Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4878
Gene Symbol: NPPA
NPPA
0.020 Biomarker disease BEFREE In particular, NPPA appears to be a good candidate gene for conotruncal defects and warrants further investigation. 16100725 2005
Entrez Id: 6495
Gene Symbol: SIX1
SIX1
0.010 Biomarker disease BEFREE In Silico Analyses Reveal the Relationship Between SIX1/EYA1 Mutations and Conotruncal Heart Defects. 29043394 2018
Entrez Id: 2657
Gene Symbol: GDF1
GDF1
0.010 Biomarker disease BEFREE In summary, our results provide evidence that genetic variations of the Nodal-like factor, GDF1 may be associated with CHD risk, and these variations contribute at least in part to the development of some subtypes of CTD in the Chinese Han population. 23076529 2013
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.070 GeneticVariation disease BEFREE Maternal functional variants in MTHFR gene may interact with dietary folate intake and modify the conotruncal defects risk in the offspring. 22495907 2012
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.070 GeneticVariation disease BEFREE Mice heterozygous for a null mutation in Tbx1 develop conotruncal defects. 11239417 2001
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.070 Biomarker disease BEFREE Microdeletions/duplications involving TBX1 gene in fetuses with conotruncal heart defects which are negative for 22q11.2 deletion on fluorescence in-situ hybridization. 23828768 2014
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.070 Biomarker disease BEFREE Molecular studies have shown microdeletions in region q11 of chromosome 22 in nearly all patients with DiGeorge, velocardiofacial and conotruncal anomaly face syndromes (DGS, VCFS and CTAFS, respectively) and in a high percentage of non-syndromic familial cases of conotruncal defects (CTD). 8566942 1996
Entrez Id: 1714
Gene Symbol: DGCR
DGCR
0.010 Biomarker disease BEFREE Molecular studies have shown microdeletions in region q11 of chromosome 22 in nearly all patients with DiGeorge, velocardiofacial and conotruncal anomaly face syndromes (DGS, VCFS and CTAFS, respectively) and in a high percentage of non-syndromic familial cases of conotruncal defects (CTD). 8566942 1996
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.070 GeneticVariation disease BEFREE Moreover, the MTHFR C677T, MTHFR A1298C, and MTRR A66G polymorphisms were found to be significantly associated with the risk of certain subtypes of CTD. 30165839 2018
Entrez Id: 4552
Gene Symbol: MTRR
MTRR
0.010 GeneticVariation disease BEFREE Moreover, the MTHFR C677T, MTHFR A1298C, and MTRR A66G polymorphisms were found to be significantly associated with the risk of certain subtypes of CTD. 30165839 2018
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.070 GeneticVariation disease BEFREE Novel TBX1 loss-of-function mutation causes isolated conotruncal heart defects in Chinese patients without 22q11.2 deletion. 24998776 2014
Entrez Id: 4257
Gene Symbol: MGST1
MGST1
0.010 GeneticVariation disease BEFREE One SNP pair (i.e., rs4764267 and rs6556883) located in gene MGST1 and GLRX, respectively, was found to be associated with CTD risk after multiple testing adjustment using simpleM, a modified Bonferroni correction approach (nominal p-value of 4.62e-06; adjusted p-value of .04). 31851787 2020
Entrez Id: 2745
Gene Symbol: GLRX
GLRX
0.020 GeneticVariation disease BEFREE One SNP pair (i.e., rs4764267 and rs6556883) located in gene MGST1 and GLRX, respectively, was found to be associated with CTD risk after multiple testing adjustment using simpleM, a modified Bonferroni correction approach (nominal p-value of 4.62e-06; adjusted p-value of .04). 31851787 2020
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.010 GeneticVariation disease BEFREE Our findings suggest that TGFβ1 rs1800469 C>T polymorphism was significantly associated with decreased risk of conotruncal heart defects. 24443223 2014
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.070 GeneticVariation disease BEFREE Our results indicate that TBX1 genetic variants may be associated with CTDs. 22185286 2011
Entrez Id: 6909
Gene Symbol: TBX2
TBX2
0.010 GeneticVariation disease BEFREE Our results indicate that the R608W and R616Q variants of TBX2 as well as the A192T and A562V variants of TBX3 contribute to CTD etiology; this was the first association of variants of TBX2 and TBX3 to CTDs based on a large population. 30223900 2018
Entrez Id: 6926
Gene Symbol: TBX3
TBX3
0.010 GeneticVariation disease BEFREE Our results indicate that the R608W and R616Q variants of TBX2 as well as the A192T and A562V variants of TBX3 contribute to CTD etiology; this was the first association of variants of TBX2 and TBX3 to CTDs based on a large population. 30223900 2018
Entrez Id: 6573
Gene Symbol: SLC19A1
SLC19A1
0.010 GeneticVariation disease BEFREE Subjects carrying both variant genotypes of MTHFR A1298C and SLC19A1 G80A had a higher (3.23 [1.71-6.02], p = 0.0002) increased risk for CTDs. 30165839 2018
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.010 GeneticVariation disease BEFREE TGFβR2 rs3087465 G>A, VEGF -2578C>A, -1498T>C, -634G>C and +936C>T polymorphisms may not play a role in the susceptibility of conotruncal heart defects. 24443223 2014
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.070 GeneticVariation disease BEFREE The A1298C Methylenetetrahydrofolate Reductase Gene Variant as a Susceptibility Gene for Non-Syndromic Conotruncal Heart Defects in an Indian Population. 25981563 2015
Entrez Id: 4522
Gene Symbol: MTHFD1
MTHFD1
0.020 GeneticVariation disease BEFREE The A allele of MTHFD1 rs11627387 was associated with a 1.7-fold increase in conotruncal defects risk in both Hispanic mothers (OR = 1.7, 95% CI = 1.1-2.5) and Hispanic infants (OR = 1.7, 95% CI = 1.2-2.3). 22495907 2012
Entrez Id: 4548
Gene Symbol: MTR
MTR
0.020 Biomarker disease BEFREE The above mentioned associations of MTR with CHDs were also observed in septal defects and conotruncal heart defects subgroups. 30911047 2019
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
0.020 GeneticVariation disease BEFREE The current study presents two novel GATA6 mutations in patients with nonsyndromic conotruncal heart defects and provides novel insights into the pathogenesis of this disease. 24841381 2014
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.070 GeneticVariation disease BEFREE The maternal MTHFR 677C > T variants are a risk factor for CHD in offspring, confined to conotruncal heart defects. 16524890 2006
Entrez Id: 27306
Gene Symbol: HPGDS
HPGDS
0.010 GeneticVariation disease BEFREE The maternal genotypes of several variants in the glutathione-S-transferase (GST) family of genes and the fetal genotypes of the variants in the GCLC gene interacted with tobacco exposures to increase the risk of CTDs. 25275547 2014