Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 51
Gene Symbol: ACOX1
ACOX1
0.010 Biomarker disease BEFREE Although expression of hepatic genes associated with lipogenesis and TG hydrolysis was not changed, the mRNAs encoding enzymes/proteins involved in FA oxidation (carnitine palmitoyl-CoA transferase 1α, medium- and very-long-chain acyl-CoA dehydrogenases, and acyl-CoA oxidase 1), very-low-density lipoprotein secretion (microsomal TG transfer protein), and FA transport (CD36 and FA-binding protein 1), were markedly suppressed in CTLN2 patients. 25533124 2015
Entrez Id: 174
Gene Symbol: AFP
AFP
0.020 AlteredExpression disease BEFREE It also emphasizes the necessity of monitoring AFP levels during follow-up for citrin deficiency patients with persistently high AFP level after treatment as FTTDCD may progress to HCC. 31620407 2019
Entrez Id: 174
Gene Symbol: AFP
AFP
0.020 AlteredExpression disease BEFREE All cases revealed high levels of alpha-fetoprotein, which are not observed in CTLN2 patients. 12424587 2002
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 Biomarker disease BEFREE Adult-onset type II citrullinemia (CTLN2) is characterized by a liver-specific deficiency of argininosuccinate synthetase (ASS) protein. 11153906 2000
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 AlteredExpression disease BEFREE CTLN2 is one of the urea cycle disorders characterized by sudden-onset hyperammonemia due to reduced argininosuccinate synthase activity. 25533124 2015
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 AlteredExpression disease BEFREE Secondary decrease in hepatic argininosuccinate synthetase (ASS1) expression has been considered a cause of hyperammonemia in CTLN2. 29651749 2018
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 AlteredExpression disease BEFREE Surprisingly, Ctrn-/- mice up to 1 year of age failed to show CTLN2-like symptoms due to normal hepatic ASS activity. 14701727 2004
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 GeneticVariation disease BEFREE Type II citrullinaemia (CTLN2) is an adult- or late childhood-onset liver disease characterized by a liver-specific defect in argininosuccinate synthetase protein. 11999983 2002
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 GeneticVariation disease BEFREE Recent results of homozygosity testing indicate that the primary defect of type II citrullinemia is not within the ASS gene locus. 7556646 1995
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 AlteredExpression disease BEFREE Adult-onset type II citrullinemia (CTLN2), characterized by a liver-specific deficiency of urea cycle enzyme, argininosuccinate synthetase, is caused by mutations in SLC25A13 that encodes a calcium binding mitochondrial solute carrier protein, citrin. 12602510 2002
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 Biomarker disease BEFREE It is, however, still difficult to understand the cause of the hepatic deficiency of argininosuccinate synthetase protein in CTLN2. 12111366 2002
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 Biomarker disease BEFREE CTLN2 differs from classical citrullinaemia (CTLN1, OMIM 215700) in that CTLN1 is neonatal or infantile in onset, with ASS enzyme defects (in all tissues) arising due to mutations in ASS on chromosome 9q34 (refs 18-21). 10369257 1999
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 Biomarker disease BEFREE Type II citrullinemia (CTLN2) is characterized by a deficiency of argininosuccinate synthetase (ASS) in the liver. 12512993 2002
Entrez Id: 445
Gene Symbol: ASS1
ASS1
0.100 GeneticVariation disease BEFREE Adult-onset type II citrullinemia (CTLN2) is a form of the disease that is defined by a quantitative decrease in ASS protein, but with normal kinetic properties. 10610724 1999
Entrez Id: 6366
Gene Symbol: CCL21
CCL21
0.010 GeneticVariation disease BEFREE Interestingly, population-specific carrier frequencies of loss-of-function variants in SLC genes associated with recessive Mendelian disease recapitulated the ethnogeographic variation of the corresponding disorders, including cystinuria in Jewish individuals, type II citrullinemia in East Asians, and lysinuric protein intolerance in Finns, thus providing a powerful resource for clinical geneticists to inform about population-specific prevalence and allelic composition of Mendelian SLC diseases. 31679053 2019
Entrez Id: 948
Gene Symbol: CD36
CD36
0.010 Biomarker disease BEFREE Although expression of hepatic genes associated with lipogenesis and TG hydrolysis was not changed, the mRNAs encoding enzymes/proteins involved in FA oxidation (carnitine palmitoyl-CoA transferase 1α, medium- and very-long-chain acyl-CoA dehydrogenases, and acyl-CoA oxidase 1), very-low-density lipoprotein secretion (microsomal TG transfer protein), and FA transport (CD36 and FA-binding protein 1), were markedly suppressed in CTLN2 patients. 25533124 2015
Entrez Id: 2820
Gene Symbol: GPD2
GPD2
0.010 Biomarker disease BEFREE The C57BL/6:Slc23a13(-/-);Gpd2(-/-) double-knockout (a.k.a., citrin/mitochondrial glycerol 3-phosphate dehydrogenase double knockout or Ctrn/mGPD-KO) mouse displays phenotypic attributes of both neonatal intrahepatic cholestasis (NICCD) and adult-onset type II citrullinemia (CTLN2), making it a suitable model of human citrin deficiency. 22921887 2012
Entrez Id: 5599
Gene Symbol: MAPK8
MAPK8
0.010 AlteredExpression disease BEFREE Additionally, phosphorylation of c-Jun-N-terminal kinase was enhanced in CTLN2 livers, which was likely associated with lower hepatic PPARα. 25533124 2015
Entrez Id: 5465
Gene Symbol: PPARA
PPARA
0.010 AlteredExpression disease BEFREE Collectively, down-regulation of PPARα is associated with steatogenesis in CTLN2 patients. 25533124 2015
Entrez Id: 6554
Gene Symbol: SLC10A1
SLC10A1
0.010 AlteredExpression disease BEFREE The findings in this paper indicated that NTCP deficiency could be covered up by citrin deficiency during early infancy; however, in citrin-deficient patients with intractable hypercholanemia following resolved cholestatic jaundice, NTCP deficiency should be taken into consideration. 31788003 2019
Entrez Id: 8604
Gene Symbol: SLC25A12
SLC25A12
0.010 GeneticVariation disease BEFREE These results demonstrate that citrin and aralar1 are isoforms of the hitherto unidentified aspartate/glutamate carrier and explain why mutations in citrin cause type II citrullinemia in humans. 11566871 2001
Entrez Id: 10165
Gene Symbol: SLC25A13
SLC25A13
0.700 CausalMutation disease CLINVAR A novel mutation of the SLC25A13 gene in a Chinese patient with citrin deficiency detected by target next-generation sequencing. 24161253 2014
Entrez Id: 10165
Gene Symbol: SLC25A13
SLC25A13
0.700 GeneticVariation disease BEFREE Citrin is a liver-type mitochondrial aspartate-glutamate carrier encoded by the SLC25A13 gene, and its deficiency causes adult-onset type II citrullinemia and neonatal intrahepatic cholestasis caused by citrin deficiency (NICCD). 18162705 2007
Entrez Id: 10165
Gene Symbol: SLC25A13
SLC25A13
0.700 GeneticVariation disease BEFREE Screening for five prevalent mutations of SLC25A13 gene in Guangdong, China: a molecular epidemiologic survey of citrin deficiency. 25110155 2014
Entrez Id: 10165
Gene Symbol: SLC25A13
SLC25A13
0.700 CausalMutation disease CLINVAR [SLC25A13 gene mutation analysis in a pedigree of neonatal intrahepatic cholestasis caused by citrin deficiency]. 17880783 2007