Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.030 AlteredExpression group BEFREE Pooled hazard ratios indicated that the association of PD-L1 expression with overall survival in bone sarcoma (osteosarcoma and chondrosarcoma) patients was statistically significant (1.987, 95% CI: 1.224-3.224, <i>p</i> = 0.005), as was its association with event-free survival in bone and soft-tissue sarcoma patients (3.868, 95% CI: 2.298-6.511, <i>p</i> = 0.000). 28938660 2017
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.030 Biomarker group BEFREE Construction of Anti-hPD-L1 HCAb Nb6 and <i>in Situ</i><sup>124</sup>I Labeling for Noninvasive Detection of PD-L1 Expression in Human Bone Sarcoma. 31535847 2019
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.030 Biomarker group BEFREE Here, we review the recent advances of anti-PD-1/PD-L1 and anti-CTLA-4 blockade as well as other promising new immune checkpoint targets for their use in bone sarcoma therapy. 30775238 2019
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.020 GeneticVariation group BEFREE The objective of our study was to conduct a meta-analysis investigating the associations between CTLA-4 gene polymorphisms and risk of bone sarcomas. 25230787 2015
Entrez Id: 3111
Gene Symbol: HLA-DOA
HLA-DOA
0.020 GeneticVariation group BEFREE Associations between the cytotoxic T lymphocyte antigen 4 polymorphisms and risk of bone sarcomas. 25230787 2015
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.020 GeneticVariation group BEFREE We studied seven clinicopathologically defined malignant giant cell tumors, as well as two H3F3A-mutant bone sarcomas without giant cell tumor histology using a combination of clinicopathological, immunohistochemical, and molecular methods (Sanger sequencing + pyrosequencing or next generation sequencing). 31285528 2019
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.020 Biomarker group BEFREE Moreover, recurrent mutations in histone chromatin remodelling genes, including H3F3A, ATRX and DOT1L, were identified in five of 14 samples (36%), highlighting the potential role of deregulated chromatin remodelling pathways in UPSb tumourigenesis. 30281149 2019
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.020 Biomarker group BEFREE Moreover, recurrent mutations in histone chromatin remodelling genes, including H3F3A, ATRX and DOT1L, were identified in five of 14 samples (36%), highlighting the potential role of deregulated chromatin remodelling pathways in UPSb tumourigenesis. 30281149 2019
Entrez Id: 3111
Gene Symbol: HLA-DOA
HLA-DOA
0.020 GeneticVariation group BEFREE Comprehensive evaluation of the cytotoxic T-lymphocyte antigen-4 gene polymorphisms in risk of bone sarcoma. 25000484 2014
Entrez Id: 85417
Gene Symbol: CCNB3
CCNB3
0.020 Biomarker group BEFREE BCOR-CCNB3 sarcoma is typically a primary bone sarcoma affecting male adolescents, and this is the first report of it presenting in a kidney of a young child as a CCSK. 28833375 2018
Entrez Id: 85417
Gene Symbol: CCNB3
CCNB3
0.020 GeneticVariation group BEFREE BCOR-CCNB3 fusion transcripts resulting from an X-chromosomal paracentric inversion were recently identified in a series of unclassifiable soft tissue and bone sarcomas with Ewing sarcoma-like morphology. 24805859 2014
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.020 GeneticVariation group BEFREE We studied seven clinicopathologically defined malignant giant cell tumors, as well as two H3F3A-mutant bone sarcomas without giant cell tumor histology using a combination of clinicopathological, immunohistochemical, and molecular methods (Sanger sequencing + pyrosequencing or next generation sequencing). 31285528 2019
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.020 Biomarker group BEFREE Here, we review the recent advances of anti-PD-1/PD-L1 and anti-CTLA-4 blockade as well as other promising new immune checkpoint targets for their use in bone sarcoma therapy. 30775238 2019
Entrez Id: 213
Gene Symbol: ALB
ALB
0.010 Biomarker group BEFREE We retrospectively identified 275 patients aged 18 and older who underwent surgery for primary bone sarcomas who also had albumin values recorded within 4 weeks before surgery. 30554419 2019
Entrez Id: 4316
Gene Symbol: MMP7
MMP7
0.010 AlteredExpression group BEFREE Differential expression of matrilysin in osteosarcoma is the first reported detection of metalloproteinase activity in human skeletal sarcoma. 7472745 1995
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.010 AlteredExpression group BEFREE These bone sarcoma cells as well as tissue specimens express activated STAT3 and the marker genes of pluripotent embryonic stem (ES) cells, Oct 3/4 and Nanog. 16331882 2005
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 GeneticVariation group BEFREE The analysis of 475 tumors in 91 families with p53 germline mutations reported since 1990 shows that breast carcinomas are most frequent (24.0%), followed by bone sarcomas (12.6%), brain tumors (12.0%), and soft tissue sarcomas (11.6%). 9006316 1997
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.010 GeneticVariation group BEFREE Use of c-KIT/PDGFRA mutational analysis to predict the clinical response to imatinib in patients with advanced gastrointestinal stromal tumours entered on phase I and II studies of the EORTC Soft Tissue and Bone Sarcoma Group. 15010069 2004
Entrez Id: 84444
Gene Symbol: DOT1L
DOT1L
0.010 Biomarker group BEFREE Moreover, recurrent mutations in histone chromatin remodelling genes, including H3F3A, ATRX and DOT1L, were identified in five of 14 samples (36%), highlighting the potential role of deregulated chromatin remodelling pathways in UPSb tumourigenesis. 30281149 2019
Entrez Id: 27086
Gene Symbol: FOXP1
FOXP1
0.010 Biomarker group BEFREE Notably, 35% of individuals with DMS develop MFH, a highly malignant bone sarcoma. 10053015 1999
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.010 GeneticVariation group BEFREE Use of c-KIT/PDGFRA mutational analysis to predict the clinical response to imatinib in patients with advanced gastrointestinal stromal tumours entered on phase I and II studies of the EORTC Soft Tissue and Bone Sarcoma Group. 15010069 2004
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.010 Biomarker group BEFREE The role of FDG PET/CT in patients treated with neoadjuvant chemotherapy for localized bone sarcomas. 27645694 2017
Entrez Id: 4233
Gene Symbol: MET
MET
0.010 AlteredExpression group BEFREE We have previously found that bone sarcomas express high levels of Met/HGF receptor while in some cases the ligand HGF is co-expressed with the receptor, activating an autocrine loop. 10867643 2000
Entrez Id: 8743
Gene Symbol: TNFSF10
TNFSF10
0.010 Biomarker group BEFREE However, the few clinical trials in the literature show only low or moderate efficacy of TRAIL in treating bone sarcoma. 28888998 2017
Entrez Id: 2264
Gene Symbol: FGFR4
FGFR4
0.010 Biomarker group BEFREE FGFR4 SNP was found to be correlated significantly with overall and metastasis-free survival in patients with soft tissue sarcomas (P = 0.029 and P = 0.045, respectively), but not in those patients with bone sarcomas (P = 0.88 and P = 0.75, respectively). 14601095 2003