Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE Analysis of the PKT206 model of the p53 network was validated by microarrays from the Mero-14 MPM cell line and RNA-seq data from 71 MPM patients, whilst statistical analysis was used to identify the deregulated pathways and predict therapeutic schemes by linking the affected pathway with the patients' clinical state. 30316293 2018
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 Biomarker disease BEFREE BAP1 and <i>p16</i> showed a specificity of 100% in discerning malignant from benign lesions because they are exclusively unexpressed or deleted in MPM. 29507804 2018
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 GeneticVariation disease BEFREE Between 23 and 64% of malignant pleural mesothelioma have somatic inactivating mutations in the BAP1 gene. 28756516 2017
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 GeneticVariation disease BEFREE Although the pooled results demonstrated that BAP1 mutation was a negative indicator of overall survival (hazard ratio = 1.73; 95% confidence interval = 1.23-2.42) and disease-free survival (hazard ratio = 2.25; 95% confidence interval = 1.47-3.45), this prognostic value was only applicable to uveal melanoma and clear cell renal cell carcinoma, but not to malignant pleural mesothelioma or cholangiocarcinoma. 28618948 2017
Entrez Id: 4233
Gene Symbol: MET
MET
0.100 AlteredExpression disease BEFREE These data confirm the frequent expression of MET in malignant pleural mesothelioma and demonstrate that this can be targeted effectively and safely using a CAR T-cell immunotherapeutic strategy. 29209570 2017
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 Biomarker disease BEFREE It has been reported that cellular-mesenchymal to epithelial transition factor (MET) and epidermal growth factor receptor (EGFR) were critical for MPM cell proliferation. 28337371 2017
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 Biomarker disease BEFREE Serum mesothelin showed moderate sensitivity and high specificity to differentiate malignant pleural mesothelioma from metastatic malignancy to pleura and from benign pleural diseases. 28335760 2017
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 Biomarker disease BEFREE More than two-thirds of MPM cases had ≥50% distribution of MSLN-positive cells and, among the remaining third, half had ≥50% distribution of WT1-positive cells. 29100432 2017
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 Biomarker disease BEFREE Serum mesothelin, osteopontin and vimentin: useful markers for clinical monitoring of malignant pleural mesothelioma. 27646775 2017
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 Biomarker disease BEFREE TargomiRs are minicells (EnGeneIC Dream Vectors) loaded with miR-16-based mimic microRNA (miRNA) and targeted to EGFR that are designed to counteract the loss of the miR-15 and miR-16 family miRNAs, which is associated with unsuppressed tumour growth in preclinical models of malignant pleural mesothelioma. 28870611 2017
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 Biomarker disease BEFREE As expected, BAP1 IHC in combination with CDKN2A FISH resulted in high sensitivity (84%) and specificity (100%) for MPM, and p16 loss was an independent predictor of poor survival (hazard ratio, 2.2553; P = .0135). 27771374 2017
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 AlteredExpression disease BEFREE To the best of our knowledge, we are the first to report TIM-3 and LAG-3 expression and we confirm PD-1 and PD-L1 expression on different MPM effusion-resident immune cells. 29163783 2017
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 Biomarker disease BEFREE Trametinib plus 4-Methylumbelliferone Exhibits Antitumor Effects by ERK Blockade and CD44 Downregulation and Affects PD-1 and PD-L1 in Malignant Pleural Mesothelioma. 27867002 2017
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.100 GeneticVariation disease BEFREE BAP1 mutations are present in 47-67% of the MPM tumors, making this a good target for treatment. 28342657 2017
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 AlteredExpression disease BEFREE Furthermore, high soluble mesothelin level may lead to a poor prognosis for malignant pleural mesothelioma patients. 28507279 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE Apoptosis by [Pt(O,O'-acac)(γ-acac)(DMS)] requires PKC-δ mediated p53 activation in malignant pleural mesothelioma. 28704484 2017
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 Biomarker disease BEFREE Previously treated patients with PD-L1-positive malignant pleural mesothelioma were enrolled from 13 centres in six countries. 28291584 2017
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 AlteredExpression disease BEFREE Here, the miR-CATCH technique was applied to the mesothelin (MSLN) gene and coupled with next generation sequencing (NGS), to identify miRNAs that regulate MSLN mRNA and that may be responsible for its increased protein levels found in malignant pleural mesothelioma (MPM). 28125734 2017
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE The most frequently inactivated tumor suppressor gene in MPM is CDKN2A/ARF, encoding for the cell cycle inhibitors p16<sup>INK4a</sup> and p14<sup>ARF</sup>, deleted in about 70% of MPM cases. 28704762 2017
Entrez Id: 4233
Gene Symbol: MET
MET
0.100 AlteredExpression disease BEFREE DCLK1 is correlated with MET and ERK5 expression, and associated with prognosis in malignant pleural mesothelioma. 28560410 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE Our results suggest that the combined targeting of MDM2 and TRAIL might provide a novel therapeutic option for treatment of MPM patients, particularly in the case of sarcomatoid MPM with MDM2 overexpression and functional inactivation of wild-type p53. 28562336 2017
Entrez Id: 10232
Gene Symbol: MSLN
MSLN
0.100 Biomarker disease BEFREE Comprehensive immunohistochemical study of mesothelin (MSLN) using different monoclonal antibodies 5B2 and MN-1 in 1562 tumors with evaluation of its prognostic value in malignant pleural mesothelioma. 28460459 2017
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 AlteredExpression disease BEFREE In malignant pleural mesothelioma (MPM), PD-L1 expression is associated with the nonepithelioid histological subtype and poor prognosis, but the pathways involved in control of PD-L1 expression in MPM are poorly understood. 28629895 2017
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE Thus, we sought to develop a IHC-based method that could predict the deletion of p16 in MPM in concordance with 9p21 FISH. 28213009 2017
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE As expected, BAP1 IHC in combination with CDKN2A FISH resulted in high sensitivity (84%) and specificity (100%) for MPM, and p16 loss was an independent predictor of poor survival (hazard ratio, 2.2553; P = .0135). 27771374 2017