Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6935
Gene Symbol: ZEB1
ZEB1
0.010 AlteredExpression disease BEFREE This is the first study that relates concurrent expression of Tubβ3, ZEB1, and β-catenin to abnormal epithelial and myofibroblast differentiation in idiopathic pulmonary fibrosis, providing indirect but robust evidence of miR-200 deregulation and epithelial to mesenchymal transition activation in idiopathic pulmonary fibrosis. 27586205 2017
Entrez Id: 10413
Gene Symbol: YAP1
YAP1
0.020 Biomarker disease BEFREE These results highlight a role for miR-15a/YAP1/Twist axis in IPF that offer novel strategies for the prevention and treatment of lung fibrosis. 30644438 2019
Entrez Id: 10413
Gene Symbol: YAP1
YAP1
0.020 Biomarker disease BEFREE YAP and mTOR/p-S6 signaling pathways interact to induce cell proliferation and migration, and inhibit epithelial cell differentiation that may contribute to the pathogenesis of IPF. 29563341 2018
Entrez Id: 7515
Gene Symbol: XRCC1
XRCC1
0.010 Biomarker disease BEFREE Our results showed that IPF fibroblasts residing in a collagen rich matrix are resistance to cisplatin-induced cell death due to the aberrantly high CK2/XRCC1-dependent DNA repair activity. 30850922 2019
Entrez Id: 9213
Gene Symbol: XPR1
XPR1
0.010 Biomarker disease BEFREE The role of microRNA-155/liver X receptor pathway in experimental and idiopathic pulmonary fibrosis. 27746237 2017
Entrez Id: 7504
Gene Symbol: XK
XK
0.010 Biomarker disease BEFREE Forty-one IPF patients were included: 11 treated with MMF, 20 treated with ineffective/harmful agents (such as prednisone, azathioprine, and/or NAC), and 10 did not receive any specific treatment for their IPF. 28441449 2017
Entrez Id: 331
Gene Symbol: XIAP
XIAP
0.020 AlteredExpression disease BEFREE Our data demonstrate a novel mechanism of metabolic regulation in which glutaminolysis promotes apoptosis resistance of IPF fibroblasts through epigenetic regulation of XIAP and survivin. 30130138 2019
Entrez Id: 331
Gene Symbol: XIAP
XIAP
0.020 AlteredExpression disease BEFREE To address these hypotheses, we examined XIAP expression in normal and IPF fibroblasts at baseline and in normal fibroblasts after treatment with TGF-β1 or ET-1. 23492187 2013
Entrez Id: 7494
Gene Symbol: XBP1
XBP1
0.010 Biomarker disease BEFREE Using fluorescent immunohistochemistry, we profiled autophagy (LC3βII) and UPR (BIP and XBP1) markers in human non-IPF and IPF lung tissue. 29074489 2018
Entrez Id: 25937
Gene Symbol: WWTR1
WWTR1
0.010 Biomarker disease BEFREE In this study, we explored the roles of TAZ in the pathogenesis of idiopathic pulmonary fibrosis (IPF) through histological analyses of human lung tissues and cell culture experiments. 28195168 2017
Entrez Id: 7477
Gene Symbol: WNT7B
WNT7B
0.010 Biomarker disease BEFREE The results demonstrate a wide distribution of Wnt5A expression in cells of the IPF lung and reveal that it is significantly increased by Wnt7B and TGF-β1, which, in combination, could represent key signaling pathways that modulate the pathogenesis of IPF. 26538547 2016
Entrez Id: 7474
Gene Symbol: WNT5A
WNT5A
0.330 Biomarker disease CTD_human MicroRNA-101 attenuates pulmonary fibrosis by inhibiting fibroblast proliferation and activation. 28726637 2017
Entrez Id: 7474
Gene Symbol: WNT5A
WNT5A
0.330 Biomarker disease BEFREE The non-canonical Wnt signaling representative ligand Wnt5a was recently found to involve in idiopathic pulmonary fibrosis (IPF) and pathogenesis of RA. 31072629 2019
Entrez Id: 7474
Gene Symbol: WNT5A
WNT5A
0.330 Biomarker disease BEFREE Collectively, our data suggest that WNT5A may play a role in fibroblast expansion and survival characteristics of idiopathic pulmonary fibrosis and other fibrotic interstitial lung diseases that exhibit UIP histological patterns. 19251946 2009
Entrez Id: 7474
Gene Symbol: WNT5A
WNT5A
0.330 AlteredExpression disease BEFREE The results demonstrate a wide distribution of Wnt5A expression in cells of the IPF lung and reveal that it is significantly increased by Wnt7B and TGF-β1, which, in combination, could represent key signaling pathways that modulate the pathogenesis of IPF. 26538547 2016
Entrez Id: 7471
Gene Symbol: WNT1
WNT1
0.030 AlteredExpression disease BEFREE Wnt1, 7b and 10b, Fzd2 and 3, beta-catenin, and Lef1 expression was significantly increased in IPF. 18478089 2008
Entrez Id: 7471
Gene Symbol: WNT1
WNT1
0.030 Biomarker disease BEFREE Interestingly, RSPO2 participates in the canonical Wingless/int1 pathway, a critical route in the pathogenesis of IPF. 29345973 2018
Entrez Id: 7471
Gene Symbol: WNT1
WNT1
0.030 AlteredExpression disease BEFREE Further analysis revealed that expression of WNT1-inducible signaling protein-1 (WISP1), which is encoded by a WNT target gene, was increased in ATII cells in both a mouse model of pulmonary fibrosis and patients with IPF. 19287097 2009
Entrez Id: 65125
Gene Symbol: WNK1
WNK1
0.010 Biomarker disease BEFREE Furthermore, higher phosphorylation of AKT and NF-κB p65 in IPF patient samples and murine samples was verified by immunohistochemistry while SAC could decrease the phosphorylation level of AKT and NF-κB p65 in mice stimulated with BLM. 30928090 2019
Entrez Id: 7450
Gene Symbol: VWF
VWF
0.010 AlteredExpression disease BEFREE Among the proteins with the greatest difference in levels in patients with IPF versus controls were the glycoproteins thrombospondin 1 and von Willebrand factor and immune-related proteins C-C motif chemokine ligand 17 and bactericidal permeability-increasing protein. 31640794 2019
Entrez Id: 738
Gene Symbol: VPS51
VPS51
0.010 AlteredExpression disease BEFREE A significant co-expression was detected between Ang-2 and Tie-2 in protein level (p=0.007) in IPF group. 21042788 2010
Entrez Id: 7432
Gene Symbol: VIP
VIP
0.010 AlteredExpression disease BEFREE Both NFAT and VIP mRNA levels were measured in lungs from IPF and COPD patients. 28125639 2017
Entrez Id: 7431
Gene Symbol: VIM
VIM
0.050 Biomarker disease BEFREE Immunohistochemical analysis revealed that COMP was expressed in dense fibrotic regions of IPF lungs and co-localized with vimentin and around pSMAD3 expressing cells. 24376648 2013
Entrez Id: 7431
Gene Symbol: VIM
VIM
0.050 AlteredExpression disease BEFREE Human alveolar epithelial cells (A549), and fibroblasts derived from an IPF patient (LL29), or fibroblasts from healthy normal lung tissue (MRC-5), were treated with TGF-β, and levels of expression of AQP1, as well as those of E-cadherin, vimentin, α-SMA and collagen were analyzed by RT-qPCR, western blot and immunohistochemistry. 29774214 2018
Entrez Id: 7431
Gene Symbol: VIM
VIM
0.050 Biomarker disease BEFREE These data show that anti-vimentin autoreactivity is prevalent in IPF patients and is strongly associated with disease manifestations. 28754682 2017