Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 Biomarker disease BEFREE Hesperidin alleviates BLM-induced IPF via inhibition of TGF-β1/Smad3/AMPK and IκBα/NF-κB pathways which in turn ameliorate the modulation of oxido-inflammatory markers (Nrf2 and HO-1) and pro-inflammatory markers (TNF-α, IL-1β, and IL-6) to reduce collagen deposition during pulmonary fibrosis.See also Figure 1(Fig.1). 31611754 2019
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 AlteredExpression disease BEFREE Inhibition of PTPN13 function in primary IPF and normal lung (myo)fibroblasts was accomplished by: 1) downregulation with TNF-α (tumor necrosis factor-α)/IFN-γ, 2) siRNA knockdown, or 3) a cell-permeable Fas/PTPN13 interaction inhibitory peptide. 29727583 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 AlteredExpression disease BEFREE Primary human pulmonary fibroblasts (normal and IPF), fibrocytes, and epithelial cells were activated using the profibrotic factors TGF-β and TNF-α. 30091381 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 AlteredExpression disease BEFREE IPF sputum supernatants had increased concentrations of IGFBP-2, IL-8, TGF-β, MMP-7, MMP-9 and KL-6 (p<0.05, p<0.0001, p<0.05, p<0.05, p<0.0001, p<0.05 respectively) when compared to healthy subjects where COPD had higher IL-6 and TNF-α levels than IPF (p<0.05 and p<0.05 respectively) and HS (p<0.0001 and p<0.001 respectively) and higher IL-8 and MMP-9 than HS (p<0.0001 and p<0.001 respectively). 28178340 2017
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 Biomarker disease BEFREE We suggest a possible mechanism in which IPF fibroblast secreted TNF-α modifies neighboring fibroblast cell behavior. 28629363 2017
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 Biomarker disease BEFREE Notably, WISP1 is required for TGFβ1- and TNFα-dependent induction of interleukin 6 (IL-6), a mechanism that is conserved in IPF phLFs. 26867691 2016
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 GeneticVariation disease BEFREE The gene polymorphisms of HLA-A, -B, -DRB1, tumor necrosis factor alpha [TNF-α (-308 A/G)], transforming growth factor beta [TGF-β1 (+869 T/C)], interleukin 10 [IL-10 (-592 C/A, -819 T/C, and -1082 G/A)], and interferon gamma [IFN-γ (+874 T/A)] were detected in 102 individuals with IPF and 266 unrelated normal controls using PCR with sequence-specific primers and a high-resolution melt (HRM) approach. 26709222 2015
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 Biomarker disease BEFREE The production of sTNFR1 and 2 and TNF-α by macrophages in vitro was significantly increased in patients with COP compared to IPF and controls, spontaneously or with LPS stimulation (p < 0.05 or p < 0.01).There was a positive correlation between the spontaneous production of sTNFR2 and TNF-α (r = 0.494, p < 0.01). 21144722 2011
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 GeneticVariation disease BEFREE In 16 sarcoidosis, 7 idiopathic pulmonary fibrosis (IPF) and 8 hypersensitivity pneumonitis (HP) patients we evaluated IL-1 alpha, -1R, -1RA, -2, -4, -4R alpha, -6, -10, -12, IFN-gamma, TGF-beta1 and TNF-alpha gene polymorphisms in peripheral blood, and MCP-1,MIP-1 alpha, MIP-1 beta, RANTES, ENA-78, FGF, G-CSF, GM-CSF, IFN-gamma, IL-1 alpha, IL-1RA, IL-1 beta, -2, -4, -5, -6, -8, -10, -17, TNF-alpha, Tpo and VEGF values in BALF. 19117745 2009
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 GeneticVariation disease BEFREE We investigated 30 patients with idiopathic pulmonary fibrosis (IPF) and 103 healthy volunteers for the cytokines polymorphisms of the IL-1alpha, IL-1beta, IL-1R, IL-1RA, IL-2, IL-4, IL-6, IL-10, IL-12, tumor necrosis factor-alpha, interferon-gamma, transforming growth factor-beta, IL-1beta, IL-2, IL-4, and IL-4RA genes. 16573560 2006
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 Biomarker disease BEFREE These results suggest a primary detrimental role of soluble TNF in the pathologic cascade, separating it from the beneficial role of transmembrane TNF, and indicate the importance of assessing the efficacy of soluble TNF antagonists in the treatment of Idiopathic Pulmonary Fibrosis. 17205112 2006
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 GeneticVariation disease BEFREE To date, the genetic associations with IPF that have been reported in different cohorts include the genes encoding tumour necrosis factor (TNF; -308 adenine), interleukin-1 receptor antagonist (+2018 thymidine) and association with severity and progression (interleukin-6/TNF receptor II and transforming growth factor-beta1 (TGFB1; +869 cytosine)), but none of these associations have been replicated by others. 15863652 2005
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 GeneticVariation disease BEFREE This is the third study to independently confirm that there is a significant association of the TNF-alpha (-308 A) allele with IPF. 15030461 2004
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 GeneticVariation disease BEFREE Results from this study suggest that the 3' UTR region of TNF-alpha is highly conserved in IPF and mutation of this region is unlikely to be involved in the pathogenesis of IPF. 11282543 2001
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 GeneticVariation disease BEFREE Increased risk of fibrosing alveolitis associated with interleukin-1 receptor antagonist and tumor necrosis factor-alpha gene polymorphisms. 10934117 2000
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 Biomarker disease BEFREE However, transforming growth factor beta 1 (TGF-beta 1) protein decreased, which is closely associated with prolonged TNF-alpha synthesis, resulting in development of chronic inflammation and less severe fibrosis in the lungs of this animal model, analogous to inflammatory stage of human IPF. 9512902 1998
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 AlteredExpression disease BEFREE Enhanced IL-1 beta and tumor necrosis factor-alpha release and messenger RNA expression in macrophages from idiopathic pulmonary fibrosis or after asbestos exposure. 8473757 1993
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 Biomarker disease BEFREE An elevated concentration of tumor necrosis factor = alpha, particularly within the alveolar epithelium, might contribute to the alveolar damage and proliferation of interstitial cells in idiopathic pulmonary fibrosis. 8362967 1993
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.300 Biomarker disease MGD