protein-1 (BAP-1) and neurofibromatosis-2 (NF2), frequently altered in MPM. 25514803 2015
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 Biomarker disease BEFREE Whereas recent epidemiological data demonstrated that the incidence of MPM-related death continued to increase in United States between 2009 and 2015, new insight into the molecular pathogenesis and the immunological tumor microenvironment of MPM, for example, regarding the role of BRCA1 associated protein 1 and the expression programmed death receptor ligand 1, are highlighting new potential therapeutic strategies. 29524617 2018
Entrez Id: 4233
Gene Symbol: MET
MET
0.100 Biomarker disease BEFREE <i>ALK</i> overexpression was not associated with gene rearrangement, amplification or kinase-domain mutation. mTOR protein was detected in 28.7% MPM, co-expressed with ALK or MET in 5% and 15% MPM, respectively. 29755689 2018