Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3131
Gene Symbol: HLF
HLF
0.010 Biomarker disease BEFREE Supernatants (SN) from cultured IPF-HLF and N-HLF were added to N-HLF, and their effect on cell phenotype was tested. 30810067 2019
Entrez Id: 100126351
Gene Symbol: MIR939
MIR939
0.010 Biomarker disease BEFREE In addition, five potential altered microRNA-mRNA interactions were found, including hsa-miR-939-5p-<i>PLXNA4</i>, hsa-miR-3918-<i>CTIF</i>, hsa-miR-4768-5p-<i>PDE5A</i>, hsa-miR-1273g-3p-<i>VPS53</i>, and hsa-miR-1972-<i>PCSK9.</i> In summary, differentially expressed genes and microRNAs in response to EGCG treatment in IPF fibroblasts were identified in the current study. 31013581 2019
Entrez Id: 590
Gene Symbol: BCHE
BCHE
0.010 GeneticVariation disease BEFREE The two disease modules displayed strong disease signals in an independent gene expression data set of COPD and IPF lung tissue and showed statistically significant overlap and network proximity, sharing 19 genes, including ARHGAP12 and BCHE. 30997486 2019
Entrez Id: 940
Gene Symbol: CD28
CD28
0.010 AlteredExpression disease BEFREE Transcriptomic analysis of CD3<sup>+</sup> T cells isolated from IPF lung explants revealed a loss of CD28-transcript expression and elevation of pro-inflammatory cytokine expression in IPF relative to normal T cells. 30315241 2019
Entrez Id: 5970
Gene Symbol: RELA
RELA
0.010 Biomarker disease BEFREE Furthermore, higher phosphorylation of AKT and NF-κB p65 in IPF patient samples and murine samples was verified by immunohistochemistry while SAC could decrease the phosphorylation level of AKT and NF-κB p65 in mice stimulated with BLM. 30928090 2019
Entrez Id: 142
Gene Symbol: PARP1
PARP1
0.010 Biomarker disease BEFREE Therefore, selective inhibition of H<sub>4</sub>Rs together with non-toxic doses of selective PARP-1 inhibitors could have clinical relevance for the treatment of idiopathic pulmonary fibrosis. 31164820 2019
Entrez Id: 5476
Gene Symbol: CTSA
CTSA
0.010 Biomarker disease BEFREE Additionally, cathepsin A is increased in the AECII of aged LC3B<sup>-/-</sup> mice and in the lungs of patients with IPF. 31431059 2019
Entrez Id: 2113
Gene Symbol: ETS1
ETS1
0.010 AlteredExpression disease BEFREE Further, AP-1 and c-Ets-1 were upregulated in AECII under ER stress conditions and in human IPF. 31025089 2019
Entrez Id: 55014
Gene Symbol: STX17
STX17
0.010 Biomarker disease BEFREE Autophagosomal soluble <i>N</i>-ethylmaleimide-sensitive factor attachment protein receptor syntaxin 17 is increased in the AECII of aged LC3B<sup>-/-</sup> mice and patients with IPF. 31431059 2019
Entrez Id: 23198
Gene Symbol: PSME4
PSME4
0.010 Biomarker disease BEFREE Our data thus suggest an unexpected and important role for PA200 in adjusting myofibroblast activation in response to pro-fibrotic stimuli, which fails in idiopathic pulmonary fibrosis. 31645612 2019
Entrez Id: 80381
Gene Symbol: CD276
CD276
0.010 Biomarker disease BEFREE Notably, soluble B7H3 was elevated in plasma of patients with idiopathic pulmonary fibrosis and in BAL fluid in those with acute exacerbation. 31106564 2019
Entrez Id: 100500851
Gene Symbol: MIR3918
MIR3918
0.010 Biomarker disease BEFREE In addition, five potential altered microRNA-mRNA interactions were found, including hsa-miR-939-5p-<i>PLXNA4</i>, hsa-miR-3918-<i>CTIF</i>, hsa-miR-4768-5p-<i>PDE5A</i>, hsa-miR-1273g-3p-<i>VPS53</i>, and hsa-miR-1972-<i>PCSK9.</i> In summary, differentially expressed genes and microRNAs in response to EGCG treatment in IPF fibroblasts were identified in the current study. 31013581 2019
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.010 GeneticVariation disease BEFREE There were no significant differences in the collagen fiber scores of the AID-ILD and IPF groups. 30327882 2019
Entrez Id: 406932
Gene Symbol: MIR140
MIR140
0.010 AlteredExpression disease BEFREE Moreover, the expression of H19 was negatively correlated with the expression of miR-140 in IPF tissues. 30988156 2019
Entrez Id: 65125
Gene Symbol: WNK1
WNK1
0.010 Biomarker disease BEFREE Furthermore, higher phosphorylation of AKT and NF-κB p65 in IPF patient samples and murine samples was verified by immunohistochemistry while SAC could decrease the phosphorylation level of AKT and NF-κB p65 in mice stimulated with BLM. 30928090 2019
Entrez Id: 7037
Gene Symbol: TFRC
TFRC
0.010 Biomarker disease BEFREE <b>Measurements and Main Results:</b> There was a distinct increase in proportions of AMs lacking CD71 in patients with IPF compared with healthy control subjects. 31051082 2019
Entrez Id: 3099
Gene Symbol: HK2
HK2
0.010 Biomarker disease BEFREE Fibroblasts from patients with idiopathic pulmonary fibrosis (IPF) exhibited an increased abundance of HK2. 31848318 2019
Entrez Id: 4082
Gene Symbol: MARCKS
MARCKS
0.010 PosttranslationalModification disease BEFREE Treatment with the MPS peptide suppressed levels of MARCKS phosphorylation in primary IPF fibroblasts. 31661644 2019
Entrez Id: 4899
Gene Symbol: NRF1
NRF1
0.010 AlteredExpression disease BEFREE Mitochondria in AMs from IPF patients had prominent morphological defects and impaired transcription paralleled to a significant reduction of mitochondria homeostasis regulators PINK1, PARK2 and NRF1. mtROS, was significantly higher in IPF and associated with reduced expression of mitochondria-encoded oxidative phosphorylation (OXPHOS) genes. 31775876 2019
Entrez Id: 27178
Gene Symbol: IL37
IL37
0.010 AlteredExpression disease BEFREE In this study, we found that the IL-37 protein was expressed in alveolar epithelial cells (AECs) and alveolar macrophages in healthy controls but significantly reduced in patients with IPF. 31519861 2019
Entrez Id: 53831
Gene Symbol: GPR84
GPR84
0.010 Biomarker disease BEFREE In the case of GPR84, currently a target for the treatment of idiopathic pulmonary fibrosis, recent times have seen the description of novel orthosteric and allosteric agonists. 30755705 2019
Entrez Id: 3727
Gene Symbol: JUND
JUND
0.010 AlteredExpression disease BEFREE Further, AP-1 and c-Ets-1 were upregulated in AECII under ER stress conditions and in human IPF. 31025089 2019
Entrez Id: 192111
Gene Symbol: PGAM5
PGAM5
0.010 Biomarker disease BEFREE We speculated that phosphoglycerate mutase family member 5 (PGAM5), a mitochondrial protein at the intersection of multiple cell death and mitochondrial turnover pathways, might be involved in the pathogenesis of IPF. 31168659 2019
Entrez Id: 9365
Gene Symbol: KL
KL
0.010 Biomarker disease BEFREE Role of fibroblast growth factor 23 and klotho cross talk in idiopathic pulmonary fibrosis. 31042083 2019
Entrez Id: 22795
Gene Symbol: NID2
NID2
0.010 Biomarker disease BEFREE Collagens, proteoglycans, and ECM glycoproteins were increased in IPF scaffolds, however while specific basement membrane (BM) proteins such as laminins and collagen IV were decreased, nidogen-2 was also increased. 31426504 2019