Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7057
Gene Symbol: THBS1
THBS1
0.010 Biomarker disease BEFREE TSP-1<sup>-/-</sup> AOM-treated mice had a reduced rate of neurologic decline, less cerebral edema, and a decrease in microglia activation in comparison with C57Bl/6 mice treated with AOM. 31734229 2020
Entrez Id: 652
Gene Symbol: BMP4
BMP4
0.010 GeneticVariation disease BEFREE A novel heterozygous BMP4 variant causing a premature stop codon, c. 130G>T, p.(Gly44Ter), which segregated with clinical features of Stickler syndrome in multiple family members, was identified. 30568244 2019
Entrez Id: 553195
Gene Symbol: MYP10
MYP10
0.010 Biomarker disease BEFREE Of those patients, 67 (29%) had TRD (retinopathy of prematurity, persistent fetal vasculature, or familial exudative vitreoretinopathy), 51 (22%) had rhegmatogenous retinal detachment (myopia, X-linked retinoschisis, or Stickler syndrome), 60 (26%) had traumatic RD, and 53 (23%) were due to other types of RD, such as Coats disease or coloboma. 28858062 2018
Entrez Id: 1268
Gene Symbol: CNR1
CNR1
0.010 AlteredExpression disease BEFREE The anti-proliferative and pro-apoptotic effects of quercetin in AOM-treated mice are mediated by induction of the protein and gene expression levels of CB1-R. 30061214 2018
Entrez Id: 5362
Gene Symbol: PLXNA2
PLXNA2
0.010 Biomarker disease BEFREE To determine the microstructure of the fovea in patients with Stickler syndrome using imaging by spectral-domain optical coherence tomography (SD OCT) and swept-source OCT. 28283280 2017
Entrez Id: 9314
Gene Symbol: KLF4
KLF4
0.010 Biomarker disease BEFREE Compared with AOM-treated Klf4 (fl/fl)mice, adenomas of treated Klf4 (ΔIS) mice had suppressed NHEJ and HRR mechanisms, as indicated by reduced Ku70 and Rad51 staining. 26839262 2016
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.010 Biomarker disease BEFREE Further, the expression levels of PKC-β2, AKT, COX-2 and iNOS in the colonic mucosa of AOM-treated mice were significantly decreased by fidarestat. 25218594 2014
Entrez Id: 107075310
Gene Symbol: MTCO2P12
MTCO2P12
0.010 Biomarker disease BEFREE Further, the expression levels of PKC-β2, AKT, COX-2 and iNOS in the colonic mucosa of AOM-treated mice were significantly decreased by fidarestat. 25218594 2014
Entrez Id: 4036
Gene Symbol: LRP2
LRP2
0.010 GeneticVariation disease BEFREE Broadening the phenotype of LRP2 mutations: a new mutation in LRP2 causes a predominantly ocular phenotype suggestive of Stickler syndrome. 23992033 2014
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.010 Biomarker disease BEFREE Further, the expression levels of PKC-β2, AKT, COX-2 and iNOS in the colonic mucosa of AOM-treated mice were significantly decreased by fidarestat. 25218594 2014
Entrez Id: 24147
Gene Symbol: FJX1
FJX1
0.010 Biomarker disease BEFREE Furthermore, FJX1 null mice develop significantly fewer colonic polyps than wild-type littermates after combined dextran sodium sulfate (DSS) and azoxymethane (AOM) treatment. 23922772 2013
Entrez Id: 7007
Gene Symbol: TECTA
TECTA
0.010 Biomarker disease BEFREE The results of the psychophysical measurements were similar to those previously published for DFNA8/12 (TECTA) and DFNA13 (COL11A2) patients and thus consistent with an intra-cochlear conductive hearing impairment. 22796475 2012
Entrez Id: 7486
Gene Symbol: WRN
WRN
0.010 GeneticVariation disease BEFREE In this study, we evaluated the utility of CHIPS technology for genetic diagnosis in clinical practice by applying this system to screening for the COL2A1, WRN and RPS6KA3 mutations in newly diagnosed patients with Stickler syndrome (autosomal dominant inheritance), Werner syndrome (autosomal recessive inheritance) and Coffin-Lowry syndrome (X-linked inheritance), respectively. 23022073 2012
Entrez Id: 6197
Gene Symbol: RPS6KA3
RPS6KA3
0.010 GeneticVariation disease BEFREE In this study, we evaluated the utility of CHIPS technology for genetic diagnosis in clinical practice by applying this system to screening for the COL2A1, WRN and RPS6KA3 mutations in newly diagnosed patients with Stickler syndrome (autosomal dominant inheritance), Werner syndrome (autosomal recessive inheritance) and Coffin-Lowry syndrome (X-linked inheritance), respectively. 23022073 2012
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.010 Biomarker disease BEFREE Zik1 and Gja9 demonstrated cancer-specific aberrant DNA methylation, whereas, Cdkn2a/p16, Igfbp3, Mgmt, Id4, and Cxcr4 were methylated in both the AOM tumors and normal colon mucosa. 19777566 2010
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.010 Biomarker disease BEFREE Finally, p19(Arf), Tslc1, Hltf, and Mlh1 were unmethylated in both the AOM tumors and normal colon mucosa. 19777566 2010
Entrez Id: 4680
Gene Symbol: CEACAM6
CEACAM6
0.010 AlteredExpression disease BEFREE Cell surface expression of CEA and CEACAM6 increased by 2- and 20-fold, respectively, in colonocytes from the tumors relative to colonocytes from non-AOM treated transgenics and a de-regulated spatial pattern of CEA/CEACAM6 expression was found in 'normal' crypts adjacent to the tumors, thus mimicking closely the situation in human colon tumorigenesis. 16632476 2006
Entrez Id: 1048
Gene Symbol: CEACAM5
CEACAM5
0.010 AlteredExpression disease BEFREE Cell surface expression of CEA and CEACAM6 increased by 2- and 20-fold, respectively, in colonocytes from the tumors relative to colonocytes from non-AOM treated transgenics and a de-regulated spatial pattern of CEA/CEACAM6 expression was found in 'normal' crypts adjacent to the tumors, thus mimicking closely the situation in human colon tumorigenesis. 16632476 2006
Entrez Id: 7535
Gene Symbol: ZAP70
ZAP70
0.010 GeneticVariation disease BEFREE The classical phenotypes include the spondyloepiphyseal dysplasia (SED) spectrum with variable severity, Stickler dysplasia type I (STD-I), and Kniest dysplasia (KND). 15895462 2005
Entrez Id: 6822
Gene Symbol: SULT2A1
SULT2A1
0.010 GeneticVariation disease BEFREE The classical phenotypes include the spondyloepiphyseal dysplasia (SED) spectrum with variable severity, Stickler dysplasia type I (STD-I), and Kniest dysplasia (KND). 15895462 2005
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.010 AlteredExpression disease BEFREE In the azoxymethane (AOM) treated rats, overexpression and nuclear localization of beta-catenin was observed in all adenomas. 9600336 1998
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.050 Biomarker disease BEFREE Patients with COL9A1-associated Stickler syndrome (STL) present hearing loss (HL), ophthalmic manifestations and skeletal abnormalities. 31315069 2019
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.050 GeneticVariation disease BEFREE Rare recessive forms of Stickler syndrome exist that are due to mutations in genes encoding type IX collagen (COL9A1 type 4 Stickler syndrome and COL9A2 type 5 Stickler syndrome). 23922384 2013
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.050 GeneticVariation disease BEFREE Although the overall phenotype was comparable to autosomal dominant Stickler, vitreous changes that may enable recognition of patients who are likely to carry mutations in COL9A1 were identified, and exudative retinal detachment was observed as a new finding in Stickler syndrome. 21421862 2011
Entrez Id: 1297
Gene Symbol: COL9A1
COL9A1
0.050 GeneticVariation disease BEFREE A family with autosomal recessive Stickler syndrome was previously described and found to have a homozygous loss-of-function mutation in COL9A1. 21671392 2011