Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3239
Gene Symbol: HOXD13
HOXD13
0.510 Biomarker disease GENOMICS_ENGLAND Here, we report on, for the first time, a female patient with VACTERL association with a 21 base-pair deletion in the exon 1 triplet repeats of HOXD13, a sonic hedgehog (SHH) downstream target. 19006232 2008
Entrez Id: 3239
Gene Symbol: HOXD13
HOXD13
0.510 GeneticVariation disease ORPHANET Here, we report on, for the first time, a female patient with VACTERL association with a 21 base-pair deletion in the exon 1 triplet repeats of HOXD13, a sonic hedgehog (SHH) downstream target. 19006232 2008
Entrez Id: 3239
Gene Symbol: HOXD13
HOXD13
0.510 GeneticVariation disease BEFREE Here, we report on, for the first time, a female patient with VACTERL association with a 21 base-pair deletion in the exon 1 triplet repeats of HOXD13, a sonic hedgehog (SHH) downstream target. 19006232 2008
Entrez Id: 3239
Gene Symbol: HOXD13
HOXD13
0.510 Biomarker disease GENOMICS_ENGLAND
Entrez Id: 10131
Gene Symbol: TRAP1
TRAP1
0.020 GeneticVariation disease BEFREE Thus, we identified mutations in TRAP1 as highly likely causing CAKUT or VACTERL association with CAKUT. 24152966 2014
Entrez Id: 10131
Gene Symbol: TRAP1
TRAP1
0.020 GeneticVariation disease BEFREE Understanding the complex genetic makeup underlying congenital anomalies of the kidney and urinary tract (CAKUT) is of primary importance to improve diagnosis, stratify risk for later-onset complications, and develop therapeutic strategies.Saisawat et al. used homozygosity mapping coupled with next-generation sequencing to identify recessive mutations in TRAP1 in families with isolated CAKUT and with VACTERL association. 24875543 2014
Entrez Id: 2294
Gene Symbol: FOXF1
FOXF1
0.020 Biomarker disease BEFREE Analysis of FOXF1 and the FOX gene cluster in patients with VACTERL association. 21315191 2011
Entrez Id: 2294
Gene Symbol: FOXF1
FOXF1
0.020 Biomarker disease BEFREE Genetic factors in esophageal atresia, tracheo-esophageal fistula and the VACTERL association: roles for FOXF1 and the 16q24.1 FOX transcription factor gene cluster, and review of the literature. 19822228 2010
Entrez Id: 6469
Gene Symbol: SHH
SHH
0.010 Biomarker disease BEFREE In fact, BPY2 interacts with a ubiquitin-protein ligase, involved in the SHH pathway which is known to be implicated in the genesis of VACTERL association. 31315107 2019
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.010 Biomarker disease BEFREE We report a boy with VACTERL association and shawl scrotum with bifid scrotum who presented with a de novo Yq11.223q11.23 microdeletion identified by array CGH. 31315107 2019
Entrez Id: 3093
Gene Symbol: UBE2K
UBE2K
0.010 Biomarker disease BEFREE In fact, BPY2 interacts with a ubiquitin-protein ligase, involved in the SHH pathway which is known to be implicated in the genesis of VACTERL association. 31315107 2019
Entrez Id: 9083
Gene Symbol: BPY2
BPY2
0.010 Biomarker disease BEFREE In fact, BPY2 interacts with a ubiquitin-protein ligase, involved in the SHH pathway which is known to be implicated in the genesis of VACTERL association. 31315107 2019
Entrez Id: 5125
Gene Symbol: PCSK5
PCSK5
0.010 Biomarker disease BEFREE Loss of proprotein convertase subtilisin/kexin type 5 (Pcsk5) results in multiple developmental anomalies including cardiac malformations, caudal regression, pre-sacral mass, renal agenesis, anteroposterior patterning defects, and tracheo-oesophageal and anorectal malformations, and is a model for VACTERL/caudal regression/Currarino syndromes (VACTERL association - Vertebral anomalies, Anal atresia, Cardiac defects, Tracheoesophageal fistula and/or Esophageal atresia, Renal & Radial anomalies and Limb defects). 28446132 2017
Entrez Id: 55215
Gene Symbol: FANCI
FANCI
0.010 GeneticVariation disease BEFREE This suggests that the VACTERL association in patients with FA may be seen in patients with FANCI mutations more often than previously recognized. 26590883 2016
Entrez Id: 55120
Gene Symbol: FANCL
FANCL
0.010 GeneticVariation disease BEFREE Loss-of-Function FANCL Mutations Associate with Severe Fanconi Anemia Overlapping the VACTERL Association. 25754594 2015
Entrez Id: 26574
Gene Symbol: AATF
AATF
0.010 Biomarker disease BEFREE We propose to consider a role for selected genes such as AATF (cell proliferation and apoptosis) and TADA2L (Wnt pathway) at the 17q12 region as well as developmental and transcriptional pathways represented by these genes, in the development of OA/TOF and VATER association. 24239950 2014
Entrez Id: 6871
Gene Symbol: TADA2A
TADA2A
0.010 Biomarker disease BEFREE We propose to consider a role for selected genes such as AATF (cell proliferation and apoptosis) and TADA2L (Wnt pathway) at the 17q12 region as well as developmental and transcriptional pathways represented by these genes, in the development of OA/TOF and VATER association. 24239950 2014
Entrez Id: 2187
Gene Symbol: FANCB
FANCB
0.010 GeneticVariation disease BEFREE A male newborn with VACTERL association and Fanconi anemia with a FANCB deletion detected by array comparative genomic hybridization (aCGH). 22052692 2011
Entrez Id: 7547
Gene Symbol: ZIC3
ZIC3
0.010 Biomarker disease BEFREE It is hypothesized that this novel and de novo polyalanine expansion in ZIC3 contributes to the VACTERL association in this patient. 20452998 2010
Entrez Id: 2255
Gene Symbol: FGF10
FGF10
0.010 GeneticVariation disease BEFREE A total of 20 patients (ten with ARM and VACTERL association, respectively, and ten with CE) were analysed for genomic mutations in the coding regions and exon-intron boundaries of FGF10. 18587586 2008