Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 GeneticVariation disease BEFREE Thus, the brachydactyly type A2 phenotype (L441P) is caused by inhibition of the ligand-receptor interaction, whereas the symphalangism phenotype (R438L) is caused by a loss of receptor-binding specificity, resulting in a gain of function by the acquisition of BMP2-like properties. 16127465 2005
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 GermlineCausalMutation disease ORPHANET Our results reveal an additional functional mechanism for the pathogenesis of BDA2, which is duplication of a regulatory element that affects the expression of BMP2 in the developing limb. 19327734 2009
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 Biomarker disease HPO
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 GeneticVariation disease BEFREE The duplication narrows the range of the potential cis-regulatory sequence, and further supports the association between BDA2 and the duplication downstream BMP2. 29129813 2018
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 Biomarker disease CTD_human
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 Biomarker disease GENOMICS_ENGLAND Monoallelic BMP2 Variants Predicted to Result in Haploinsufficiency Cause Craniofacial, Skeletal, and Cardiac Features Overlapping Those of 20p12 Deletions. 29198724 2017
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 AlteredExpression disease BEFREE GDF5 is a novel BDA2 causing gene.It is suggested that impaired activity of BMPR1B is the molecular mechanism responsible for the BDA2 phenotype. 16014698 2006
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 AlteredExpression disease BEFREE Our results reveal an additional functional mechanism for the pathogenesis of BDA2, which is duplication of a regulatory element that affects the expression of BMP2 in the developing limb. 19327734 2009
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 GermlineCausalMutation disease ORPHANET In summary, our findings support the conclusions that BMP2 is the causing gene for BDA2, that the genomic location corresponding to the duplication region is prone to structural changes associated with malformation of the digits, and that this tendency is probably caused by the abundance of microhomologous sequences in the region. 24710560 2014
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 Biomarker disease GENOMICS_ENGLAND The duplication narrows the range of the potential cis-regulatory sequence, and further supports the association between BDA2 and the duplication downstream BMP2. 29129813 2018
Entrez Id: 650
Gene Symbol: BMP2
BMP2
0.750 Biomarker disease BEFREE In summary, our findings support the conclusions that BMP2 is the causing gene for BDA2, that the genomic location corresponding to the duplication region is prone to structural changes associated with malformation of the digits, and that this tendency is probably caused by the abundance of microhomologous sequences in the region. 24710560 2014
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 GeneticVariation disease UNIPROT Functional investigations of the R486Q mutation were performed and compared with the previously reported BDA2-causing mutation R486W and WT BMPR1B. 16957682 2006
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 CausalMutation disease CLINVAR
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 GeneticVariation disease BEFREE They cause brachydactyly type A2 (L441P) and symphalangism (R438L), conditions previously associated with mutations in the GDF5 receptor bone morphogenetic protein receptor type 1b (BMPR1B) and the BMP antagonist NOGGIN, respectively. 16127465 2005
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 GeneticVariation disease BEFREE This mutation is expected to result in a loss of function and is thus different from the heterozygous missense mutations in BMPR1B recently shown to cause brachydactyly type A2 through a dominant negative effect. 15805157 2005
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 GeneticVariation disease UNIPROT Mutations in bone morphogenetic protein receptor 1B cause brachydactyly type A2. 14523231 2003
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 Biomarker disease GENOMICS_ENGLAND Brachydactyly type A2 associated with a defect in proGDF5 processing. 18203755 2008
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 Biomarker disease HPO
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 Biomarker disease GENOMICS_ENGLAND
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 GeneticVariation disease BEFREE Functional investigations of the R486Q mutation were performed and compared with the previously reported BDA2-causing mutation R486W and WT BMPR1B. 16957682 2006
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 GermlineCausalMutation disease ORPHANET Mutations in bone morphogenetic protein receptor 1B cause brachydactyly type A2. 14523231 2003
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 GeneticVariation disease BEFREE Autosomal-dominant brachydactyly type A2 (BDA2), a limb malformation characterized by hypoplastic middle phalanges of the second and fifth fingers, has been shown to be due to mutations in the Bone morphogenetic protein receptor 1B (BMPR1B) or in its ligand Growth and differentiation factor 5 (GDF5). 19327734 2009
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 AlteredExpression disease BEFREE GDF5 is a novel BDA2 causing gene.It is suggested that impaired activity of BMPR1B is the molecular mechanism responsible for the BDA2 phenotype. 16014698 2006
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 GeneticVariation disease BEFREE In contrast, dominant-negative BMPR1B mutations described previously are associated with autosomal-dominant brachydactyly-type A2. 24129431 2014
Entrez Id: 658
Gene Symbol: BMPR1B
BMPR1B
0.760 Biomarker disease CTD_human