Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 613
Gene Symbol: BCR
BCR
0.400 Biomarker disease BEFREE A diagnosis of BCR-ABL1 (p190)-positive and ETV6-RUNX1-positive B-ALL was made, and treatment was initiated according to the AIEOP-BFM-ALL2000 protocol. 23491079 2013
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.400 GeneticVariation disease BEFREE These findings contribute to the knowledge of CDKN2A/2B and CRLF2 alterations and their prognostic value in B-ALL. 31228652 2019
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.400 Biomarker disease BEFREE Poor prognosis BCR-ABL and MLL-AF4 was detected in two-thirds of pediatric B-ALL and is likely to be the reason for the already reported poor survival of childhood ALL in South-East Asia. 26266519 2015
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.400 Biomarker disease BEFREE Together, our data suggest that IGF2BP3-mediated targeting of oncogenic transcripts may represent a critical pathogenetic mechanism in MLL-rearranged B-ALL and support IGF2BP3 and its cognate RNA-binding partners as potential therapeutic targets in this disease. 26974154 2016
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 GeneticVariation disease BEFREE We selected a group of 16 patients with acute lymphoblastic leukemia (ALL) and Burkitt's lymphoma (BL) in order to investigate the presence of p53 mutations. 9407719 1998
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE We identified the chromatin-modifying protein CHD8 as necessary for cell survival in a mouse model of BCR-Abl+ B-cell acute lymphoblastic leukemia. 26588464 2015
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.400 Biomarker disease BEFREE Our anecdotal experience suggests that children with B-ALL and RUNX1 amplification might be predisposed to thrombosis. 26907657 2016
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.400 Biomarker disease BEFREE These cells correspond to TEL/AML1(pos) ALL (1/4 pediatric B-precursor ALL). 18005092 2008
Entrez Id: 5079
Gene Symbol: PAX5
PAX5
0.400 GeneticVariation disease BEFREE In vitro, bone marrow cells from young mice formed unique mixed pro-B lymphoid (B220(+)CD19(+)CD43(+)sIgM(-), PAX5(+), TdT(+), IgH rearranged)/myeloid (CD11b/Mac1(+), c-fms(+), lysozyme(+)) colonies when grown in IL-7- and Flt3 ligand-containing media. 16551973 2006
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.400 GeneticVariation disease BEFREE Surface antigen phenotype can predict TEL-AML1 rearrangement in childhood B-precursor ALL: a Pediatric Oncology Group study. 9823952 1998
Entrez Id: 5087
Gene Symbol: PBX1
PBX1
0.400 AlteredExpression disease BEFREE The prognostic role of E2A-PBX1 expression detected by real-time quantitative reverse transcriptase polymerase chain reaction (RQ-PCR) in B cell acute lymphoblastic leukemia after allogeneic hematopoietic stem cell transplantation. 29705861 2018
Entrez Id: 2120
Gene Symbol: ETV6
ETV6
0.400 GeneticVariation disease BEFREE Of 166 unselected cases of B-precursor ALL studied by Southern hybridization, 45 cases (27%) showed TEL rearrangement. 9823952 1998
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.400 Biomarker disease BEFREE Further investigation into the clinical and biological significance of elevated MN1 expression in TEL-AML1(positive) leukemia might provide insight into additional molecular mechanisms contributing to B-ALL and may lead to improved treatment options for patients. 26111797 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 Biomarker disease BEFREE Preleukemic Tp53-/-Lnk-/- pro-B progenitors were hypersensitive to IL-7, exhibited marked self-renewal in vitro and in vivo, and were able to initiate B-ALL in transplant recipients. 26974155 2016
Entrez Id: 2120
Gene Symbol: ETV6
ETV6
0.400 Biomarker disease BEFREE Regulated Pax5-Etv6 target genes identified in these B-ALLs encode proteins implicated in pre-B-cell receptor (BCR) signaling and migration/adhesion, which could contribute to the proliferation, survival, and tissue infiltration of leukemic B cells. 28219927 2017
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 AlteredExpression disease BEFREE We compared the activity of the ATP-competitive pan-PI3K inhibitor NVP-BKM120, the allosteric mTORC1 inhibitor RAD001, the ATP-competitive dual PI3K/mTORC1/C2 inhibitors NVP-BEZ235 and NVP-BGT226 and the combined mTORC1 and mTORC2 inhibitors Torin 1, PP242 and KU-0063794 using long-term cultures of ALL cells (ALL-LTC) from patients with B-precursor ALL that expressed the BCR-ABL or TEL-ABL oncoproteins or were BCR-ABL negative. 24244612 2013
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.400 Biomarker disease BEFREE A fluorescence in situ hybridization study of TEL-AML1 fusion gene in B-cell acute lymphoblastic leukemia (1984-2001). 12850377 2003
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.400 AlteredExpression disease BEFREE This is the first spontaneous mouse model of pre-B leukemia to demonstrate inappropriate expression of non-B-cell-specific genes associated with loss of Ebf1, Tcf3 and Runx1 expression. 28692033 2017
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.400 GeneticVariation disease BEFREE These results demonstrate that CDK4I gene deletions are very frequent and probably early events in childhood acute leukaemias of lymphoid origin and especially in early-T and pre-B ALLs. 8555068 1995
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.400 Biomarker disease BEFREE However, this group was not representative as it included a high number of relapsed patients compared with the normal incidence in B-precursor ALL [54 in continuous complete remission (CCR) and 36 relapsed patients] and only a slightly better prognosis for TEL/AML1-positive patients was found (not significant) (four relapses in 17 TEL/AML1-positive patients vs. 32 relapses in 73 TEL/AML1-negative patients). 11167743 2000
Entrez Id: 5087
Gene Symbol: PBX1
PBX1
0.400 GeneticVariation disease BEFREE Flow cytometric predictive scoring systems for common fusions ETV6/RUNX1, BCR/ABL1, TCF3/PBX1 and rearrangements of the KMT2A gene, proposed for the initial cytogenetic approach in cases of B-acute lymphoblastic leukemia. 30730614 2019
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.400 Biomarker disease BEFREE Despite the small cohort size, it could be postulated that B lineage ALL with MLL abnormalities and mature phenotype is a distinct entity that differs both from the typical Pro B ALL observed in infants and mature B-ALL with high MYC expression. 26857438 2016
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE The BCR-ABL1 fusion kinase is frequently associated with chronic myeloid leukemia and B-cell acute lymphoblastic leukemia but is rare in T-cell acute lymphoblastic leukemia (T-ALL). 15713800 2005
Entrez Id: 2120
Gene Symbol: ETV6
ETV6
0.400 Biomarker disease BEFREE The degree of anemia was significantly different for three distinct groups of patients compared to the remaining patients (mean hemoglobin; T-cell leukemia: 106 g/L versus 76 g/L (precursor B-cell acute lymphoblastic leukemia); within precursor B-cell ALL: TEL-AML1 positive: 68 g/L versus 79 g/L; BCR-ABL positive: 93 g/L versus 76 g/L; each p<0.05). 18815194 2008
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE We review the literature where only 2 similar cases with normal karyotype Pre-B ALL and associated FISH BCR/ABL1 numerical abnormalities were found. 23098889 2013