Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 238
Gene Symbol: ALK
ALK
0.010 Biomarker disease BEFREE Many oncologists reported having no patients with CRC who had mismatch repair and/or microsatellite instability (24%) or germline Lynch syndrome (32%) testing, and no patients with NSCLC who had ALK testing (11%). 28095174 2017
Entrez Id: 220296
Gene Symbol: HEPACAM
HEPACAM
0.010 Biomarker disease BEFREE In addition to frequently altered MMR genes, such as MLH1, MSH2, MSH6, and MLH3, other MMR-associated genes, such as those encoding human exonuclease 1, transforming growth factor β receptor 2, and alanine aminopeptidase, metastasis-associated protein 2, adenomatosis polyposis coli down-regulated 1, and hepatic and glial cell adhesion molecule have also been implicated in Chinese Lynch syndrome. 26078562 2015
Entrez Id: 27020
Gene Symbol: NPTN
NPTN
0.010 Biomarker disease BEFREE Most GPs (55/63; 87.3%) were not confident to discuss the details of LS with patients and relatives. 25652327 2015
Entrez Id: 4316
Gene Symbol: MMP7
MMP7
0.010 AlteredExpression disease BEFREE The expression of MMP-7 had a negative correlation with that of TIMP-2 in Lynch syndrome and sporadic CRC. 24415879 2014
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.010 Biomarker disease BEFREE Therefore, the colorectal cancer of Lynch syndrome can escape the inhibitory effect of TGFβ1. 24415879 2014
Entrez Id: 7077
Gene Symbol: TIMP2
TIMP2
0.010 Biomarker disease BEFREE The expression of MMP-7 had a negative correlation with that of TIMP-2 in Lynch syndrome and sporadic CRC. 24415879 2014
Entrez Id: 11199
Gene Symbol: ANXA10
ANXA10
0.010 AlteredExpression disease BEFREE As these polyps give rise to the majority of sporadic microsatellite-unstable tumors, we evaluated the ability of annexin A10 expression to discriminate between LS and sporadic tumors. 24625416 2014
Entrez Id: 8651
Gene Symbol: SOCS1
SOCS1
0.010 AlteredExpression disease BEFREE In mice fed with WD, proximal colon mucosa, the predominant site of cancer formation in LS, exhibited a significant expression decrease in tumor suppressor genes, Dkk1, Hoxd1, Slc5a8, and Socs1, the latter two only in the Mlh1(+/-) mice. 24204690 2013
Entrez Id: 11231
Gene Symbol: SEC63
SEC63
0.010 Biomarker disease BEFREE Hepatocellular carcinoma as extracolonic manifestation of Lynch syndrome indicates SEC63 as potential target gene in hepatocarcinogenesis. 23537056 2013
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.010 GeneticVariation disease BEFREE HER2 overexpression (3+) was observed in 2 out of 62 patients, overexpression of p53 in 26 out of 62, abnormal expression of β-catenin in 12 out of 61, KRAS mutation in 21 out of 49, BRAF V600E mutation in 1 out of 40 patients, MMR deficiency (dMMR) in 14 out of 61 and was consistent with Lynch syndrome in 9 out of 14 patients. 24196786 2013
Entrez Id: 4149
Gene Symbol: MAX
MAX
0.010 Biomarker disease BEFREE The present results suggest that neither rare nor common genetic variants in ESR1, ESR2, MAX, PCNA, or KAT2A contribute to the development of Lynch syndrome. 22086303 2012
Entrez Id: 5111
Gene Symbol: PCNA
PCNA
0.010 Biomarker disease BEFREE The present results suggest that neither rare nor common genetic variants in ESR1, ESR2, MAX, PCNA, or KAT2A contribute to the development of Lynch syndrome. 22086303 2012
Entrez Id: 2648
Gene Symbol: KAT2A
KAT2A
0.010 Biomarker disease BEFREE The present results suggest that neither rare nor common genetic variants in ESR1, ESR2, MAX, PCNA, or KAT2A contribute to the development of Lynch syndrome. 22086303 2012
Entrez Id: 5793
Gene Symbol: PTPRG
PTPRG
0.010 PosttranslationalModification disease BEFREE Tumour-specific methylation of PTPRG intron 1 locus in sporadic and Lynch syndrome colorectal cancer. 21150880 2011
Entrez Id: 574033
Gene Symbol: MIR18B
MIR18B
0.010 GeneticVariation disease BEFREE In particular, hypermethylation at miR-148a and miR-152 was associated with microsatellite-unstable (as opposed to stable) tumors and hypermethylation at miR-18b with sporadic disease (as opposed to Lynch syndrome). 21327300 2011
Entrez Id: 406940
Gene Symbol: MIR148A
MIR148A
0.010 GeneticVariation disease BEFREE In particular, hypermethylation at miR-148a and miR-152 was associated with microsatellite-unstable (as opposed to stable) tumors and hypermethylation at miR-18b with sporadic disease (as opposed to Lynch syndrome). 21327300 2011
Entrez Id: 406943
Gene Symbol: MIR152
MIR152
0.010 Biomarker disease BEFREE In particular, hypermethylation at miR-148a and miR-152 was associated with microsatellite-unstable (as opposed to stable) tumors and hypermethylation at miR-18b with sporadic disease (as opposed to Lynch syndrome). 21327300 2011
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.010 GeneticVariation disease BEFREE We found mutation of the VHL gene in 2 of 8 tumors from group A, in 4 of 12 tumors from group B, and no mutation in the control group C. We conclude that this rare subset of renal neoplasms is not part of the spectrum of tumors seen in LS. 21602665 2011
Entrez Id: 6935
Gene Symbol: ZEB1
ZEB1
0.010 AlteredExpression disease BEFREE However, ZEB1 is not expressed in the epithelium of hereditary forms of CRCs that carry wild-type APC and where β-catenin is excluded from the nucleus (Lynch syndrome). 22080605 2011
Entrez Id: 9209
Gene Symbol: LRRFIP2
LRRFIP2
0.010 GeneticVariation disease BEFREE A novel exonic rearrangement affecting MLH1 and the contiguous LRRFIP2 is a founder mutation in Portuguese Lynch syndrome families. 21785361 2011
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.010 Biomarker disease BEFREE Though HNPCC-associated colorectal cancers show simple genetic profiles with few chromosomal alterations, we demonstrate frequent and repeated targeting of the PI3K/AKT/mTOR pathway, which suggests that therapeutic strategies directed at this pathway are likely to be beneficial also in HNPCC. 19731079 2010
Entrez Id: 407008
Gene Symbol: MIR223
MIR223
0.010 AlteredExpression disease BEFREE Relative expression of miR-92, -223, -155, -196a, -31, and -26b were significantly different among MSI subgroups, and miR-31 and miR-223 were overexpressed in CRC of patients with hereditary non-polyposis colorectal cancer syndrome (Lynch syndrome). 20413677 2010
Entrez Id: 5291
Gene Symbol: PIK3CB
PIK3CB
0.010 AlteredExpression disease BEFREE Though HNPCC-associated colorectal cancers show simple genetic profiles with few chromosomal alterations, we demonstrate frequent and repeated targeting of the PI3K/AKT/mTOR pathway, which suggests that therapeutic strategies directed at this pathway are likely to be beneficial also in HNPCC. 19731079 2010
Entrez Id: 92
Gene Symbol: ACVR2A
ACVR2A
0.010 Biomarker disease BEFREE 5-ASA increases replication fidelity in mononucleotide, dinucleotide, and tetranucleotide repeats and reduces mutations in tumor suppressor genes TGFBR2 and ACVR2, a finding that may provoke in vivo studies for the prevention of colorectal cancer in hereditary nonpolyposis colorectal cancer. 20197483 2010
Entrez Id: 407035
Gene Symbol: MIR31
MIR31
0.010 AlteredExpression disease BEFREE Relative expression of miR-92, -223, -155, -196a, -31, and -26b were significantly different among MSI subgroups, and miR-31 and miR-223 were overexpressed in CRC of patients with hereditary non-polyposis colorectal cancer syndrome (Lynch syndrome). 20413677 2010