Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 181
Gene Symbol: AGRP
AGRP
0.010 Biomarker disease BEFREE Current guidelines on the management of women with SCH and/or thyroid autoimmunity undergoing ART cycles will be presented in this review. 31532314 2019
Entrez Id: 65125
Gene Symbol: WNK1
WNK1
0.010 AlteredExpression disease BEFREE Moreover, mRNA and protein expression analyses confirmed increased expression of TLR2, TLR3, TLR4, and NF-κB p65 in brain tissue, and decreased IL-27 and IκBα expression following SCH treatment, as compared to the untreated-BTBR and CGS-treated BTBR mice. 28668513 2017
Entrez Id: 246778
Gene Symbol: IL27
IL27
0.010 AlteredExpression disease BEFREE Moreover, mRNA and protein expression analyses confirmed increased expression of TLR2, TLR3, TLR4, and NF-κB p65 in brain tissue, and decreased IL-27 and IκBα expression following SCH treatment, as compared to the untreated-BTBR and CGS-treated BTBR mice. 28668513 2017
Entrez Id: 56005
Gene Symbol: MYDGF
MYDGF
0.010 AlteredExpression disease BEFREE Moreover, mRNA and protein expression analyses confirmed increased expression of TLR2, TLR3, TLR4, and NF-κB p65 in brain tissue, and decreased IL-27 and IκBα expression following SCH treatment, as compared to the untreated-BTBR and CGS-treated BTBR mice. 28668513 2017
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.010 AlteredExpression disease BEFREE In addition, CGS significantly decreased the IL-17A, RORγt, Stat3, and pStat3 levels and increased the Foxp3 and IL-10 mRNA and protein expression levels as compared with the BTBR control and SCH treatments. 28438638 2017
Entrez Id: 5447
Gene Symbol: POR
POR
0.010 Biomarker disease BEFREE Pro-inflammatory biomarkers: Expression of COX-1 was statistically higher in SCH and BD than HC (P<0.0001; P<0.0001); NFκB and PGE2 were statistically higher in SCH compared with BD (P=0.001; P<0.0001) and HC (P=0.003; P<0.0001); NLRP3 was higher in BD than HC (P=0.005); and CPR showed a gradient among the three groups. 29102659 2018
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.010 AlteredExpression disease BEFREE SC or SCH significantly inhibited the levels of IL-6, tumor necrosis factor (TNF)-[Formula: see text], and IL-1[Formula: see text] in spleen of the OVA-sensitized mice. 28081628 2017
Entrez Id: 8991
Gene Symbol: SELENBP1
SELENBP1
0.010 Biomarker disease BEFREE Interestingly, SBP (OR = 1.050; 95%CI 1.034-1.066; P = 0.000), DR (OR = 5.248; 95%CI 2.816-9.777; P = 0.000), SCH (OR = 2.256; 95%CI 1.184-4.299; P = 0.013), and TC (OR = 1.389; 95%CI 1.108-1.742; P = 0.004) were found to be independent risk factors for macroalbuminuria. 27412074 2017
Entrez Id: 4131
Gene Symbol: MAP1B
MAP1B
0.010 AlteredExpression disease BEFREE Immunocytochemical data further indicates that SCH-treated neurons showed upregulation of Hnrnpa2b1 and Map1b, validating their proteomic profiles. 31831796 2019
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.010 AlteredExpression disease BEFREE In addition, CGS significantly decreased the IL-17A, RORγt, Stat3, and pStat3 levels and increased the Foxp3 and IL-10 mRNA and protein expression levels as compared with the BTBR control and SCH treatments. 28438638 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 AlteredExpression disease BEFREE The Pups in the SCH and OH groups showed longer escape latencies in the MWM and decreased field-excitatory post synaptic potentials in LTP tests compared with those in the CON group. p75<sup>NTR</sup>, p-JNK, p53 and Bax expression levels in the cerebral cortex increased in pups in the SCH and OH groups compared with those in the CON group. 29669804 2018
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.010 AlteredExpression disease BEFREE Our results showed that the levels of IL-2<sup>+</sup>, IL-6<sup>+</sup>, IL-9<sup>+</sup>, IFN-γ<sup>+</sup>, and TNF-α<sup>+</sup> were significantly lower, whereas the levels of TGF-β<sup>+</sup> in the spleen and in splenic CD4<sup>+</sup> T cells were significantly higher in the CGS-treated mice than in the BTBR control and SCH-treated mice. 28465254 2017
Entrez Id: 6469
Gene Symbol: SHH
SHH
0.010 GeneticVariation disease BEFREE We therefore considered holoprosencephaly (HPE)-associated genes as potential SCH candidates and report for the first time heterozygous mutations in SIX3 and SHH in a total of three unrelated patients and one fetus with SCH; one of them without obvious associated malformations of midline forebrain structures. 20157829 2010
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.010 Biomarker disease BEFREE Pro-inflammatory biomarkers: Expression of COX-1 was statistically higher in SCH and BD than HC (P<0.0001; P<0.0001); NFκB and PGE2 were statistically higher in SCH compared with BD (P=0.001; P<0.0001) and HC (P=0.003; P<0.0001); NLRP3 was higher in BD than HC (P=0.005); and CPR showed a gradient among the three groups. 29102659 2018
Entrez Id: 7538
Gene Symbol: ZFP36
ZFP36
0.010 Biomarker disease BEFREE ZFP36-FOSB Fusion in a Hemorrhagic Epithelioid and Spindle Cell Hemangioma of Bone: Is there a family of FOSB-rearranged vascular neoplasms of the bone? 31553804 2020
Entrez Id: 3181
Gene Symbol: HNRNPA2B1
HNRNPA2B1
0.010 AlteredExpression disease BEFREE Immunocytochemical data further indicates that SCH-treated neurons showed upregulation of Hnrnpa2b1 and Map1b, validating their proteomic profiles. 31831796 2019
Entrez Id: 406938
Gene Symbol: MIR146A
MIR146A
0.010 AlteredExpression disease BEFREE According to multivariate logistic regression analyses, miR-146a levels were associated with the incidence of CHD in patients with SCH. 29357324 2018
Entrez Id: 8622
Gene Symbol: PDE8B
PDE8B
0.010 GeneticVariation disease BEFREE There were no significant differences of genotype frequencies between patients and controls at any of the analyzed SNPs (p > 0.05).The haplotypes ''A G C G'' (p = 0.002; OR, 1.533; 95% CI, 1.172-2.006) and "G A A G" (p = 0.014; OR, 0.576; 95% CI, 0.369-0.899) in PDE8B were observed to be significantly associated with SCH in pregnant women. 25822812 2015
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.010 Biomarker disease BEFREE This study suggests a specific immune-inflammatory biomarker pattern for established SCH (NFκB, PGE2, iNOS, and COX-2) that differentiates it from BD and HC. 29102659 2018
Entrez Id: 2018
Gene Symbol: EMX2
EMX2
0.010 GeneticVariation disease BEFREE We conclude that the reported association between SCH and EMX2 mutations is not adequately supported by current data, and that diagnostic testing of EMX2 is not justified, as any results would be uninterpretable. 18409201 2008
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.010 AlteredExpression disease BEFREE SC or SCH significantly inhibited the levels of IL-6, tumor necrosis factor (TNF)-[Formula: see text], and IL-1[Formula: see text] in spleen of the OVA-sensitized mice. 28081628 2017
Entrez Id: 5742
Gene Symbol: PTGS1
PTGS1
0.010 Biomarker disease BEFREE Pro-inflammatory biomarkers: Expression of COX-1 was statistically higher in SCH and BD than HC (P<0.0001; P<0.0001); NFκB and PGE2 were statistically higher in SCH compared with BD (P=0.001; P<0.0001) and HC (P=0.003; P<0.0001); NLRP3 was higher in BD than HC (P=0.005); and CPR showed a gradient among the three groups. 29102659 2018
Entrez Id: 7494
Gene Symbol: XBP1
XBP1
0.010 Biomarker disease BEFREE Hepatic ERp29 and Bip, as well as IRE1α and XBP-1s, were induced significantly in SCH mice, suggesting the induction of endoplasmic reticulum (ER) stress, particularly involving the IRE1α/XBP-1s pathway. 31156553 2019
Entrez Id: 5564
Gene Symbol: PRKAB1
PRKAB1
0.010 AlteredExpression disease BEFREE We also found that the SCH mice had decreased phospho-HMGCR and phospho-AMPK expression, while the expression of AMPK showed no change. 28386276 2017
Entrez Id: 64689
Gene Symbol: GORASP1
GORASP1
0.010 AlteredExpression disease BEFREE Moreover, mRNA and protein expression analyses confirmed increased expression of TLR2, TLR3, TLR4, and NF-κB p65 in brain tissue, and decreased IL-27 and IκBα expression following SCH treatment, as compared to the untreated-BTBR and CGS-treated BTBR mice. 28668513 2017