Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1436
Gene Symbol: CSF1R
CSF1R
0.040 AlteredExpression disease BEFREE Expression of the human c-fms proto-oncogene in hematopoietic cells and its deletion in the 5q- syndrome. 4028159 1985
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.010 Biomarker disease BEFREE The GM-CSF gene was localized by somatic cell hybrid analysis and in situ hybridization to human chromosome region 5q21-5q32, which is involved in interstitial deletions in the 5q- syndrome and acute myelogenous leukemia. 2999978 1985
Entrez Id: 3562
Gene Symbol: IL3
IL3
0.010 Biomarker disease BEFREE Southern blot analysis of somatic cell hybrids retaining the normal or the deleted chromosome 5 from two patients with the refractory anemia 5q- syndrome indicated that IL-3 sequences were absent form the hybrids retaining the deleted chromosome 5 but not from hybrids that had a cytologically normal chromosome 5. 3497400 1987
Entrez Id: 3567
Gene Symbol: IL5
IL5
0.010 Biomarker disease BEFREE Interleukin-5 is at 5q31 and is deleted in the 5q- syndrome. 3258537 1988
Entrez Id: 1436
Gene Symbol: CSF1R
CSF1R
0.040 GeneticVariation disease BEFREE Dosage analysis at the CSF1 and CSF1R loci in a new case of partial trisomy 5q. 1606715 1992
Entrez Id: 1436
Gene Symbol: CSF1R
CSF1R
0.040 GeneticVariation disease BEFREE Moreover, homozygous deletion of the FMS gene may be an important event in the genesis of the MDS variant 5q- syndrome. 1613006 1992
Entrez Id: 1435
Gene Symbol: CSF1
CSF1
0.010 GeneticVariation disease BEFREE Dosage analysis at the CSF1 and CSF1R loci in a new case of partial trisomy 5q. 1606715 1992
Entrez Id: 3659
Gene Symbol: IRF1
IRF1
0.010 Biomarker disease BEFREE We conclude that IRF1 maps outside the commonly deleted segment of the 5q- chromosome and that loss of IRF1 is not solely responsible for the development of the 5q- syndrome. 8219215 1993
Entrez Id: 4254
Gene Symbol: KITLG
KITLG
0.010 Biomarker disease BEFREE c-kit ligand augments granulocyte-macrophage colony growth from patients with 5q- syndrome. 7509225 1993
Entrez Id: 3161
Gene Symbol: HMMR
HMMR
0.010 GeneticVariation disease BEFREE The map position of the human RHAMM gene places it in a region comparatively rich in disease-associated genes, including those for low-frequency hearing loss, dominant limb-girdle muscular dystrophy, diastrophic dysplasia, Treacher Collins syndrome, and myeloid disorders associated with the 5q- syndrome. 8595891 1995
Entrez Id: 2056
Gene Symbol: EPO
EPO
0.010 Biomarker disease BEFREE The outcome in this child was poor, which may reflect a difference from the adult 5q- syndrome or may possibly be related to the erythropoietin the child received. 7736428 1995
Entrez Id: 2149
Gene Symbol: F2R
F2R
0.020 Biomarker disease BEFREE Since thrombin has putative effects on the growth and differentiation of megakaryocytes, we hypothesized that the phenotypic abnormalities in megakaryocytopoiesis observed in the 5q- syndrome may be partially explained by involvement of the TR gene in the interstitial deletion. 8602997 1996
Entrez Id: 1436
Gene Symbol: CSF1R
CSF1R
0.040 GeneticVariation disease BEFREE Allelic loss of the FMS gene occurs in patients with refractory anaemia and the 5q- syndrome associated with the myelodysplastic syndromes. 9403002 1997
Entrez Id: 2246
Gene Symbol: FGF1
FGF1
0.020 Biomarker disease BEFREE Using molecular mapping techniques, we have previously defined the critical region of gene loss of the 5q- chromosome in the 5q- syndrome as the approximately 5-Mb region at 5q31-q33 flanked by the genes for FGF1 and IL12B. 9339364 1997
Entrez Id: 2149
Gene Symbol: F2R
F2R
0.020 Biomarker disease BEFREE The human thrombin receptor gene and the 5q-syndrome. 9373191 1997
Entrez Id: 3593
Gene Symbol: IL12B
IL12B
0.020 Biomarker disease BEFREE Using molecular mapping techniques, we have previously defined the critical region of gene loss of the 5q- chromosome in the 5q- syndrome as the approximately 5-Mb region at 5q31-q33 flanked by the genes for FGF1 and IL12B. 9339364 1997
Entrez Id: 2246
Gene Symbol: FGF1
FGF1
0.020 Biomarker disease BEFREE We have previously delineated a common deleted region of 5.6 Mb between the gene for fibroblast growth factor acidic (FGF1) and the subunit of interleukin 12 (IL12B) in two patients with 5q- syndrome and small deletions, del(5)(q31q33). 9624537 1998
Entrez Id: 3593
Gene Symbol: IL12B
IL12B
0.020 GeneticVariation disease BEFREE We have previously delineated a common deleted region of 5.6 Mb between the gene for fibroblast growth factor acidic (FGF1) and the subunit of interleukin 12 (IL12B) in two patients with 5q- syndrome and small deletions, del(5)(q31q33). 9624537 1998
Entrez Id: 6678
Gene Symbol: SPARC
SPARC
0.050 GeneticVariation disease BEFREE Physical mapping of the human ATX1 homologue (HAH1) to the critical region of the 5q- syndrome within 5q32, and immediately adjacent to the SPARC gene. 10982193 2000
Entrez Id: 475
Gene Symbol: ATOX1
ATOX1
0.010 Biomarker disease BEFREE Genomic localisation, function and expression would suggest that the HAH1 gene represents a candidate gene for the 5q-syndrome. 10982193 2000
Entrez Id: 6310
Gene Symbol: ATXN1
ATXN1
0.010 GeneticVariation disease BEFREE Physical mapping of the human ATX1 homologue (HAH1) to the critical region of the 5q- syndrome within 5q32, and immediately adjacent to the SPARC gene. 10982193 2000
Entrez Id: 1958
Gene Symbol: EGR1
EGR1
0.020 GeneticVariation disease BEFREE A commercial LSI EGR1 probe (Vysis Inc.) for the 5q31 band was used simultaneously in dual-color experiments with a chromosome-5-centromeric probe (Vysis Inc.) on BM smears from 8 patients with the 5q-syndrome. 11325642 2001
Entrez Id: 2741
Gene Symbol: GLRA1
GLRA1
0.020 GeneticVariation disease BEFREE We describe the narrowing of the common deleted region (CDR) of the 5q- syndrome to the approximately 1.5-megabases interval at 5q32 flanked by D5S413 and the GLRA1 gene. 12036901 2002
Entrez Id: 308
Gene Symbol: ANXA5
ANXA5
0.010 AlteredExpression disease BEFREE We found lower levels of apoptosis in 5q-syndrome as detected by less disruption of mitochondrial potential (P=0.008) and decreased annexin V positivity (P=0.01). 12163050 2002
Entrez Id: 5917
Gene Symbol: RARS1
RARS1
0.030 Biomarker disease BEFREE In patients with early disease, only 2 out of 11 patients (18%) with RA or RARS, according to WHO classification, had clonal granulocytes and CD14(+) cells in peripheral blood and bone marrow and 2 other patients with 5q-syndrome exhibited extremely oligoclonal granulocyte subpopulation in bone marrow. 15725470 2005