Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3479
Gene Symbol: IGF1
IGF1
0.020 Biomarker disease BEFREE We measured IGF-I ligand-dependent activation of signaling pathways downstream of the type I IGF receptor in a subset of malignant pleural mesothelioma cell lines and determined the corresponding biological consequences. 15492273 2004
Entrez Id: 5443
Gene Symbol: POMC
POMC
0.010 Biomarker disease BEFREE Autocrine inhibitory influences of alpha-melanocyte-stimulating hormone in malignant pleural mesothelioma. 14576363 2004
Entrez Id: 6424
Gene Symbol: SFRP4
SFRP4
0.010 PosttranslationalModification disease BEFREE Methylation-specific PCR (MSP) analysis showed that SFRP1, SFRP4, and SFRP5 gene promoters are frequently methylated in MM primary tissue (>80%). 15221014 2004
Entrez Id: 6425
Gene Symbol: SFRP5
SFRP5
0.010 PosttranslationalModification disease BEFREE Methylation-specific PCR (MSP) analysis showed that SFRP1, SFRP4, and SFRP5 gene promoters are frequently methylated in MM primary tissue (>80%). 15221014 2004
Entrez Id: 6768
Gene Symbol: ST14
ST14
0.010 AlteredExpression disease BEFREE Notably, matriptase messenger RNA was found to be overexpressed by 826-fold in E MPM, with protein expression subsequently confirmed by immunoblot analysis. 15136399 2004
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.010 GeneticVariation disease BEFREE Mutation analysis of the BRAF codon 599 in malignant pleural mesothelioma by enriched PCR-RFLP. 14719068 2004
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE Genetic alterations in the tumour suppressor genes, P16/CDKN2A and neurofibromatosis 2 (NF2), are found both in human MPM and in asbestos-exposed Nf2-deficient mice. 15691231 2005
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 AlteredExpression disease BEFREE Epidermal growth factor receptor expression of malignant pleural mesothelioma cells and primary normal cells was quantitated by means of flow cytometry. 15867774 2005
Entrez Id: 4233
Gene Symbol: MET
MET
0.100 Biomarker disease BEFREE To investigate a potential therapeutic role for the Met receptor in MPM, we examined the effects of PHA-665752, a specific small-molecule inhibitor of the Met receptor tyrosine kinase, in a panel of 10 MPM cell lines. 16299245 2005
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.040 AlteredExpression disease BEFREE These results suggest that apoptotic defects in pleural MMs are linked to increased levels of Survivin, whereas variations in Bcl-2 and Bax expression appear less significant, although further studies are needed to highlight Bcl-2 family members interactions in apoptosis control. 15829320 2005
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.040 Biomarker disease BEFREE There was a type-specific up-regulation of semaphorin E, ITGB4 and P-cadherin in epithelioid MM, matrix metalloproteinase 9 (MMP9) and tissue-type plasminogen activator (tPA) in sarcomatoid MM and neural cell adhesion molecule L1 (L1CAM) and INP10 in biphasic MM. 15447976 2005
Entrez Id: 3082
Gene Symbol: HGF
HGF
0.040 Biomarker disease BEFREE HGF stimulation has been shown to enhance MPM cell proliferation, migration, cell scattering, and invasiveness. 16299245 2005
Entrez Id: 11186
Gene Symbol: RASSF1
RASSF1
0.030 Biomarker disease BEFREE SV40 infection stimulates production of growth factors elsewhere implicated in autocrine growth of mesothelioma cells and inactivates RASSF1, a gene silenced in MPM. 15691231 2005
Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
0.020 Biomarker disease BEFREE The presence of synergisms between genotypes, i.e., mEH and NAT2 (LRT for heterogeneity p<0.023), mEH and GSTM1 (LRT p<0.061), and NAT2 and GSTM1 (LRT p<0.049), combined with the interaction observed with exposure to asbestos, suggests the presence of gene-environment and gene-gene interactions in the development of MM, although the size of the study group does not allow to draw clearcut conclusions. 15993904 2005
Entrez Id: 10
Gene Symbol: NAT2
NAT2
0.020 Biomarker disease BEFREE The presence of synergisms between genotypes, i.e., mEH and NAT2 (LRT for heterogeneity p<0.023), mEH and GSTM1 (LRT p<0.061), and NAT2 and GSTM1 (LRT p<0.049), combined with the interaction observed with exposure to asbestos, suggests the presence of gene-environment and gene-gene interactions in the development of MM, although the size of the study group does not allow to draw clearcut conclusions. 15993904 2005
Entrez Id: 10512
Gene Symbol: SEMA3C
SEMA3C
0.010 AlteredExpression disease BEFREE There was a type-specific up-regulation of semaphorin E, ITGB4 and P-cadherin in epithelioid MM, matrix metalloproteinase 9 (MMP9) and tissue-type plasminogen activator (tPA) in sarcomatoid MM and neural cell adhesion molecule L1 (L1CAM) and INP10 in biphasic MM. 15447976 2005
Entrez Id: 7472
Gene Symbol: WNT2
WNT2
0.010 AlteredExpression disease BEFREE We confirmed Wnt2 overexpression at the mRNA and protein level in MPM cell lines and tissues. 15900580 2005
Entrez Id: 3897
Gene Symbol: L1CAM
L1CAM
0.010 AlteredExpression disease BEFREE INP10 expression was increased in MM in general compared with normal mesothelium, while increased expression of P-cadherin, L1CAM and ITGB4 was more specific in MMs exhibiting an epithelioid growth pattern. 15447976 2005
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.010 AlteredExpression disease BEFREE Genes encoding two adhesion molecules [COL1A2 and integrin beta4 (ITGB4)] and a chemokine (INP10) were up-regulated in MM compared with both the cell lines and pleural mesothelium. 15447976 2005
Entrez Id: 1543
Gene Symbol: CYP1A1
CYP1A1
0.010 GeneticVariation disease BEFREE The role of mEH, GSTM1, GSTT1, NAT2, and CYP1A1 genotypes in modulating susceptibility to MM was examined in a case-control study of 80 subjects with a confirmed diagnosis of MM and 255 controls. 15993904 2005
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.010 AlteredExpression disease BEFREE INP10 expression was increased in MM in general compared with normal mesothelium, while increased expression of P-cadherin, L1CAM and ITGB4 was more specific in MMs exhibiting an epithelioid growth pattern. 15447976 2005
Entrez Id: 5327
Gene Symbol: PLAT
PLAT
0.010 Biomarker disease BEFREE Immunohistochemistry on TMA containing 47 MM (26 epithelioid, 15 sarcomatoid and six biphasic) was performed for five proteins, ITGB4, P-cadherin, tPA, INP10 and L1CAM. 15447976 2005
Entrez Id: 3930
Gene Symbol: LBR
LBR
0.010 Biomarker disease BEFREE PHA-665752 also reduced MPM in vitro cell migration and invasion. 16299245 2005
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 AlteredExpression disease BEFREE This study documents EGFR overexpression in MPM at the protein and the transcriptional levels; it proposes a reliable method for EGFR expression evaluation in MPM. 16384623 2006
Entrez Id: 4233
Gene Symbol: MET
MET
0.100 Biomarker disease BEFREE c-Met receptor tyrosine kinase (RTK) has not been extensively studied in malignant pleural mesothelioma (MPM). 16397249 2006